Salvelinus sp. IW2-2015 (Arctic char): 111973906
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Entry
111973906 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111973906
04020 Calcium signaling pathway
111973906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111973906
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111973906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
111973906
NCBI-ProteinID:
XP_023857122
LinkDB
All DBs
Position
LG15:complement(14265127..14405107)
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AA seq
2471 aa
AA seq
DB search
MPNITQYVFLNCLTPFEYLILATIIANCIVLALEQHLPAGDKTPMSERLDDTEPYFIGIF
CFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGMLATVGADFDLRTLRAVRVLRPLK
LVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYMGKFHRTCFRTDTGEQ
AAEFPCGLEAPARTCENGTVCQEYWIGPNYGITNFDNILFAILTVFQCITMEGWVDILYN
ANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIE
RELTGYLEWICKAEEVMLAEEDKHAEEKSPLDGAWYKRKHNNPVLKRAKKSKNDLINAEE
GEDHFTDISSVGKANARDSDLLINVLCAVPATVPPGSPFARASLKSSKNGSASYFRRKEK
RLRFTIRHLVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLTEM
SMKMYGLGPMSYFHSSFNCFDFGVIIGSIFEVIWAVVKPGASFGISVLRALRLLRIFKVT
KYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGLFNFDEETPTTNFDTF
PAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAV
DNLANAQELTKDEEEQEVAITKKMALQKAKEVKEVSPMSAANISITASNLPPSHPFPQIK
PPPSHPSHSPASQTHHTKLHSMLYTGQHGAERAMPASFVKQSQGALSSSSSVCSVNSLKE
QQKSLKMMSVWEQRTTQLRRHNLRASSEALYSELDPEERLRMSSALHIRPDMKTHLDRPL
VVEPHDGPGPMGQHKPRTPEETDTPEDPAGPQPRRHHRHRDRERPIDEANENGDPGKEGR
HHVHHSRSKDPDGTRGKEGKSERSRSREGGRRHHHQTLVDEGGGGGTGEREHRHHHSHRQ
AREGNGTVNSGGKGERRSRHKDGRSGERCSRGENGANGERKRHKTHGSRGQSTLEGEDHS
EREKGRGHRDRYVESEGDSLAISPQQDPGDQRWGTEGPEDSDNQRNVRRTGQTAVNIPPV
TITPPPGETTLIPMNSIDCETMPMNEEKKTLEERTQSGPRPILPYSSMFVFGQANVVRRL
CHYIVSLRYFEMCILVVISMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKM
VDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIKSLRVLRVLRPLKTI
KRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKSLEKDC
RGNFLDYDKDEVAAQPRVWKKYEFHYDNVLWAFLTLFTVSTGEGWPDVLKHSVDATFEDQ
GPSPGYRIEISIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDF
AINAKQMTRYMPENVQSFQYRMWKFVVSPPFEYSIMIMIALNTVVLMMKFHGAPDFYEAM
LKHFNIVFTALFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDIVVTEINGPAVES
EFSELFRAARLIKLLRQGYTIRILLWDLRPVFKVTPLVCLLIAMLFHLCHHCMQVFGNIE
LNEDTAITHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRACDERSGNLGKECGSDF
AYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGR
IRYNDMYNLLRIISPPLGLGKNCPNRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALE
IKLSSGMVAQRLSDAELKKELSTVWPSLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYY
KQNRAKRPKEQQQQQQNAAGSQGKVGALFKPILPLTYKQEKEKEKSINNMEPPCELLPQP
QPQALPRPSSTLLNNIEPPCELLPQPQPQALPRPSSTLLNNIEPPCELLPQPQPQALPRP
SSTLLNNIEPPCELLPQPQPQALPRPSSTLLNNIEPPCELLPQPQPQALPRPSSTLLNNG
GTLPGHDGTMKGSSSWVSEKSREVHRPRNKRPVQRGQSEDVPNTTLPQESVEMRKMDTSD
NTVPGPGSGLESQGRAVSMPRLNAELQRSQSRHSPGTLLAPVPDCSPMKRSASTHAPQRP
QEANLRDYTLETPSIQERPHHHHHHRCHHRRERDKKQRSLDRTPSTAGTPGDPAAEPSSR
DRVQDRGRSHERKHHSTAGEKQRYYSCDRYGSREHCHTTKSATASCATSPSEVQDPSINK
QGSGSVKCSPVMMTSGASTPSRGRRQLPQTPLTPRPGVAYKTANSSPVHFVSAQCGSGLP
TLSPGRLSRGLSEHNALLHSGSSHIPSPVTRISSEPFLGYSHREAQGQGSLYCSLRDELL
SPYAARVRSPRTALPQMGPGPLHLPPPPQQSHAVPNGYHFTFGGIGNASPGSGSGARAPR
YYHEADEDEWC
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacattacacagtatgtttttcttaattgtctcactccatttgaatacctgatc
ctggccaccattatagccaactgcatcgtccttgccttggagcagcacctaccagccggc
gacaagacccccatgtcagagcgcttggacgacacagagccctattttattggaatattt
tgttttgaagctggcattaagatcatcgcccttggctttgcgtttcacaaaggctcctat
ctccggaatggctggaatgtaatggactttgtggtggtgctaacagggatgctggctaca
gtgggagcagactttgacttgagaactctgcgggcggtacgggtcctgaggccactgaaa
ctggtgtctggaatccctagtcttcaggtggttctgaagtccatcatgaaagccatggtg
cctctgctgcagatcggtatgctgctcttcttcgctatcctcatgttcgccatcatcggc
ctggacttttacatgggcaagttccaccggacctgtttcaggactgatacaggtgagcag
gcagcagagttcccctgtggtttggaggctccagcgaggacctgtgagaatggcactgtg
tgtcaggaatactggatcggccccaactatggcatcaccaacttcgacaacatcctcttt
gctattctcaccgtcttccagtgcatcaccatggagggatgggtggacatcctctataac
gccaacgatgcctcaggcaacacctggaactggctctacttcatccccctcatcatcatc
ggatccttcttcatgctcaacctggtgctgggagtcctgtctggggagtttgccaaggag
cgtgagcgtgtggagaagaggcaggagtttctgaagcttcgcaggcagcagcagatcgag
agggagctgactggatacctggagtggatatgcaaggcagaggaagtgatgctggcggag
gaggacaagcacgctgaagagaagtcccctctggatggagcgtggtacaaaaggaaacat
aacaacccagtgttgaaaagagcaaagaagagcaagaatgacctgatcaatgctgaggag
ggcgaggaccacttcactgacatctcatctgttggtaaggccaacgcccgtgactcggac
ctcttgatcaacgttttgtgtgctgttcccgccactgttcctccagggtctccgttcgcc
cgggccagcctgaagagcagcaagaacggcagtgcctcctacttccggaggaaagagaag
cggctccgcttcaccatcagacacctggtcaaggctcagagcttctactggacagtgctg
tgtctggtgggcctcaacacactgtgtgtggccatcgtccattacgaccagcctgagtgg
ctcacatatgcactgtatttggcagagtttgtattcctgggcttgtttctgactgagatg
tccatgaaaatgtatggactaggacccatgagctacttccattcgtctttcaactgtttt
gatttcggagtgattataggcagtatttttgaggtgatctgggcagttgtgaaacctggg
gcctccttcggcatcagcgtcctgagagctctccgtctgctcaggattttcaaagtcact
aagtattggaactctctgaggaacctggtggtctctctactcaactccatgaagtccatc
atcagcctgctgttcctcctcttcctcttcatcgtggtgttcgccctactgggcatgcag
ctctttgggggactgtttaattttgacgaggagacgccaacaacaaactttgacaccttt
ccagcagccattctcacagttttccagattctgacaggagaggactggaatgcggtgatg
tatcatgggatagagtcccaggggggcgtgcgccggggaatgttctcctccatctacttc
atcgttctcaccctgtttggaaactacactctcctcaatgtcttcttggccatcgctgtt
gacaaccttgcaaacgcacaggagctcactaaggatgaggaagagcaggaggtggccatc
accaagaagatggccctccagaaggccaaggaggtcaaggaggtcagccccatgtcagcc
gcaaacatctccatcacagcgtcaaacctccctccctcacaccccttcccacagatcaaa
cctcctccctcacacccctcccacagccctgcctcccagacacaccacaccaagctacac
agtatgctgtacacaggccaacatggagcggagagggcaatgccagcaagttttgtaaag
caaagtcaaggtgcactctctagcagctcgtccgtctgcagcgttaattcacttaaggag
cagcagaagtccctgaagatgatgtcagtttgggagcagcgaaccactcagctgaggaga
cataacctgcgggccagcagtgaggccctgtacagcgagctggaccctgaggagaggctt
cgtatgtcctccgccctgcacatccgccctgacatgaagacccacctggaccggcccctg
gtggtggaaccccatgacggccccggccctatgggccaacacaagccccggacccctgag
gagacggatacccctgaggacccggccggcccccagccacgcaggcaccaccgccaccgg
gacagggagagacccatcgacgaggccaatgagaatggcgatccaggcaaagagggtagg
caccatgtccaccacagtcgtagcaaggacccagacggcacccggggcaaggaggggaag
agtgagcggtcacgcagccgagaggggggcaggaggcaccaccaccagaccttagtggat
gagggaggaggaggggggacgggggagagagagcaccgccaccaccactcccacagacag
gccagagagggcaacggcactgtcaacagcggaggcaagggcgagcgcaggtcacgccac
aaagatggccgctcgggagagaggtgctccaggggagagaacggagccaatggggagagg
aagagacacaagacccacggctcaaggggccagtccacactggagggagaggaccacagt
gagagagagaaggggaggggccacagggacagatatgtggagtctgagggcgactccctg
gccatcagcccccagcaggaccctggagatcagaggtggggcaccgagggacctgaagac
tcagacaaccagaggaacgtcagacggactggacagacggccgtcaacatcccccctgtc
accatcacccccccacccggggagactacccttatacccatgaatagtatagactgtgag
accatgcctatgaacgaggagaagaagaccctggaggagcggactcagagtggacccaga
cccatcctgccttacagctccatgtttgtgtttggccaggccaacgtggtgcggcgtctg
tgtcattatattgtcagcctgcggtactttgagatgtgtatcctggtagtgatatccatg
agtagcattgcattggctgcagaggaccctgtccaggccaacgctccgcgcaacaatgtg
ctcaagtatctggactacgtcttcacgggagttttcacatttgagatggtgattaagatg
gttgacctgggcctcctgctccatcctggttcttacttcagagatctctggaacattctg
gacttcattgtggtcagtggcgcactggtggcatttgcattttcagggtccaaaggaaag
gacatcagcaccatcaagtccctcagagttctgcgagtattacggcccctcaagaccatc
aaacgcctacccaagctgaaggctgtgtttgactgtgtggtcaactccctgaagaacgtg
ttcaacatcctcatagtctacatgctcttcatgttcatcttcgctgtcatcgccgtgcag
ctgttcaagggcaagttcttctactgcaccgatgagtccaagagcctggagaaagactgc
agaggtaatttcctggactatgataaagatgaggtggccgcccagcctcgggtgtggaag
aagtatgagttccactatgacaacgtgctttgggccttcctcactctcttcactgtgtcc
accggagagggctggcctgatgttctgaagcactctgtggatgctacctttgaggaccag
ggtcccagtccaggctaccgtatagagatctccatcttctacgtggtctacttcgtggtc
ttccccttcttcttcgtcaacatctttgtggccttgatcatcattaccttccaggagcag
ggagacaaggccatgtcagagtgcagcctagagaaaaatgagagagcctgcattgacttt
gccatcaacgccaagcaaatgacgcgttacatgccagagaacgtgcagtccttccagtac
cggatgtggaagtttgtggtgtcacctccgtttgagtactccattatgatcatgattgcc
ctgaacaccgttgtgctcatgatgaagttccatggagctccagacttctacgaggccatg
ttgaagcacttcaacatcgtcttcactgccctcttctctctggaatgcattctgaagatc
attgccttcggcccgctgaattacctgaaggatgcctggaacgtgtttgactttgtgaca
gtgctgggaagtataactgacattgtggtcacagaaatcaatggaccggctgttgaatct
gagttttctgagctgttcagagcagctcgtctcatcaagctgctgaggcagggatacacc
atccgtatcctgctgtgggaccttcgtccagtcttcaaggtaacacccctagtttgcctt
ctgatagcgatgctgttccatctatgccatcattgtatgcaggtgttcggaaacattgag
ctcaacgaggacacagccatcactcaccacaacaacttccgcacttttcttcaggccctc
atgctgctgttcaggagtgccacaggggaggcgtggcatgagatcatgctgtcgtgtttg
agtcacagagcctgtgatgagaggtcaggcaacctggggaaggagtgtggcagtgactty
gcctayttctactttgtgtccttcatcttcctctgctctttcctgatgctcaatctgttt
gtggctgtcatcatggataactttgagtacctgactcgagactcatctatactggggcct
catcatctggatgagttcatccgtgtttgggctgagtacgaccctgctgcctgcggacgg
attcgctataacgatatgtacaacttgttacgaattatctcaccccctcttggcttaggg
aagaactgccctaatagggtagcgtacaagcggctagtcaagatgaacatgcccatcgcc
gatgacaacacagtccactttacctccactctcatggccctgatccgcacggccctggag
atcaaactgtcctcagggatggttgcccagcgtctttctgatgctgaactgaagaaagag
ctctctacagtttggccaagcctttcacagaagactatggatctgttggttacaccacac
aaacccaatgagcttactgttggaaaggtgtatgcagccctgatgatctttgactactac
aagcagaaccgagccaagaggcccaaggagcagcaacaacagcaacagaatgctgccggc
tcccagggtaaggtgggggctctgtttaaaccaatactgcccctgacttacaagcaggag
aaagagaaggagaagtccatcaacaacatggagcctccctgtgaactacttcctcagccc
cagcctcaggccctacctagacccagctccaccctgctcaacaacatagagcctccctgt
gaactacttcctcagccccagcctcaggccctacctagacccagctccaccctgctcaac
aacatagagcctccctgtgaactacttcctcagccccagcctcaggccctacctagaccc
agctccaccctgctcaacaacatagagcctccctgtgaactacttcctcagccccagcct
caggccctacctagacccagctccaccctgctcaacaacatagagcctccctgtgaacta
cttcctcagccccagcctcaggccctacctagacccagctccaccctgctcaacaatgga
ggcacactgccaggccatgatggcaccatgaaaggatcgtcctcctgggtgtcagagaag
tctagagaggtccacagacccaggaataagagacctgtccaaaggggccagtctgaagat
gtcccaaacacaacccttccccaggagtcagtggagatgaggaagatggacaccagtgac
aacacagtgcctggtcctgggtctggactggagagccaggggagggctgtgtccatgccc
cgcctcaacgcagagctgcagaggagccagtcacgccactccccggggaccctgctggcc
cctgttcctgactgcagcccgatgaagcgctctgcgtccacccatgccccacagcgcccc
caagaggcgaacctgcgtgactacaccctggagacgcccagcatccaggaaaggcctcac
caccaccaccaccaccgctgccaccaccgcagagagagggacaagaagcagcggtcactc
gacaggacgccaagcaccgctggcacaccaggagacccggctgcagagccctcgtcaaga
gacagggtgcaggaccgcggccgctcccatgagaggaagcaccactcgacggcgggggag
aagcagcggtactactcctgcgatcgctacggcagcagggaacactgccacaccaccaag
tctgccaccgccagctgtgcaacctcccccagcgaggtgcaggaccccagcatcaacaag
cagggtagtggttcggttaaatgcagcccagtgatgatgacctcaggggctagcacaccc
agccgtggacgcaggcagctaccccagacccccctgaccccccgccccggggtggcctac
aagactgccaactcctcccctgtgcactttgtgtctgcccagtgtggcagcggcctgccc
accctgagtcctggccggctgagccgcgggctgtctgagcacaacgccctgctgcacagt
ggctcctcccacatcccctcccctgtcacccgcatcagctccgagcccttcctgggctac
agtcacagggaagcccagggccagggcagtctgtactgcagcctccgggacgagctgctg
agcccctatgctgccagagtacgctcccctcggaccgcactgcctcagatggggccgggg
cccctccacctgcctccgccaccccagcagagccatgcggtgcccaacggataccacttc
acctttggtggtattggcaacgccagcccggggtctggctctggtgccagggcacccagg
tactaccatgaggcagatgaggatgaatggtgctag
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