Salvelinus sp. IW2-2015 (Arctic char): 111974228
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Entry
111974228 CDS
T05762
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111974228
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
111974228
NCBI-ProteinID:
XP_023857652
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Position
LG15:complement(60320049..60332774)
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AA seq
814 aa
AA seq
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MKPGHERNQECLPPKKRDLNNSTSSSSAGGGAGSGVGGGGGGGGGEEVASTQSSGVGSDT
QGGGTAEEWLRAQHGLHYGVESAESLQGLPVDQYSMLYRVALPSVSYSQTSLHPVLSHIS
PAYTVPSSLLQHHPGISYPPLGYAQIPHSSFQFVSPYGAVPYAVPPGFVPSSLISPSGTL
SQPHLVPYQSVIQEGVVSPPTQAHVSAHAFAKVGSSGGVPLMLTSEQAAQHQQHLGALPA
AELSPRGVPVFYHSQGTRAAPAPWDPYSGEQETDRDRELNGGGEREQAAREMLQDSVYIA
RNARLLQAASASVALEHAQDRSLKSRRLDERASPGQRSTPDTDLEVQQVVGRLASPVQGV
SGGRKEVSFGPLNLSQGSQRGREAHGEAGESAGRTAYAIHPAVYGDPRMTAHQQQAGQPG
HAVILANGQTVLVPLDYHHLPHQHQQPPQHYPSQTNDDTSAVTMASPTPTPYSKASESPA
RVGLPDRAVVDVAAVEQHPQQPFSVPVTAALTQALVPTPAPSNPSHFMKGAIIQLATGEL
KRVEDLQTQDFVRSAEVSGGLKIDSSMVVDIRTSQQRPGLVALHFTVGEQQSKVTIDVPP
EHPFFVFGQGWSSCSPERTAQLYGLACHHLQVGDVCVSITLQQPPQQQKQPLQQQQQQQQ
QQQTQARTSTKANSTSGAIGQPMGPPAPQQPRPQPHFRMERIHRERERGDKEEPMQLGGV
GQSEMPTRPNRTSAEHTRSQSSYYLHTEGSARPGAGVGVVSTVSSASQRRWSAPGLQRCM
KVEEGAHPQLGSSRPSFIPQEVKLSIEGRSNAGK
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaggtcacgagcgcaatcaggagtgcctgcctcccaagaagagggatctcaac
aacagcaccagtagtagtagtgcgggaggaggggcaggcagtggggtggggggaggaggt
ggtgggggagggggggaggaagtggcctccactcagagctcaggggtcggtagtgacact
cagggaggaggcacagcagaagagtggctgcgtgcacagcatggtctacactatggagta
gaaagtgctgagagcctccaagggctgcccgttgaccagtacagcatgctctatagggtg
gctctcccctctgtctcctactcccagaccagtctacacccagtgttaagccatatctct
ccagcttacactgtcccctcatctctcctacagcatcatccagggatctcctatccccct
ctaggctatgcccagatcccccactcctctttccagtttgtctccccatacggtgcagtc
ccttatgcagtcccccctggctttgtccccagctccctgatctctccctcgggcaccctc
tcccagccccacctggtcccctaccagtcagtcatccaggagggggtggtctcccctcct
acccaggcccatgtatctgcccatgcctttgcaaaagtggggtcgtctggaggtgtcccg
ctgatgctgacctcggagcaggctgcccagcaccagcagcacctgggcgcgctgcccgcc
gcagagctcagtcctcggggagtgccagtcttttaccactctcagggcaccagggctgca
cctgccccctgggacccctacagcggggagcaggagacagacagggatagagagttgaat
ggaggaggggagagggagcaggcagccagggagatgctccaggactcagtctacattgcc
agaaatgcacggctgctgcaggcagcatccgcctctgtagcactggagcacgcacaggac
agaagcctgaagagccgcaggctggacgagagggcttcgcctgggcagcgcagcacccca
gacactgacctggaggttcagcaggtcgttggtcgcctagcctctcctgtccaaggtgtg
agtggaggccgcaaagaggtgtcctttggtcccctgaacctatcccagggctctcagaga
ggcagagaggctcatggggaggcaggtgagagtgctggccggacagcgtacgcgatccac
cctgcggtgtatggagacccccgaatgacggcccatcaacagcaggcagggcagccaggc
cacgcggtcatcttggccaatggacagacagtcctggtccccttagactatcaccacctc
ccccaccaacatcaacagccaccccagcactaccccagccagaccaatgatgacacctct
gctgtcaccatggcctcccccacccccaccccctactctaaagcctctgagtctccagcc
agagtgggcctcccagacagggctgtggtggatgtggccgccgtggagcagcacccccag
cagcctttttctgtcccagtcacggcagccctcacgcaggccctggtgcccacccctgcc
ccctccaatccctcccatttcatgaagggggccatcatccagctagccacgggggagctg
aagcgtgttgaggacctgcagactcaggattttgtgcggagtgctgaggtgagcgggggg
ctgaagatcgactccagcatggtggtggacatcaggaccagccagcagagacccggcctg
gtggcgctgcacttcacagttggcgagcagcagagcaaggtgaccatcgacgtgcccccg
gagcaccccttctttgtgtttggccagggctggtcctcctgcagcccagagcgcacggcc
cagctctatggcctggcctgccaccacctgcaggtaggagacgtgtgtgtgtccatcact
ctgcagcagccgccccagcaacagaaacagcccctgcagcagcagcaacaacagcagcag
cagcagcagacccaagccaggacttccaccaaagccaactccacatcaggggccatcggc
cagcccatggggccccctgccccccagcagcccaggccacagcctcacttcaggatggaa
cgcatccacagagagagggagaggggggataaagaggagcccatgcaactagggggtgtt
gggcagagtgagatgcctaccagaccaaataggacttcagcagagcacactaggagccag
agcagttactatttgcacacggagggttctgctcgtccaggggcgggggtgggagtggtg
tcgacagtgtcgagcgcgtctcagaggcgctggtccgcccccggccttcagagatgcatg
aaggtggaggaaggagcgcaccctcagctgggctcctctcgaccctccttcatcccacag
gaggtcaaactgtccattgaggggcgctctaacgctgggaagtag
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