Salvelinus sp. IW2-2015 (Arctic char): 111974661
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Entry
111974661 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, delta-2-like
KO
K05207
glutamate receptor delta-2 subunit
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111974661
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111974661
Ion channels [BR:
salp04040
]
Ligand-gated channels
Glutamate (ionotropic)
111974661
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
111974661
NCBI-ProteinID:
XP_023858333
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All DBs
Position
LG15:complement(3194139..3935722)
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AA seq
1011 aa
AA seq
DB search
MKVVSAVLFLAIFWSQEWEPVLSDSIIHIGAIFDESARKDDEVFRMAVADLNLNNEILET
EKITISVEFVDGNNPFQAVQEACELMNRGILALVSSIGCMSAGSLQSLADAMHIPHLFIQ
RAPAGTPRSSCPLVSRGRQDDYTLFVRPPVYLNDVILQVVSEYSWQKFIIFYDQEYDIQY
RGIQDFLDKTSQQGMDVSLRSVESNINMMITAWFRTMRVEELHRYRTQLRRAVLFMSPVT
AKPFVFQVVETNLMAFDCHWVIINEEISDQDVQELVMKSIGRLTLIRQTFPLPQNTSQRC
VKHNHRINTSLCDPKDPKAQTLEITNRYVYDTVLLLANTFHRKLEDRKWHSMASLTCIRK
NSKPWQGGRPMLDNVKKSGVSGLTGFLEFTDNGTNPNIYFEILGTNYGEDRGRGVRKLSC
WNDVAGLAGSISLLYIENKFDWHVMRVVLVVKEPFVMVSENVLGKPKKYQGYSIDVLDSL
SNYLGFKYEIYVAPDHKYGSQQSDGVWNGLMGELVAKRADVGLSALTITPERESAVDFTT
RYMDYSVGVLLRKAERTVDMFACLAPFDLSLWACIAGTVLLVGILVYLLNWLNPPRLPMG
AVSSTTFYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTI
TRIENSIQSLQDLSKQTELPYGTVLDSAVYEQVRSKAMNPFERDPMYSQMWRMINRTGGA
DNNVDESKEGIRKVKYGRFAFVWDAAVLEYVAINDEDCSFYTVGSNAPDRGYGFAMQHGS
PYRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSAVHTKHRSSALDIHSFAGVFCVL
AAGVVLSCVIAMVETWWTRRKGSRVPSKEDDKEIDLEHLHRRVNSLCTEDDSPHKQFSTS
SIDLTPLDMDSMPAARQALEQISDFRNTHITTTTFIPEQIQTLSRSLSTKAQQGFAFGPV
QDHRTGGTFRQRAPNGGFFRSPIKTMSSIPYQPTPQPNFSYGNDPDRGTSI
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtttcagcagtgttgttccttgccatattttggagtcaggagtgggagccc
gtgctttctgattcaatcatacacatcggggccatctttgatgagtctgccaggaaggat
gacgaggtgttccgcatggccgtggcggacctcaacctcaacaacgagatcctggagacc
gagaagatcaccatctctgtggagtttgtggatgggaacaaccctttccaggcagtccag
gaagcctgtgagttgatgaacagggggatcctggcgctggtcagctctatcggctgtatg
tcagcgggctccctgcagtcgctggcggacgccatgcacatcccgcacctgttcatccag
cgtgcccccgccggcacccctcgctccagctgtccccttgtcagccgtggccgccaggac
gactacaccctcttcgttcgcccgcccgtctacctaaacgacgtcatcctccaagtggtc
agcgagtacagctggcagaagttcatcatcttctacgaccaggaatacgacatacaatac
cgtgggatccaggacttcctggacaagacgtctcagcagggcatggacgtgtcgctgaga
agtgtggagtccaacatcaacatgatgatcacagcatggttcagaaccatgagggtggag
gagctccaccgctaccggacacaactgcgccgggccgtgctcttcatgagtcccgtcacc
gccaagccttttgtttttcaggttgtggagacgaatctcatggcgttcgactgtcactgg
gtcatcatcaatgaggaaatctcagaccaggacgtccaagaactggtgatgaagtcgatc
gggcgtctgaccctgatcaggcagaccttccccctgccccagaacaccagccagcgctgc
gtcaagcacaaccaccgcatcaacacctccctctgcgaccccaaggaccccaaggctcag
acactggagatcaccaaccgctacgtctacgacacagtgctgctattggccaacactttc
cacaggaagctggaggacaggaagtggcacagcatggccagcctcacctgtatccgcaag
aactctaagccctggcaaggaggacggcctatgctggacaacgtcaaaaagtctggagtg
agtggtctgactggcttcctggagtttacagacaacggaaccaaccccaacatctacttt
gagatcctggggaccaattatggcgaggacaggggcaggggtgtcaggaagcttagttgc
tggaacgatgtagcgggcctagcgggatcgatctctttactgtacatagaaaacaaattt
gactggcatgtcatgagagtcgtactagtcgtgaaggagccctttgtgatggtgtcagag
aatgtccttgggaagcctaagaagtaccaaggttactccatcgacgtactggattctctc
tctaactacctgggcttcaagtacgagatctatgtggcccctgaccataagtacgggagc
caacagtccgacggggtctggaacggactgatgggagagctggtcgccaagcgggcagac
gtgggtctctcggctctcaccatcacgccagaacgggagagtgcggtggacttcaccaca
cgctacatggactactcggtgggtgtgctgctcagaaaggccgagcgtacagtggacatg
ttcgcctgcctagcgccctttgacctgtcgctgtgggcgtgcattgcgggcaccgtgctg
ctggtgggcatcctggtctacctactcaactggctgaacccgccgcgactgcccatgggt
gctgtctcctccaccaccttctacaattccatgtggttcgtctatggatccttcgtccag
cagggtggtgaagttccgtataccaccctggccacgaggatgatgatgggggtatggtgg
ctctttgctctaatcgtcatctcctcctacacggccaacctggctgccttcctcaccatc
acccgcatcgagaactctatccagtctctccaagacctgtccaagcagacagagttgccg
tacgggacggtgttggactcggctgtgtacgagcaggtgcgcagtaaggccatgaacccc
tttgagagggaccccatgtactcccagatgtggcgcatgatcaaccgcaccggaggggcc
gacaacaacgtggacgagtccaaggagggcatccgcaaggtgaagtacgggcgttttgcc
tttgtgtgggatgcggcggtgctggagtatgtggccatcaacgatgaggactgctccttc
tacactgtggggagcaatgcaccagaccggggctatggcttcgccatgcagcacggcagt
ccatacagggacatcttctcccagaggatcctggagctgcagcagaacggggacatggac
atcctgaaactgaagtggtggccgcgggacagcccgtgtgacctgtactcagcggtgcac
accaaacaccgcagcagcgccctggacatccacagcttcgccggcgtgttctgcgtgcta
gcggccggagtggtgctctcctgtgtcatcgccatggtggagacctggtggactaggagg
aagggctcacgagtcccctccaaggaggatgataaggagatcgacctggagcaccttcac
cgccgggttaacagcctgtgcacagaggacgacagcccccacaagcagttctccacctcc
tctattgacctgacgcccctggacatggactctatgccggctgcccggcaggccctggaa
cagatcagtgacttccgcaacacgcacatcaccaccaccaccttcatccccgagcagatc
cagaccctcagccgcagcctgtccaccaaggcccaacagggcttcgccttcggtcccgtg
caggaccaccggactgggggaaccttcaggcagagagcccccaacggtggcttcttccgc
agtcccatcaagacaatgtcctccataccctaccagcccactccccagcccaactttagc
tacggcaacgaccccgatcggggtacgtccatatga
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