Salvelinus sp. IW2-2015 (Arctic char): 111974803
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Entry
111974803 CDS
T05762
Name
(RefSeq) spermatid perinuclear RNA-binding protein-like
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111974803
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111974803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
111974803
NCBI-ProteinID:
XP_023858575
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All DBs
Position
LG15:13814807..13880815
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AA seq
729 aa
AA seq
DB search
MRSIRSFANDDCHVMAKHADIYPSPEELEAVQKLVSTVECALKQVSDWMDNLNTSLSKAP
TTTINIKAAGDSTGTHGSTKTQSVSILCGVMRVGLVAKGLLVKGDMDLELVLMCRDKPTK
LLLYTVSANLPLQLQTLTEDKYEVRSSVSESAIWVVNINDPKFSLKVTLSSLAMRDEHTA
KDQEEDVEVEGLDEVLDGRWCQAALATLRHTKWFQARVTDLKSCVIVMRVFRDMCNRLTV
WEPLKGWPLELICEKAIATCDRPLGPGEALRRVMECIASGILLPDGPGVHDPCEKEPTDT
LSVITDQQAQAITLNAQHALRLLAFGQLYKVLNMNPVTPTKPPHRISGLDKGTCRKRQHE
DRHIDDRQLFKRMKHNPMRVLDNNMMDPNHSMNALIRLNQVHPGLQYKLLSQSGPVHAPV
FTMSVDVHGTVYEASGASKKTAKLRVALKVLQALGYPADFDVDLDSLSADGEGPNHRSDR
NDRMSTSSSRNSVTSSSDAHESRTPGPLLTAGGKNPVMELNEKRRGLKYELLSETGGSYD
KRFIMEASLYTHKHAKRFRKGPMLRTERTRPQRTVGYKSLSFLVFRWEAAVKRAVEVDKQ
KFRGSGPNKKAAKACAALAALKRLFSDSKDPCNKKRRPTTLVKRTVSSTVTIPAHAHSRP
RTRPVMHRAPYISAPPTLGYLPIGYGAPYGYGTAAYLPAYGGLYIDSAFYQPQTIATPII
IHLGPQDLF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccatccgatcgttcgccaacgacgactgccacgtcatggccaagcatgccgac
atctacccttcgccagaggagctggaggctgtccagaagctggtatccaccgtggaatgt
gccctcaaacaggtgtcggactggatggacaacctcaacacctccctaagcaaggcccca
accaccaccatcaacatcaaggctgctggagactctaccggcacccacggcagcacaaag
acccagagtgtgtcgatcctgtgtggggtgatgcgggtgggtcttgtggctaagggcctc
ctggttaaaggagacatggatttggagctggtcctgatgtgcagagacaaacccaccaaa
ttacttctgtacactgttagtgccaacctgcccttgcaactacagacgctgacggaggac
aagtacgaggtgcggtcgagcgtgtcggagtccgccatctgggtggtcaacatcaacgac
cccaaattctccctgaaggtcaccctgtcctcactagccatgagagatgaacacactgct
aaagaccaagaggaagatgtggaggtggaggggcttgatgaggtgctggacgggcggtgg
tgccaggctgctctggcaacgctcagacataccaaatggttccaggccagagtgaccgat
ctgaagtcgtgtgtcatcgtcatgcgtgttttcagagacatgtgcaacagactaactgtg
tgggagcctctcaaaggatggcccctagagctgatctgtgagaaggccatagccacctgt
gaccggcctctggggcccggagaggccctgcgcagggtcatggagtgcatcgcctcaggg
atcctcctcccagatgggccgggagttcacgacccctgtgagaaggagccaacagacacc
ttgtcagtgatcacagaccaacaggctcaggctatcactctcaatgcacagcatgcgcta
cgcctcctagcctttggacagctttataaggtcctgaatatgaatcctgtcactccaacc
aaaccgccacacagaatctccgggttagacaaaggaacctgtcgtaaaaggcagcacgaa
gacagacacattgacgacagacagctcttcaagaggatgaaacacaacccgatgagagtt
ctggacaataacatgatggacccaaaccactccatgaacgccctgataagactgaaccag
gtccacccagggctgcagtacaagctattgtcccagtccggcccggtccacgctccagtc
ttcaccatgtctgtggacgtccacggcactgtctacgaggcttccggcgcctccaagaag
acggccaaactacgagtagcacttaaggtcctacaggcactaggttacccagctgacttc
gatgtggacctggactccctgagtgctgacggcgagggacccaaccatagaagtgataga
aacgacagaatgtccaccagctccagcagaaactctgtcacctcctcctcagacgcacac
gagtcccgcaccccaggccctctccttacggcagggggcaagaacccagtgatggagctg
aatgagaaacgcagaggcctgaagtacgaactcctatcagagaccggcggcagctacgac
aaacgcttcatcatggaggcaagtctttatacacacaaacacgcaaaacgcttcaggaag
ggcccaatgctgcgtacagagcgcactcgccctcagcgcactgtaggctacaaatccttg
agtttccttgtatttcgttgggaagcagctgtgaagcgagctgtggaggttgataaacag
aagttccgaggctcggggcccaataagaaagcggcgaaggcttgcgctgccctggctgct
ctgaagagactcttctctgactccaaagacccctgcaacaagaagaggagacctaccaca
ctggtgaagagaactgtgtcatcaactgtgactatcccagcccatgcccattccaggcct
agaacaaggccagtgatgcatagagcaccctacatcagcgctccccccacccttggctac
ctcccaataggctatggagctccatatggttatggtactgcagcttacctccctgcttat
ggcggcctgtacattgacagtgccttttaccagccacagactattgccactcctattata
attcacctgggtcctcaggatctcttctga
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