Salvelinus sp. IW2-2015 (Arctic char): 111974011
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Entry
111974011 CDS
T05762
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04136
Autophagy - other
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111974011
04136 Autophagy - other
111974011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111974011
03029 Mitochondrial biogenesis [BR:
salp03029
]
111974011
Membrane trafficking [BR:
salp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111974011
Atg1 complex
111974011
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111974011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
111974011
NCBI-ProteinID:
XP_023857275
LinkDB
All DBs
Position
LG15:51534639..51543605
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AA seq
549 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHEAKKALSGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RLSLLLKSLLAITRVTPAYKLSRMQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNMGHMRPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQCVFTVSKAHLKTPKPAVMDTLKVPMMGLAFSHQLYCS
RLSYQPPVLVGAADFCHPYNLNAANPHQVTTQMGIPGKEGGVPQQVPVQPCHGAQAEHGR
VSSCPPADHVPATPSSSGEDAETSSRSIEVNSVSPCDVLETTFTRKVGAFVNKPGTQVTT
ASLDLPFAAFAPRAYDPEENDPMVQPPESPATSSPLQGSLHSQGSGESGGPAQDDFVMVD
FKPAFSKDDLLPMDLGTFYREFQNPPQLASLTIDVSSQSMAEDLDSLPEKLAVYEKNIDE
FDAFVDTLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgctttgaagacagtgcaggtgatagtccaagcgcgtcttggggaaaaagtatgcaca
cgctccttgtcttcacccactggctctgattggttcaatctggcaatcaaagatatccca
gaagttacacatgaggcaaagaaagctctgtccgggcagcttcctggcatcggacgatcc
atgtgtgttgagatctccctcaaaacctcagagggagactcaatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaggtgtcctacactgtctataac
cgcctgtcattactgctcaagtcactgctggccattacaagggtaaccccagcctacaaa
ctctcacgaatgcaaggccatgactatgtcatactgtacaggatatattttggagaggtt
caactcacaggattgggagaagggttccagacagtgcgtgtcggagttgtgggaactccc
attggaaccatcaccttgtcttgtgcttataggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataattattgaccacttcgttgagcgcccc
tttggcaacatgggacacatgcgtccatgtaactacagagcacccggggaagatgaagga
gcgtacaatggggtggaggattctcaagaagtgtgcaccacgtccttctccacttctcca
ccctcacaatgtgtgttcactgtaagtaaggcacatttaaagacccctaaacctgcagtg
atggacactctgaaagtccccatgatgggcctggccttctcacaccaactctactgctct
cgtctctcttatcagcctcctgttcttgttggagctgctgacttctgccacccttacaac
ttaaacgctgccaacccacaccaggtaaccacccagatgggtattccagggaaggagggg
ggcgtaccccagcaggtgcctgtgcagccttgtcatggtgcccaggcagagcatggacga
gtgtcctcatgcccccctgctgatcatgttcccgccacgccctccagcagtggtgaggat
gcagagacctcgtcgaggagcattgaggtgaacagtgtctctccctgtgatgtactggag
accaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacacaggtaaccaca
gcaagcctggacttaccatttgcagcttttgctcccagagcctatgaccccgaggaaaat
gaccctatggttcagccgccggagtccccagccacgtcctctcccctgcagggcagtttg
cactcccagggctctggtgagagtggaggcccggcacaggacgactttgttatggtggac
tttaagcctgcgttctctaaggatgacctccttcccatggaccttggcacattctacaga
gagttccagaaccccccacagctcgccagcctcactattgatgtcagttctcagtccatg
gcagaagacctggactctcttcctgaaaaactggcagtatacgagaagaacattgatgaa
tttgatgcatttgtagacacattgcagtag
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integrated database retrieval system
