Salvelinus sp. IW2-2015 (Arctic char): 111973875
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Entry
111973875 CDS
T05762
Name
(RefSeq) BDNF/NT-3 growth factors receptor-like isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111973875
04020 Calcium signaling pathway
111973875
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111973875
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111973875
Protein kinases [BR:
salp01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
111973875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
LRR_8
Ig_2
C2-set_2
LRRCT_2
LRR_5
ig
LRRNT
BiPBP_C
ICAM_N
Ig_5
V-set
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
111973875
NCBI-ProteinID:
XP_023857080
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All DBs
Position
LG15:10833326..10907888
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AA seq
471 aa
AA seq
DB search
MSAFRRGSWVSLLELCWVLMGLWRLGAACPASCSCSGTRIACVDQERGIMAFPVLQSELE
MDNITDIYIANQSSFSSINDKDLHYYRNLTNLTVTNSRLTYVSRLAFQNNLKLQYLNLKD
NNLSSLYWRIFRHLNISNLILSGNPLHCSCENMWMKLWLGEEADVQELKCIEEGGGRKPL
TRLNPPHCVVPMATLSPSKVTVQEGADVVLTCNTSGAPSPELIWNMTPLVSYNEIEASGQ
VSELHLYNLSSLDNNCKITCSAENIVGENESSVFLDILFPPNISKLSDAYSDHHWCIPFS
MSGNPKPDLRWLLNGEPVNEGPYIMTMIHDFSEREYHGCLQLDSPTHINNGPYTLLASNK
YGQDRKTVEAHFMLDPFDGGTVTEPLYYDPTTGICGRRDCSSSLHGFSIDAGHLEIRGKL
KVWNQRAHLGPVPFLPSWTSLAPCTTFLGICTEQGPWFHRSPEDHRHNGDE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctttcggaggggtagctgggtgtctctgttggagttgtgttgggtattaatg
ggactgtggaggctcggggccgcctgtcctgcgtcctgctcctgcagcgggaccaggatc
gcctgtgtggaccaggagcggggcatcatggctttcccagtgctgcagtctgagctggag
atggacaacatcacggacatatatattgcaaatcagagtagcttctcatccatcaatgac
aaagacctgcattattaccggaacctcacgaatctaactgtgactaacagcaggcttacc
tatgtctctcgactggctttccagaacaacctcaaacttcagtatctgaatctgaaagac
aacaacttgtcatctctgtattggaggatatttcgacatttaaacatatcaaatctgatt
ctttcagggaacccgctgcactgttcctgtgagaacatgtggatgaagctgtggctggga
gaggaggctgatgttcaggagctcaaatgtatagaggagggtggcgggaggaaacctctg
accaggctcaacccccctcactgtgtggttcccatggcgactctgagcccgtccaaggtg
acggtgcaggagggtgctgatgtggtgttgacatgcaacacctccggagcgccctctcct
gagctcatctggaacatgaccccactcgtctcctacaatgagattgaggcctcagggcag
gtgtctgagctccatctctataacctctcctcactggacaacaactgtaagatcacctgc
agcgctgagaacattgtgggcgagaatgagtcctcagtcttcctcgacatcctctttccc
cctaacatcagtaaattgagtgatgcctactcggaccaccactggtgcatcccattcagt
atgtctgggaacccaaaacctgatctccgctggctgttaaacggggagccggtaaatgag
ggaccctacatcatgactatgatccatgacttctctgagagggagtaccacggctgcctg
cagctggacagccccacacacatcaacaacggaccgtacactctgctggccagcaacaag
tacggacaagaccgcaagaccgtcgaggctcacttcatgcttgacccctttgatggagga
acagtgacagaaccactttactatgacccaactacaggtatatgtggtcgtagggattgc
agcagtagccttcatgggttttctattgatgctggtcatcttgaaattcgggggaaactc
aaagtttggaatcaaagagcacacttaggccctgttccattcctgccttcatggacctcc
ctcgctccctgcactacctttttggggatctgtacagaacagggcccatggttccatagg
tctccagaggaccataggcacaacggcgatgagtaa
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