Salvelinus sp. IW2-2015 (Arctic char): 111974009
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Entry
111974009 CDS
T05762
Name
(RefSeq) nuclear receptor corepressor 2
KO
K06065
nuclear receptor co-repressor 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111974009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111974009
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
111974009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DUF4820
DnaT
Motif
Other DBs
NCBI-GeneID:
111974009
NCBI-ProteinID:
XP_024003283
LinkDB
All DBs
Position
LG15:complement(18144803..18335077)
Genome browser
AA seq
2505 aa
AA seq
DB search
MSSHPQSVPQGRRAVDIRHLPNPASLPLQLARAHTDVGLVDYHPHSRDYSSHLAQPHRRR
PSLLSEFQPGNERGQEQHIRYEHIYLPEPNNQSEVEYVEIKRPRLDLGAESLMRLSAHRP
QLPLGGAEDMSKDRGSSMGKLEPISPVSPAQMDHDLDLVPARFSKEELIQNMDRVDREIT
MVEQQICKLRKKQQQLEEEAAKPQEPERSMISPPPSEAKHRSLVQIIYDENRKKAEEAHR
ILEGLGPRVELPLYNQPSDTKQYHDNIKINQAMRKKLILYFKRRNHARKQWEQKFCQRYD
HLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGGGLAS
SAARSEHEVSEIVDGISEQENTEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDDPMKVY
KDRQVMNMWSEQEKDTFREKFIQHPKNFGLIASFLERKTVAECVLFYYLTKKNENYKNIV
RRNYRRRGRSQQQQQQQQQVNRSSQEDKEEKEKEKEGEREEEKTEGEEKEDVMKDDTSGE
DGEDKEPTVALKGRRTANSQGRRKGRITRSMTSEVEETATPPLSGELANLEMNESSRWTE
EEMETAKKGLLQYGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQKLDEILQQHKMKSERER
KARRKGKALQSEEASAPSAAEEEEMEGSGASGNEEEAPEDGEGGANNSSDTESLPSPRSS
EDSKAKEEGNGRAKAGSNSGDKEASGSHMGQGGDEKPPGEVGKAIKQEVKTEEEGSKEQP
SESTDRDMKPPTADAEESKSSSKSSKRDHGPKTGSHADSDSSATCSADELEELDSTEKNR
MTSPSRPSLLNYAHDGVISSPLQKPMDLKQLKQRAAAIPPIMPQMPDGGPRGGCSKAELP
PHALALYQQQISMAHGESSQEAKQHAGQPSKQHPYPAQGDPHNISSPRVHPRSPSASDKD
ELEGNERWLQTLLHGLHKSRAFSPHGDPKKQAVGPEDLRATTLGRPVMSPYPMSHRDMAK
LSHDQHLLHYNSSFQQAGHSGPPGLQQDGARLAAVLPLHMPEPPPLISSNKPGGSITQGT
PVQLHSPAHGMDHGKMTPAQMGLSWMDQRKVGPYPVVKQEQLSPRCPSSLAENLSTQGMP
HDANAGRGSLPAVQGGSITKGIPGTRVHQDSPISYRGGSITQGTPADMLYKGTITRLITE
DSPSRAERERDELLSKGHVVYEGISGHILTYDRPPSQNPKDDGRGQPGEILGLKRPYDVR
GFPMRETLSSANCEGLIGRAISHERDNPHPTHHIRGSISQGIPRHLDIQDGYMRREAKQM
KREGSPSRGTGQMAEPMKGREAIVPTVKEGGRSIHLIPREELRLMPEGMMMPKAGKEGII
AQGTPMKQEQGSSRKGHDVRSIIASSPRSHYGMPSHLEMRGPEQRGRYEEGPKGRPSTVV
NTASSMARSSPLAMGGEQGGKAHHSPVGYEEHKGGIRAPYPGPSHRGSPLSGQRQHEGSN
KNQPQERKATPTPREMSSGKSPLPSVAEQQAQQQQASLVSYERLLQGLGADVYRGQIPLS
FDPASLRQGIPIDPAYYLPRHLAPNPGYPHPYPYLIRGFPDTAALENRQTLLNDYITSQQ
MHQWPAAAAMAAQRSDLLRGLSPRDQPLQMPYSAAPRGSSGSPMDRITYIPGGQGGFPSR
PYNTSPISPVGPQHMSKQHGTPSADRERERDRERDRERERDRERERDRERERDRERDREQ
ERERDRERQRDRERERERDRDREKGFSHGNVEHAPIWRPGTEHSSGGSNSVRPSSHSGYS
HQHSPVSPRTQDSVQQRPSVLHNTGGKSLPVSDHNNPSVLRSMPGSNRYPGYSHLQRTGM
PTDGYPPSMDPKEMGRDGGKSRGGLPKHSQDQHGPSISSSKSDPKLASPNQGGYPVPYPQ
GSAASHHSGRPPPHLLPPQSDSHVGRGESGTPSREKTQNKPMSVQEQELRSLGKTTMTAA
NFINAIIMRQISCETGMPETGSLVANSASDGKTLWIPGSPHHPDPPPVRLWHIARCGGWH
YQISPIHFYMFSFFPPTLYYFNIFSIVCVCVCVCVCVCVCALALARSVWLHPCVQSVCVG
LCPGHSAQQKMMPMEQHGPYRSPSEERLSPGQQSPLTKGSQRVVTLAQHISEVITKDYTR
QSQQAQQQSYHSNPVLDLTRPLSAPHALPASQESSQGPRYTPEGTGGERTRDGSPQPKAS
PVSMSADGIEPVSPAGAMSEPETQGASYPNEQGMGSRSPPSTSQPPAFFSKLTESTSAIV
KSKKQEMIKKMTVVGSDADFNAGQPGTEIFNMPASTTAGPASIRSHPAPEASGNTIGLEA
IIRKALMGKYDDQAEERPPSSNAINSMAASVHDANPLADGRTEDSYSQQGGGKPKGSGRS
NGRKAKSPGPGLSGGERPSSVHSEGDTNRRTPLINRVWEDRPSSTGPTPFPCNPLTMRFP
GGMPVSAPSPSSGQLGAQGLGQGRAWEEEPKPLLCSQYETLSDSE
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccacccccagtccgtgcctcagggccggagggctgtggacatccgccacctg
ccaaaccctgccagtctaccgctgcagctggcacgggcacacacggatgtgggactggtg
gactaccaccctcactctcgggactacagctcacacctggctcagccccaccgccgccgg
ccctctctgctgtccgagttccagccagggaatgagagaggtcaggagcaacacatccgc
tatgagcacatctacttacctgagcccaacaaccaatcagaggtggagtatgttgagata
aagcgtccccgcctggaccttggggcggagtctctcatgaggctttcagcccaccgccca
caacttcctctgggaggggctgaggacatgtcaaaggaccggggaagctccatgggcaag
ctggagcccatctcccccgtcagcccggcccagatggaccacgatctggacctggtgcca
gcccgcttctccaaggaggagctcatccagaacatggaccgtgttgaccgggagatcacc
atggtggagcagcagatttgcaagcttcgcaagaaacagcaacagctggaggaggaggca
gcgaagccccaggagccggagcggtctatgatctcccccccgcccagcgaggccaagcac
cgcagcctggtgcagatcatctatgacgagaacaggaaaaaggcagaggaagcgcacagg
attctggaaggactgggaccccgagtagaactgcctctgtacaaccagccatctgacacc
aagcagtaccatgacaacatcaaaataaaccaggcgatgaggaagaaactcattctttac
ttcaagaggagaaatcatgctcgtaagcagtgggaacagaagttctgccagcgctatgac
catctgatggaggcctgggagaagaaggtggagcgcattgaaaacaacccccggcgccgg
gctaaggagagcaaggtgcgagagtactacgagaaacagttccctgagatccgcaagcag
agagagctgcaggagcgcatgcagagccgggtggggcagcgtggaggaggactggcctca
tctgcagcccgcagtgaacacgaggtctctgagatcgttgacggcatatcagagcaagag
aacaccgagaagcaaatgcgccagcttgcggtcatccctcccatgttgtttgacgccgag
cagcagcgcatcaagttcatcaacatgaacggcctgatggacgaccccatgaaggtgtac
aaggaccggcaggtcatgaacatgtggagcgaacaggagaaggacaccttccgcgagaag
ttcatccagcacccaaaaaactttggcctgattgcttctttcctggagagaaagacggtg
gcagaatgtgtcctcttctactacctgaccaaaaagaacgagaactacaagaacattgtg
cgcaggaactaccggcgccgtggcaggagccagcaacaacagcaacaacaacaacaagtg
aaccgcagcagccaggaggacaaggaggagaaggagaaagagaaggagggagagagggag
gaggagaagactgagggggaagaaaaggaggatgtaatgaaggacgacacctctggtgag
gacggggaagacaaagagcccacggtggccttaaagggtcgacgcacggctaacagccag
ggccggcgcaagggccgcatcacccgctccatgaccagcgaggtggaggagaccgccacg
ccgccgctcagcggtgaactcgccaatctggagatgaatgagagctctcgctggactgag
gaggagatggaaaccgccaaaaaaggtcttctccagtatggtaggaattggtcggccatc
gccaagatggtgggctccaaaactgtgtcccagtgcaagaatttctacttcaactataag
aagaggcagaaactcgacgagattctgcaacagcataaaatgaaatcggagagagagcgt
aaggcgcggcgtaaaggcaaagctctacaaagtgaagaggccagcgccccgtctgctgcc
gaggaggaggagatggagggctccggggccagcggcaacgaggaggaggcccccgaggat
ggagaaggtggtgctaacaacagctctgacacagagagcctgccctctccgcgttcctct
gaggacagcaaggccaaagaggagggtaatggcagggccaaagctggctcaaactctggg
gacaaggaggcctcaggttcccacatgggccagggaggagatgagaaacccccaggagaa
gtggggaaggccatcaagcaggaggtgaagacagaggaggagggcagcaaggagcagcca
agcgaatccacagaccgagacatgaagccccccactgcagatgcagaggagagcaagagc
tcatccaagagctccaagagggaccatgggcccaagacgggctcccacgcagacagtgac
tctagtgccacctgcagcgctgacgagttggaggagttggacagtacagagaagaacagg
atgacgtctcccagccgtcccagcctgctgaactatgcccatgatggggtcatctcctcc
cccctgcagaagcccatggacctgaagcagctcaaacagagggctgctgccatcccccct
attatgccccagatgccggatggtggacctcggggcgggtgtagtaaggctgagctgccc
cctcatgccctggctctctaccagcagcagatcagcatggctcatggagagtcctcccag
gaggccaagcagcatgcaggtcagcccagcaaacagcacccctacccagcgcagggagac
ccccataacatcagcagcccccgcgtccacccacgtagcccctccgccagcgacaaagac
gagctggaaggcaacgagaggtggctgcagactctacttcacggattacataagtcccgg
gccttctctcctcatggtgaccctaagaagcaggcggtggggccagaggacctgagggcc
actacactgggccggcccgtcatgtccccctacccaatgtcccatcgagacatggccaag
ctcagccacgaccagcacctactccattacaactcctctttccagcaggctggccactct
gggccccctggtctgcagcaggatggtgccagattggcagcggtgctccccctccatatg
ccagagccaccccctctcatctcctccaacaagccaggggggtctatcacacagggcacc
ccagtgcagctgcatagcccggctcacgggatggaccatgggaagatgacccctgcacag
atgggtttgtcctggatggatcagaggaaagtgggtccatacccggtggtgaagcaggag
cagctgtctccacggtgcccgtcatccctggcagagaacctgtccacgcaggggatgccc
catgacgccaacgctggacgtgggtctttgccagcagtgcaggggggcagcatcacaaag
ggcatcccagggaccagagtgcaccaggactcccccatctcctaccggggaggctccatc
acccagggcaccccggcagacatgctgtacaaggggaccataacccgtctgatcacagag
gacagccccagcagagcagagagggagcgggatgagctcctgtccaaaggacacgtggtc
tacgagggcatcagtggacacatcctcacctatgaccgcccaccctctcagaaccctaaa
gatgacggccggggccagcctggggagatcttggggctgaaacgcccctatgatgtcagg
gggtttcccatgagggagacactgtcttcagctaactgtgagggtctgataggcagagcc
atatctcacgagagagacaacccacacccaacccaccacatccgtggttccatttcacag
ggtatcccccgtcacctggacatccaggatggctacatgaggcgggaggccaagcagatg
aagagagagggctccccgtcccgaggaactggccagatggctgaacccatgaagggtcga
gaggccattgtgcccacagtgaaggaggggggccgatccatccacctcatccccagagag
gagctccgactgatgcccgaaggcatgatgatgcccaaggctggcaaagagggcatcata
gcacagggcactcctatgaagcaggagcagggtagctcaaggaaggggcacgacgttcgt
tccataatcgccagctccccacgctcccactacggcatgccctcccacctggagatgcgg
ggacccgagcagcggggccgctacgaggagggtcctaagggccgtcccagcactgtggtc
aacacggccagctccatggctcgatcctcgcccctggcaatggggggtgagcagggtggc
aaggctcaccacagccctgtgggctacgaggaacacaagggcggcataagggctccctac
cctggaccttctcaccgaggatcccccctgtcaggccagcggcagcatgaaggctccaat
aagaaccagcctcaggagcgcaaggccacacccacccctcgggagatgagctccggcaag
tcacccctgccgagcgttgccgagcagcaggcccaacaacaacaggcgtccctggtgtcg
tacgagcgtctgctgcagggtctgggggccgacgtgtaccgaggacagatccccctatcc
ttcgatcctgcctccctgcgtcagggcatccccatcgacccagcctactacctgcctcgc
cacctggcccctaaccctggctaccctcacccctacccctacctgatccggggcttcccc
gacacggcagccctggagaaccgccagacgctgctcaacgactacatcacctcccagcag
atgcaccagtggcctgcagccgccgctatggctgcccagcgctcagacctgctgaggggg
ctctcgccacgggaccagcctctccaaatgccctactctgctgccccacgcgggtcttcc
ggctcccccatggaccgcatcacttacatccccgggggccagggaggtttccccagccgg
ccttacaacacctcccccatctcaccagttgggccccaacacatgagcaagcagcacggc
acaccatctgctgaccgcgaacgagagagggaccgcgagagggaccgcgagagagagagg
gaccgcgagagagagagggaccgcgagagagagagagaccgcgagagagacagggagcag
gagagagagcgggatcgtgagagacagcgagacagagagcgggagagagagcgggaccgg
gacagagagaaggggttctctcatggcaacgtggaacatgcccccatctggagaccaggc
acagagcacagctccggtggtagcaacagtgtcaggccctcctcccactccggctacagc
caccagcactccccggtgtcccctcgtacccaggacagtgtccagcagaggcccagcgtc
ctgcacaacactgggggcaagagtctgcctgtcagtgaccacaacaacccttctgtgcta
aggtccatgccaggctccaatcgctacccaggctacagccacctccagaggaccgggatg
cctactgatggctacccaccaagcatggaccccaaggaaatgggccgggatggtggcaag
agcaggggaggccttcctaaacactcccaagaccaacatgggccctctatatcctccagc
aaatctgaccccaagctggccagccctaaccaagggggttaccccgtgccttacccccag
ggctctgcagcctctcaccactcaggccggcccccacctcacctgctgcccccccagtcg
gatagccatgttggccgcggagaaagtggcacgcctagtagggaaaagactcaaaacaaa
ccgatgtccgttcaggaacaagagctccgatcactcggtaagaccaccatgactgcggcc
aacttcataaacgcgattatcatgcgtcaaatttcttgtgaaacggggatgccagagacg
ggctcgctcgtggccaacagcgccagtgatggtaagacgctctggatcccagggtcccct
catcacccagaccctccccccgttcgtctgtggcatattgcacgctgtggtggttggcat
tatcaaatcagtccaattcatttttacatgttttcgttttttcccccaacactatactat
tttaacattttttccattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgc
gcactcgctctcgcgcgctctgtatggctccacccctgtgtgcaatctgtgtgtgttggg
ctgtgtcctggacactcagctcaacagaagatgatgcccatggagcagcacggtccgtac
cgttctccctccgaggagaggctgtccccaggccagcaatcccccctgacgaaaggcagc
cagagggtggtcaccctggcgcagcacatcagcgaggtgatcaccaaggactatacccgg
cagagccaacaggcccagcagcagtcctaccacagcaacccagtcctggacctgacccgg
ccccttagcgccccccatgccctgcctgcctcccaggagtctagccagggacctcgctac
actccagaggggacaggaggggaacgtacccgagatgggtctcctcagcccaaggcatca
cctgtcagtatgtctgcagacggcattgagccagtgtcccctgcaggagccatgtctgaa
ccagagacacaaggggcctcctaccccaacgagcagggcatgggctctcgctcccctccc
agcacctcccagcccccagccttcttcagcaagctcactgagagcacctcggccattgtc
aagtccaagaaacaggagatgatcaagaagatgaccgtggtcggcagtgacgctgatttc
aatgctggccagccaggaacagagattttcaacatgcctgcctctaccactgcaggacct
gcaagtatccgcagccacccggctcctgaggcatccggtaacaccataggcctggaagcc
attatcagaaaggccctgatgggcaagtatgatgaccaggccgaggagcgccctccctcc
tccaatgctattaactccatggctgccagtgtgcatgacgctaatcctctcgctgacgga
cggaccgaggactcttactcacaacaaggtggggggaagccaaagggtagcgggcgctct
aacgggcggaaggccaaatcccccgggccgggcctgtcagggggggagagaccctcctct
gtccactctgagggggataccaaccgccgcacgcccctcatcaaccgtgtctgggaggac
cggccctcctccacaggccccactcccttcccatgtaaccccctgaccatgcgtttcccc
ggtggcatgccggtgtcagcgccctccccctcctctggccagctaggggcccagggtctg
gggcaggggcgggcctgggaggaggaacctaagcccctgttgtgttctcagtacgagacc
ctgtctgacagcgagtga
DBGET
integrated database retrieval system