Salvelinus sp. IW2-2015 (Arctic char): 111974934
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Entry
111974934 CDS
T05762
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03022
Basal transcription factors
salp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111974934 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
111974934 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111974934 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
salp03400
]
111974934 (gtf2h3)
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111974934 (gtf2h3)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111974934 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
111974934
NCBI-ProteinID:
XP_023858789
LinkDB
All DBs
Position
LG15:23745433..23749643
Genome browser
AA seq
303 aa
AA seq
DB search
MVMASEDEVSLLVIVVDVNPIWWGQQANREPQFTLSKCLDAVMVMGNSHLVMTRTNKLAI
IASHCQESHFLYPCKLWKSGDGHGDDNASTSGDGKYELLSVANDFIAEEIKNLMSRTEVK
GNQTDTLLAGSLAKALCYIHRVAKELEAGQEIKSRILVVKAAEDCALQYMNFMNVIFAAQ
KQSILIDACVLDSDSGLLQQACDITGGLYLKIPQKIALAQYLLWVFLPDSDQRSQLVLPP
PVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIPLPQVVKSKKKKLK
PST
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggcgtcggaggatgaagtcagtcttctggtcattgttgtggatgtcaatccc
atatggtggggtcagcaagctaatcgagaacctcagttcaccctgtccaagtgtctggat
gcagtcatggtgatgggtaactcccacctggtcatgactaggaccaacaagctggccata
attgccagccattgtcaggaaagtcattttctgtatccttgtaagctctggaaatctgga
gatggtcatggggatgacaatgcatcaacaagtggggatggcaagtatgagctattgtca
gttgccaatgacttcattgcagaagagatcaagaatctcatgtcaagaactgaagtgaag
ggaaatcagacagacacactattggcgggatcacttgctaaagctctctgctatatccat
agagtcgcaaaggagctggaagccggacaagaaattaagtcaaggatattggtcgttaaa
gcagcagaagactgtgccttgcaatacatgaacttcatgaatgtgatcttcgctgcccag
aagcagagcatcctaatagacgcctgtgtgttggactcggactcgggtctcctccaacag
gcctgtgacataactggaggattgtacttgaagataccacagaagattgccttggcacaa
tatcttctgtgggtattcctgccagactctgaccaacgctcccaactggtgctgccacct
cctgtacatgtggattacagagcagcatgcttttgccacagaaacctcattgagattggt
tatgtctgctcagtgtgtttgtcaatattctgcaacttcagtcccatctgcacaacgtgc
gagactgccttcaaaattccattgccccaggtggtgaagtcaaagaagaagaaactcaag
ccatcaacgtga
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