Salvelinus sp. IW2-2015 (Arctic char): 111973933
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Entry
111973933 CDS
T05762
Name
(RefSeq) nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111973933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111973933
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
111973933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc80_HEC
Cohesin_HEAT
Nipped-B_C
PDS5
HEAT
HEAT_EZ
Cnd3
Bacillus_HBL
Cnd1
ARM_ECM29
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
111973933
NCBI-ProteinID:
XP_023857156
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All DBs
Position
LG15:complement(1629785..1652095)
Genome browser
AA seq
1052 aa
AA seq
DB search
MERSRMNRASSSRLSELPQRVESNRMSMVYATPQSKQSFGKLNIPKPQSVTSERRTSFFG
SRTSGAGMARNSAFGAFGGAEKMKDPRPLHDKAYVQQCIRQLCEFLSEKGFPGSMSVKSL
QSPSTKEFLKIFEFIYCLLDPTFQXPTSKVEEEVPRILKDLGYPFVLSKSSMYSVGAPHT
WPQVLGAVVWLIDTVKIFCSMSDQDLLFADFSDGSTEIEDGVEFNKVQSQLTTKPICFPE
PSVVDQDLLITNNYETAMRTAQNFLSVFLKKCGSKQGSEEDYRPLFENFVQDLLSTVNKP
EWPAAELLLSLLGRLLVHQFSNKQTEMTLRVASLDYLGTVAARLRKDAVTSKMDQRSIDR
ILKETQGDDETQQLQKALLDYMEENTETDPSLLFARKFYIAQWFRDTTIETEKTMKSQKR
DREEDSSDGPGHHAKDIETIGEVMQRAEARKKFLRKIIKTVPSHFITLRMNSDTVDYDDS
CLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVSVDPSILSRLDMQ
RGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISVRKRVIKILR
DICLEQPTFNKITEMCVRMIRRVNDEEGIKKLVNETFQKLWFTPTPAHDKDTMTRKILNI
TDVVTACKDTGYDWFEQLLQNLLKVEEDAAYKPAQKACVQLVDNLVEHILKYEESLTESK
GVNSTRLVSCITTLFLFSKIRAQLIVKHAMTMQPYLTTKCNNASDFMVICNVAKILELVI
PLMEHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTHNYKFVWSCFNRYYG
ALTKLKTQHQEDPNSTALAANKPALLRSLFTVGALCRHFEFDMEEFKGITKVVIKEKVLE
LLLYFTKHEDEEVKTKAIIGLGFLVIMYPSQMFSPEVKTLYNGILADRSTSVNLKIQVLK
NLQTYLQEEDSRMQEADQHWKKLSKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQS
SVRHFALNVIALTLNQGLIHPVQVNNACLEQN
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatccaggatgaaccgagcatccagcagtaggctctctgagctccctcaaaga
gttgaaagcaacagaatgagcatggtttatgcaacaccgcagagcaaacaatccttcgga
aagttgaacattcctaaaccccagtctgtcacatccgagagaagaaccagcttttttggt
agtcggaccagtggggctggcatggctcgcaacagcgcctttggtgcctttggaggtgca
gagaagatgaaggatccccgtcccttacacgataaggcctatgttcagcagtgcatcaga
cagttgtgtgagtttctgtcagagaagggctttccgggttcaatgtcagtcaagtctctc
cagtcgccctccaccaaggagttcctaaagatctttgagttcatctactgcctcctggac
cccaccttccagwtgcccacctccaaagtggaggaagaggtccccaggattctcaaagac
ttggggtatccatttgttctctccaaaagttccatgtactctgtgggggcaccacatacg
tggccccaggtcttgggggctgttgtctggctcatcgatactgtgaagatcttttgcagt
atgagtgatcaggacctgctctttgctgatttctctgacggaagcactgagattgaggat
ggggttgagttcaacaaggtacagagccaacttacaacaaaacccatttgtttccccgaa
ccctctgtggtagatcaggacttgctgatcaccaacaactatgagacggccatgaggaca
gcccagaacttcctctcggtgttcctcaaaaagtgtggcagtaagcaggggagcgaggag
gactacaggcctctgtttgagaactttgtccaggacctgctctccacggtcaacaagcca
gagtggcccgctgcggagctactgttgagcctgttaggcagactgctggtgcaccagttt
agtaacaagcagacggagatgaccctgagggttgcctccctggactatctaggcacggtg
gccgctcgcctgcgcaaagatgccgtcaccagcaagatggaccagcgatccattgaccgc
atcctgaaagagacccaaggtgacgacgagacccagcaactgcagaaagcccttctggac
tacatggaggagaacacagagaccgacccttcrctattgtttgccaggaagttctacata
gcgcagtggttccgcgacaccaccatagagacagagaagaccatgaagagccagaaacgg
gaccgggaagaggactcgtcggacggccctggccaccacgccaaggacatcgagaccatt
ggggaggtcatgcagcgggccgaggcgcgcaagaagttcctccgcaagatcataaagacg
gtcccctcccatttcatcaccctgagaatgaactctgacacggtggactacgacgactcc
tgcctcatcgtccgctacttagcctccatgaggccgttcgcccagagctttgatatytac
ttaacccagatcttgcgagtcctgggggagagtgcaatcgctgtccggacaaaagccatg
aaatgtctgtctgaggtggtttctgtggaccctagcattctttccaggttggacatgcag
cgcggggtgcatggccgtctgatggacaactccaccagcgtgcgcgaggcggccgtggag
cttctgggccgcttcgtgctgagccgaccccagctcaccgagcagtactacgacatgctt
atcgagaggatactggacacgggcatcagcgtgaggaagagggtgattaagatcctgaga
gatatctgtctggagcagcccaccttcaacaagattacagagatgtgtgtgaggatgatc
cgtcgggtcaacgacgaggagggcattaagaaactagtcaacgaaacattccagaagctg
tggttcaccccgacaccggcccacgacaaagacactatgaccaggaagattctcaacatt
actgacgtggtcacggcatgcaaagacacaggctacgattggttcgagcaactccttcaa
aatctgttgaaagtggaggaagacgctgcctacaaaccggcccagaaggcttgtgtgcag
ctcgtggacaatcttgtggagcacatcctcaaatacgaggagtctcttacagaaagtaaa
ggagtgaactctacccgcctggtgtcttgcatcaccactctcttcctgttcagcaagatc
cgggctcagctcatcgtcaaacacgccatgaccatgcaaccctacctgaccaccaagtgc
aataacgccagcgacttcatggtgatctgtaacgtggccaagatcctggagctggtgatc
cctctgatggagcacccttctgagaccttcctcaccaccatcgaggaagacctcatgaaa
ctcatcatcaaatayggcatgacggttgtacaacactgtgtcagctgcctcggcgccgtg
gtcaacaaggtgacccacaactataagtttgtgtggtcttgctttaacagatactacggt
gctctgaccaagctgaagacgcagcaccaggaagatcccaacagtacagctctggctgcc
aacaagccggccctcctgcgctccctcttcaccgtgggagccttgtgtcgacactttgag
ttcgacatggaggagttcaagggcatcaccaaggtggtaatcaaagagaaggtgctggag
ctgctgctctactttaccaaacatgargacgaggaggtgaagaccaaggctatcattggc
ttaggcttcctggtgatcatgtaccctagccagatgttttccccggaggtgaagaccctg
tacaacggcatcctggccgacaggagcacctcggtcaacttgaagatccaggtgttgaag
aacctgcagacctatctgcaggaggaggactcrcgcatgcaggaggctgaccagcattgg
aagaagctgtccaagcaggaggacctgaaggagatgggrgatatctcatcgggcatgagc
agttccatcatgcagctgtacctcaagcaggtgctggaagctttcttccacacccagtcc
agcgtgcgccactttgccctcaacgtcatcgcactcactctcaaccagggcctcatccac
cccgtgcaggtaaacaatgcttgtttggaacaaaattaa
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