Salvelinus sp. IW2-2015 (Arctic char): 111974460
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Entry
111974460 CDS
T05762
Name
(RefSeq) mucin-5B-like
KO
K22023
mucin-6/19
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111974460
Membrane trafficking [BR:
salp04131
]
Others
Mucins
Secretory mucins
111974460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
Mucin2_WxxW
C8
TIL
VWF
VWC
Pacifastin_I
Motif
Other DBs
NCBI-GeneID:
111974460
NCBI-ProteinID:
XP_024003301
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Position
LG15:complement(63191401..63204382)
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AA seq
1681 aa
AA seq
DB search
MLPFSDTCGVVDQTLNWLSVSSGVSPIHNGQVCSTWGNYHFKTFDGDIFQLPSTCNYVVT
SLCHSSYEDFNIQMRRQVVDHQPTISKITMKLDGAVVELSKGSVVVNGKNAPLPFSQSGI
LIEETPSYIKIKAKLGLVAIWNQDDSFLVEMDIKFRNKTCGLCGDFNGVQQFDEFYSHGM
KLSPVDFGNFWKLDGPTESCTENTLPSNHKCPNLKPICEQLLSGPAFSSCKDLLAIDSFV
EACVSDLCHCDNSTNSFCLCNTISEYSRQCVHAGGKPKQWRTEQFCYKTCPFNMEYQECG
NPCVDTCSNPERGQLCEEHCSDGCFCPPGTVFDDVNKNGCISLSQCSCRHNGKTYAPGES
YSSTCKDCSCGGGQWKCVDKDCPGTCAVEGGSHINTYDGKAYTFHGDCSYVLTKDCDGMQ
FTVLGDLVQCGLSDSETCLKAVTLSLSEGATVINIQPNGKAFVNGIYSQLPFSVAGVTIF
RASSFFIIVQTTFGLQLEIQLSPIMQVYIAASTVWQQRTCGLCGNFNNNQGDDFKVLSGV
TEGTAIGFANTWKTRASCPDIKSSFESPCSLSLDNEKYAQHWCSQLADPEGLFAKCHTAI
SPDMYKDNCMYDSCNCEKSEDCMCAAVSSYVHACAAEGIQLSGWRDTICNKYSTSCPSTM
VYSYSIKSSDRSCRCYSDSDFTCSITFESVDGCVCSEGTYLDDEGKCVAPASCPCYYKGS
VVSPGEVISKDGTMCTCKEGKLHCIGDSPDHPSCVAPMVFVNCSSASPGVRGLECQKSCN
ILDMACISTECISGCMCPSGLVSDGKGGCIMPDLCPCSHNAATYQPGDRIKVDCNTCTCK
DRKWQCTTNLCHGTCAIYGDGHYITFDGKRFTFEGDCEYTLTKDYCGNNNANGSFRVITE
NIPCGTTGTTCSKAIKLFLGNNELILTEGNYQVVERNTGEAVPYQIRTMGIYLVIEANNG
LILMWDRKTSMFIKLNPQFKGHVCGLCGNYDGNANNDFTTRSQAVVVNPLDFGNSWKVSA
SCPDAKSKRSPCTANPYRQSWSQKQCSIIQSKVFADCHSKVDPSSFYDACVTDSCACDSG
GDCECFCTAVAAYAEACNEAGACIAWRSPQICPLFCDYYNTPGECEWHYKACGAQCMKTC
RNPSGSCSTQIPPLEGCYPKCPPAQPFFDEDIMKCVEKEQCGCYGRDGKHYNNGEKVPTT
ENCQTCYCNSVTVDCKYDVQACTCTYNGNKYPYGHIIYDTTDGHSSCMTAVCGKNGTIHR
DMYPCSTTTPTTSIPSHPTPSTNVPTSTSFSTVTTNVFTFSTPTPTEPATSSTETTASPT
TFTTTCGYACVWSQWFDTTFPTLGTPGGDSETYNNIRAEGHDICEKPSKIQCRAEKYPNV
SISQVGQVVQCNVAEGLTCRNEDQSGPFPLCFNYQVRVLCCDENLCTSKPTTISPTTTRP
PVTTTTTTTTATTSTLSTTTLTTETPTCTVCEWSPWYNVDYPQFGPGGGDNESIKKIIES
GKDICEKPVDVICQAVRYPGVPLSELGQKVECNTKVGLICQNKDQGIPPICLDYEIKVKC
CKTVKCHTTTQETTPTVTTTTMSTSTLTTITSKPMTITTPPTSTQPLTTTTTPTTTTTPT
TTMLTSTAPATISTTVPWATTPTPTTTILTSTAPSTTKTTTLPSTTTTPPTSTPTSTSTG
V
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgcttccattcagtgacacttgtggggtcgtagaccaaacgctgaattggttatccgtt
tcctcaggagtgagtcctatacataatggccaggtctgcagcacatggggtaactaccac
ttcaagacctttgacggagacatctttcagctcccctccacctgcaactatgttgtgacc
tcactgtgccatagcagttatgaggatttcaacatccagatgaggcggcaggtggtggac
caccagcccaccattagcaagatcaccatgaagctggatggcgcagtggtggagctatcc
aagggttccgttgttgttaatgggaagaatgcccccttaccattcagccagtctggtatt
ctcattgaagagactccctcctacatcaagatcaaagcaaaactgggattggtagccata
tggaaccaggatgattccttcttggtggagatggacatcaaattcagaaacaagacctgt
ggtctatgtggagattttaatggagttcaacaatttgatgagttctatagccatggtatg
aaattgtcccctgtcgacttcggaaacttctggaaattggatggtccaactgaaagctgt
actgaaaatacactaccttcgaatcataaatgccccaatctgaaaccaatttgtgagcag
ttgctctccggtcctgccttcagcagctgtaaggacttgttggccatcgactcatttgtt
gaggcctgtgtatctgacctgtgccactgtgataacagcaccaactccttctgcctgtgc
aacaccatctcagagtactcccgtcagtgtgttcatgcaggcgggaagccaaaacaatgg
aggactgaacagttctgctataagacctgccccttcaacatggagtaccaggagtgtgga
aacccctgtgttgacacctgctccaaccctgagagaggccagctgtgtgaggaacactgc
tcagatggctgcttttgtcctccaggaaccgtttttgatgacgtcaacaagaatggttgt
atctccttgagtcaatgctcctgccgccacaatggaaaaacctacgcacccggagagtct
tattcaagcacttgtaaagattgctcctgtggtggtggtcagtggaaatgtgtggacaag
gactgtcctggcacatgtgctgtggagggaggatcccacatcaacacctatgatggaaaa
gcctacaccttccatggggactgctcttatgttctgaccaaggactgtgatgggatgcaa
ttcaccgtactgggtgatctggtgcagtgtgggctttctgacagtgagacttgtctaaag
gctgttaccctgtccctctcagaaggagccactgtgatcaacatacaacccaatggaaaa
gcctttgtaaatggaatctattctcagctgcccttttctgttgctggagtaactattttc
agagcctcctcatttttcatcatygtccagaccacctttggcctccagttggaaatccaa
ctctcaccaatcatgcaggtctatattgctgcaagcaccgtttggcagcagagaacttgt
ggtctttgtggaaacttcaacaacaaccaaggagatgatttcaaggtcctgagtggagtg
actgagggcacagccattggttttgcaaacacctggaaaacacgagccagctgcccagac
atcaagagtagctttgaaagcccctgcagcttaagtcttgacaatgagaagtatgcccag
cactggtgctctcagctggctgatcctgaagggttgtttgctaaatgccacacagcgata
agcccagacatgtacaaagacaactgcatgtatgacagctgtaactgtgagaagagtgag
gactgcatgtgtgctgccgtctcctcttatgtccacgcttgtgctgccgagggtatccag
ctcagcggctggagagacactatctgcaacaaatactccacctcgtgccctagcaccatg
gtctacagctacagcataaaaagcagtgatcgctcctgccgctgctacagcgactctgac
tttacctgttcaatcaccttcgagtctgtggatgggtgtgtctgttctgagggaacctac
ctggatgatgagggcaagtgtgttgcaccagccagctgcccttgttattacaagggctca
gtggtgtcccctggagaggtcatcagcaaggatggaaccatgtgcacctgcaaggagggc
aaactccattgtattggagattcacctgatcatccatcatgtgttgcaccaatggttttc
gtcaactgctccagtgcaagcccaggagtgagagggttagagtgtcagaagagctgcaat
attctggatatggcctgtatcagcacagagtgcatttcaggctgtatgtgtccctctgga
ctggtatccgatggaaaaggaggctgcatcatgccagacctttgtccttgttctcacaat
gcagctacttaccaaccaggagacagaatcaaggtcgactgcaatacctgcacttgtaaa
gacagaaaatggcagtgcacaactaacctgtgccatggaacctgtgccatttatggagat
ggacactacattacttttgacgggaaacgattcactttcgaaggagactgtgaatacact
cttacaaaggactactgtggaaacaacaatgccaatggcagcttcagagtcatcactgag
aacatcccttgtggaacaacaggcaccacctgctccaaggccatcaagctcttcctgggg
aacaatgaattaatcctgacagaagggaactaccaagtcgttgagagaaatacaggggag
gcggttccttaccagattcgcacaatgggcatctaccttgtgattgaagccaataatggt
ttgattctcatgtgggacaggaaaacaagcatgttcatcaaacttaacccacagttcaag
ggacatgtctgtggtctgtgtggaaactatgatggcaacgcaaacaatgacttcactacc
aggagccaggcagtggttgtcaatcctctagactttggaaacagctggaaagtctctgca
agctgccccgatgcaaagagcaaaaggagcccctgtactgccaacccttacaggcagtct
tggtcacagaagcagtgcagcatcatacagagcaaagttttcgcagactgccattctaaa
gtggacccctcttctttctatgatgcttgtgtgacagactcatgtgcttgcgacagtggt
ggagactgtgagtgtttctgtaccgctgtggcagcttatgcagaggcctgtaatgaggct
ggagcctgcatagcctggagaagcccacaaatctgcccactgttctgtgattactacaac
acccctggagaatgtgagtggcactacaaggcatgtggagctcagtgtatgaagacctgc
aggaatccttccgggagctgctccactcagataccacctcttgaaggttgctatccaaaa
tgtcctcctgctcaacctttctttgatgaagatataatgaagtgtgtggagaaggagcag
tgtggctgctatggcagagatggaaaacactacaataatggagaaaaagtaccgaccaca
gaaaactgccagacatgctattgtaattccgtgacagttgactgcaaatacgatgtacaa
gcttgcacttgcacctacaatgggaacaaatacccctatgggcatatcatatacgataca
acagatggacatagcagctgtatgacagcagtttgtgggaagaatggaaccattcacagg
gacatgtacccatgttcaactacaactccaacaacttctattccatctcatccaactcca
tctacgaatgttcctacctctacatcattctctacagtgacaacaaatgttttcactttc
tcaacaccaacgccaactgagccagccacatcttcaacagagacaacagcgtctcctaca
acctttactactacatgtggatatgcatgtgtgtggtcacaatggtttgataccacattc
cctacacttggaactccaggaggagactctgaaacctacaacaacataagagcagaggga
cacgatatatgtgagaagccaagcaagatccaatgcagagccgagaagtacccaaatgtt
agcataagccaagtaggccaagtggtgcagtgtaatgtagcagaagggttgacttgcaga
aatgaagaccagtcaggcccattcccactgtgctttaactaccaagttcgagtcctctgc
tgtgatgaaaatctttgyacatctaagcctacaaccatttcaccaacaactacaagacca
cctgttacgacgacaacaacaactacaacagcaaccacctccactttatcaacaaccacg
ttgactacagaaacccctacctgcacagtttgtgagtggtcaccttggtataatgtggac
tatcctcaatttggtcctgggggtggcgacaatgaatcaattaaaaagattatagaatct
gggaaagatatttgtgaaaaaccagtagatgtcatatgccaagcagtgcgatatccaggg
gtcccattgtctgaattaggacagaaggtagaatgtaatacgaaggttggattaatatgc
cagaacaaagatcaaggyattcctccaatatgccttgactatgaaattaaggtcaaatgt
tgtaagactgtgaaatgtcacactacaacacaagaaactacacctactgtcacaactaca
acaatgtcaacatccactttaactacaataacaagtaaaccaatgacaatcactactcct
ccaacctcaactcaacctctgaccacaactacaactcctaccaccactacaacacccact
actacaatgttgacatcgactgctccagctaccatatcaacaacagttccttgggccact
actcctacacccactactacaatcctaacttcgacagctccatctacaacaaaaacaaca
actctgccttccaccactactacacctccaacctctactcctacatcaacctcaacagga
gtataa
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