Salvelinus sp. IW2-2015 (Arctic char): 111974322
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Entry
111974322 CDS
T05762
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111974322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salp03009
]
111974322
Ribosome biogenesis [BR:
salp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111974322
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
111974322
NCBI-ProteinID:
XP_023857812
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All DBs
Position
LG15:27626703..27630537
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AA seq
310 aa
AA seq
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MMFSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRL
NITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMV
ATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKA
VSIIECDMNVDFDAPLGYKEPERRYKAPEEPTEEEGDPSTWTDMDMRFRAFTGSGNRLDG
KKKGIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRPQPRKTTEDEDSEFIAFSGEGQ
SLRKKGGRKP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttccttcaacatgtttgatcacccgatcccacgggctttccaaaaccgtttc
tccactcaataccgctgctactctgtgtccatgctggcgggtcccaacgaccggtcagat
gtggagaaaggaggaaaaattataatgccgccatcagcacttgatcaactaagcagactt
aacattacctaccccatgttgttcaaactgaccaacaagaactcagacagaatgacacac
tgtggtgtcttggagtttgtagcagatgagggtatttgttacctgccacactggatgatg
cagaatctcctgctggaggaagggggcctggtccaggtggagagcgttaacctcatggtg
gcaacatactccaagttccagcctcagagcccagacttcctggatatcactaaccccaaa
gcagtgttggaaaatgccttgagaaactttgcctgcttaaccacaggagatgttattgca
attaactacaatgaaaagatctatgaactgcgagtgatggagactaagccagacaaggca
gtatctatcattgaatgtgatatgaatgtggactttgatgctccgctgggttacaaagaa
ccagagagacgttacaaagcaccagaggagcccacagaagaggaaggagaccccagcact
tggactgacatggacatgagattcagagccttcactggttcaggcaatcgtctggatggc
aaaaagaaaggcattgagcctagccccgtccccatcgatcccagtgacattaaaagaggg
attcctaactacgagtacaaggtcggaaggatcaccttcatcagaaactccaggcctcag
cccaggaaaacaacagaggatgaggattcagaattcatcgccttttctggtgagggacag
tcactacgcaagaaaggtggcagaaagccttga
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