Salvelinus sp. IW2-2015 (Arctic char): 111974148
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Entry
111974148 CDS
T05762
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040
Spliceosome
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111974148
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111974148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111974148
Spliceosome [BR:
salp03041
]
Common components
Common spliceosomal components
SR proteins
111974148
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111974148
NCBI-ProteinID:
XP_023857533
LinkDB
All DBs
Position
LG15:25600713..25609515
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AA seq
258 aa
AA seq
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MADGRIYVGNLPADVQERDIEDIFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDCKLRVEHPRSASSKFNGSMGGSGRGSGDGGPGGPKGRFGPPTRRSEFRVIV
TGLPPTGSWQDLKDHMREAGDVCFTDVQRDGEGVVEFLRREDMEYAMRRLDRTEFRSHQG
ETSSIRVHGEMGASRGRSRSRSRSRGRYSPAYQGRGSPPPRYQSPPARRLSRHSPPPRRS
SAAHRSPSSRSPPPRHYR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggcaggatctacgtgggtaaccttccagctgatgtgcaagagagggacatt
gaggatatattcttcaaatatggcaaaatcagagacattgagttgaagaacaacagaggc
actattccctttgcctttgtgcgctttgaagatccacgggatgccgaggatgcagtctat
gggaggaatggttatggatttggagactgcaagcttcgcgttgagcaccctcgctctgcc
tcctctaaattcaacggttctatgggtggtagtggtcgagggagtggggacggaggtccc
ggtggtcctaaagggaggtttgggcctcctactcggagatcagagttcagagttattgtg
actggcctgcctccgactgggagctggcaagacttgaaagatcacatgagggaggctgga
gatgtttgtttcacagatgttcagcgggatggggaaggggtggtggagttcctgcgcaga
gaggacatggagtatgccatgcggcgcctggacaggacagagttcagatcacaccagggg
gagacttcatctatccgagtccatggagagatgggggccagcagaggacgctcgcggtcc
cgttccagatccaggggacggtactcacccgcttatcaaggtcgcggctctccaccccct
cgttatcagtcgccccctgctcgcagattgtctcgccatagcccccctccacgtcgctcc
tctgcagcacaccgtagcccatcaagccgcagcccaccccctcgtcactaccgatag
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