Salvelinus sp. IW2-2015 (Arctic char): 111974985
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Entry
111974985 CDS
T05762
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111974985
04020 Calcium signaling pathway
111974985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111974985
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111974985
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
111974985
NCBI-ProteinID:
XP_023858876
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All DBs
Position
LG15:complement(15449063..15618586)
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AA seq
2381 aa
AA seq
DB search
MARFEEELSNRRGGVCQAGPPRVAGRPAGPPSGPRVYKQSMAQRARTMAIYNPIPVKQSC
LTVNRSLFIFSEDCIIRKYAQKITECPFEYLILATIIANCIVLALEQHLPASDKTPMSER
LDDTEPYFIAIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGMLATVGADFDLR
TLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYMGKF
HRTCFRTDTGEQAAEFPCGLEAPARTCENGTVCQEYWIGPNYGITNFDNILFAILTVFQC
ITMEGWVDILYNANDASGNTWNWIYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQ
EFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKHAEEKSPLDGAWYKRKHNNPVLKRA
KKSKHDLINAEEGEDHFTDISSVGSPFTRAAPPGSPFTRASLMSSKNDSAYYFRRKEKRL
RFTIRRLVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLTEMSM
KMYGLGPRNYFHSSFNCFDFGVIIGSIFEVIWAVVKPGASYGISVLRALRLLRIFKVTKY
WNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGMFNFEEETPTTNFDTFPA
AILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDN
LANAQELTKDEEEQEVAITKKMALQKVKEVKEVSPMSAANISITAFVKQSRGALSRSSSV
CSVNSLKEQQKSLKMMSVWEQRTTQLRRHNLRASSEALYSELDPEERLRMSSALHIRPDM
KTHLDRPLVVEPHDGPGPMGHLKHRTPKETDNPGDPAGPQPHRRHRDRERPIDEANENGD
PGKEGRHHVHHSHSKDPNGTRSKEGKSERSHSREGGRRHHHQTSVDEGGGGGTGTGEREH
RHHHSHRQAREGNGTVNSGRKDERRSRHKDGRSGERCSRGENGANGERRRQKTHSYRGQS
TLKGEEHSERERGKSHRDRYVESEGDSMATSTQQDPGDQRWGTEIPEDSDNQRNVRRTGR
TAIHIPPVTITSPPGETPLLPMNSIDCETMPMNEEKKTLEALTRTGPRPILPYSSMFVFG
QTNMVRRLCHYIVSLRYFEMCILVVISMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVF
TFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIKSLRVLR
VLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVIAVQLFKGKFFYCSDE
SKGLEKDCRGNFLDYDKDEVAAQPRVWKKYEFHYDNVLWAFLTLFTVSTGEGWPDVLKHS
VDATLEDQGPSPGYRIEISIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEK
NERACIDFAINAKPLTRYMPENVQSFQYRMWKFVVSPPFEYAIMIMIALNTVVLMMKFHG
APDFYEAMLKHFNIVFTALFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDIVVTE
INTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYA
IIGMQVFGNIELNEDTAITHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRACDERS
GNLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRV
WAEYDPAACGRIKYLDMYQILLHMSPPLGLGKKCPPRVAYKRLVKMNMPIADDNTVHFTS
TLMALIRTALEIKLASGMVAQRLSDAELKKELSQIWPSLSQKTMDLLVTPHKPNELTVGK
VYAALMIFDYYKQNRAKRLKEQQQQQQQQNATGSQGKVRALFKPMLPLTHKQEKVKEKAM
TNVEPPCELLPQPQSQALPTPSSTLLNNGGTLPGHDGTMKGSSSWVSEKSREVHRPRNKT
PVQVGQSEDVPNLTIPQESVEMRKMDTSCSTVPGPGSGLESQGRAVSMPRLNAELQRSKS
RHSPGTLLAPVPDCSPMKRSASTHAPQRPQEVNLHEYTLERPSTQERPHHHHHHHRCHHH
RERDKKQXSLDRTPSTIGAPGDPAAEPSSRDRVQDRGRSHERKNHSTAGEKQRYYSCDRY
SSREHCHTTKSATTSCATSPSEVQEPSINKQGSGSVRGSPVMLTSGAITPSRGRRQLPQT
PLTPRPGVTFKTANSSPVHFLSAQCGSGLPTLSPGRLSRGLSEHNALLHSGTYHIPSPIT
RISSEPFLGYSHNDPQCQGSPYCNLRDELLSPYAARARSPRTPRPQMRPGALHLPPPPQQ
RRAVPNGYHFTFGGNGNASLGSGSGARPPRYYREAEEDEWC
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgaagaggaactatctaaccggcgtggaggggtctgtcaagcgggccca
ccaagagtggcaggtaggccagcaggccccccaagcggccctagggtgtacaaacaatca
atggcccaacgagccaggacaatggccatttacaaccccatccctgtcaagcagagctgt
cttactgtcaaccggtctctattcatctttagtgaggactgtatcatacggaaatatgcc
caaaagattaccgaatgtccatttgaatacctgatcctggccaccattatagccaactgc
atcgtccttgccttggagcagcacctaccagccagcgacaagacccccatgtcagagcgc
ttggatgacacagagccctattttattgcaatattttgttttgaagctggcattaagatc
atcgcccttggttttgcgtttcacaaaggctcctatcttcggaatggctggaatgtaatg
gactttgtggtggtactaacagggatgctggctacagtgggagcagactttgacttgaga
actctgagggcagtacgggtcctgaggccactgaaactggtgtctggaatccctagtctt
caggtagttctaaagtccatcatgaaagccatggtgcctctgctgcagattggcatgctg
ctcttcttcgctatcctcatgttcgccatcatcggcctggacttttacatgggcaagttc
caccggacctgyttcaggactgatacaggtgagcaggcagcagagttcccctgtggtttg
gaggctccagcgaggacctgtgaaaatggaactgtgtgtcaggaatactggatcggcccc
aactacggcattaccaactttgacaacatcctctttgctattctgaccgtcttccagtgc
atcaccatggagggatgggtggacatcctctataacgccaacgatgcctcagggaacacc
tggaactggatctacttcatccccctcatcatcatcggatccttcttcatgctcaacctg
gtcctgggagtcctgtctggggagtttgccaaggagcgtgagcgtgtggagaagaggcag
gagtttctgaagcttcgcaggcagcagcagatcgagagggagctgactggatacctggaa
tggatatgcaaggcagaggaggtgatgctggcagaggaggacaagcatgctgaagagaag
tctcctctggatggagcgtggtacaagaggaaacacaacaacccagtgttaaaaagagcc
aagaagagcaagcatgacctgatcaacgctgaggagggcgaagaccacttcactgacatc
tcatctgttgggtctccgttcacccgggctgctcccccagggtctccgttcacccgggcc
agcctgatgagcagcaagaacgacagtgcttactacttccggaggaaagagaagcggctc
cgcttcaccatcagacgcctggtcaaggcccaaagcttctactggacagtcctgtgtctg
gtgggcctcaacacactgtgtgtggccatcgtccattatgaccagcctgagtggctcacc
tatgcgctgtatttggcagagtttgtattcctgggcttatttctgactgagatgtccatg
aaaatgtatggactaggacctaggaactacttccattcctctttcaattgttttgatttt
ggagtgattataggcagtatttttgaggtgatctgggcagttgtgaaacctggggcctcc
tacggcatcagcgtcctgcgagctctccgtctgctcaggattttcaaagtcactaagtac
tggaactctctgaggaacctggtggtctctttactgaactccatgaagtccattatcagc
ctgctcttcctcctcttcctcttcatcgtggtgttcgccctactgggcatgcagctcttt
gggggaatgtttaattttgaagaggagacaccaacaacaaacttcgacacctttccagca
gccattctcacagttttccagattctgacaggagaggactggaatgcggtgatgtatcat
gggatagagtcccaggggggcgtgcgccggggaatgttctcctccatctacttcatcgtt
ctcaccctgtttggaaactacactctgctcaatgtcttcttggccatcgctgttgacaac
cttgcaaacgcacaggagctcactaaggacgaggaggagcaggaggtggccatcactaag
aaaatggccctccagaaagtcaaggaggtgaaggaggtcagccccatgtcggcagctaac
atctccatcacagcttttgtaaagcaaagtcgaggtgcactctctcgcagctcgtccgtc
tgcagcgttaattcacttaaggagcagcagaagtctctgaagatgatgtcagtgtgggag
cagcgcaccactcagctgaggagacacaacctgcgggccagcagtgaggccctgtacagc
gagctggaccctgaggagaggctacgcatgtcctccgccctgcacatccgccctgacatg
aagacccacctggaccggcccctggttgtggagccccacgacggccccggccccatgggc
cacctcaagcaccggacccctaaggagacagataaccctggggacccggccggcccccag
ccacataggcgccaccgggacagggagagacccatygacgaggccaatgagaatggagat
ccaggcaaagagggtaggcaccatgtccatcacagtcacagcaaggaccccaacgggact
cggagtaaggaggggaagagtgagaggtcgcacagccgagagggtggcaggaggcaccac
caccagacctcagtggacgagggaggtggagggggaactgggacgggagagagagagcac
cgccaccaccactcccacagacaggccagagagggtaacggcactgtcaacagcggacgc
aaggatgagcgcaggtcacgccacaaagatggccgctcaggagagagatgctccagggga
gagaacggggccaatggggagaggaggagacagaagacccacagttacaggggccagtcc
acactgaagggagaggagcacagcgagagggagagggggaagagccacagggacagatat
gtggagtctgagggcgactccatggccactagcacccagcaggaccctggagatcagagg
tggggcacagagatacctgaggactcagacaaccagaggaacgtcagacggacaggacgg
acggccatccacatcccccctgtcaccatcacctccccgcctggggaaaccccccttctc
cccatgaacagtatagactgtgagaccatgcctatgaacgaggagaagaagaccctggag
gcgttgactcggaccggacccagacccatcctcccctacagctccatgtttgtgtttggc
cagaccaacatggtgcggcgtctgtgtcattacattgtgagcctgcggtactttgagatg
tgtatcctggtagtgatatctatgagtagcattgcattggctgctgaggaccctgtccag
gccaacgctccacgcaacaatgtgctcaagtatctggactatgtctttacgggagttttc
acatttgagatggtgattaagatggttgacctgggccttctgctccatcctggttcttac
ttcagagatctctggaacattctggacttcattgtggtcagtggagcactggtggcattt
gcattttcagggtccaaaggaaaggacatcagcaccatcaagtcccttagagttctgcga
gtcttacggcccctcaagaccatcaagcgcctgccaaagctgaaggctgtgtttgactgt
gtggtcaactccctgaagaacgtcttcaacatcctcattgtctacatgctcttcatgttc
atcttcgctgtcatcgctgtgcaactgttcaagggaaagttcttctactgttccgatgag
tccaagggactggagaaggactgcagaggtaatttcctggactacgataaggatgaggtg
gcygcccagcctcgggtgtggaagaagtatgagttccactatgacaacgtgctgtgggcc
ttcctcactctcttcactgtgtccaccggagagggctggcccgatgttctgaagcactct
gtggacgctaccttagaggaccagggtcccagtccaggctaccgtatagagatctccatc
ttctacgtggtctacttcgtggtctttcccttcttcttcgtcaacatctttgtggccttg
atcatcattaccttccaggagcaaggggacaaggccatgtcagagtgcagcctggagaaa
aatgagagggcctgcattgactttgccatcaacgccaagccactgacgcgttacatgcca
gagaacgtgcagtccttccagtatcggatgtggaagtttgtggtgtcacccccgtttgag
tacgccattatgatcatgatcgccctgaacaccgtggtgctcatgatgaagttccatgga
gctccagacttctacgaagccatgttgaagcacttcaacatcgtcttcactgccctcttc
tctctggagtgcattctgaagatcatcgccttcggaccactgaactacctgaaggatgcc
tggaacgtgtttgactttgtgaccgtgctgggaagtataactgacatcgtggtcacagaa
attaatacaacggaccggcttttgaacctgagttttctgaggctgttcagagcagctcgt
ctcatcaaacttctgaggcaaggctacaccatccgtatcctgttgtggaccttcgtccag
tcctttaaggccctgccctatgtttgccttctgatagcaatgctgttcttcatctatgcc
atcatcggtatgcaggtgttcggaaacattgagctcaacgaggacacagccatcactcac
cacaacaacttccgcacttttcttcaggccctcatgctgctgttcaggagtgccacaggg
gaggcgtggcatgagatcatgctgtcgtgtttgagtcacagagcctgtgatgagaggtca
ggcaacctggggaaggagtgtggcagtgactttgcctatttctactttgtgtccttcatc
ttcctctgctctttcctgatgcttaatctgtttgtggctgtgatcatggataactttgaa
tacctgactcgagactcttctatactggggcctcatcatctggatgagttcatccgtgtt
tgggctgagtacgaccctgctgcctgtggccgtatcaagtacctcgatatgtatcagatt
ctcctccacatgtccccacccttaggtttgggaaagaaatgtccgccaagagtcgcctac
aagcggctagtcaagatgaacatgcccatcgccgatgacaacacagtccacttcacctct
acactcatggccctgatccggacggccctggagatcaaactggcctcagggatggttgcc
cagcgtctctctgatgctgaactgaagaaagagctctcacagatttggccaagcctctca
cagaagactatggatctgttggtgacaccacacaaacccaatgagcttactgttgggaag
gtgtatgcagccctgatgatctttgactactacaagcagaaccgagccaagaggctcaag
gaacagcaacagcagcagcagcaacagaatgctactggctcccaggggaaggttagggct
ctgtttaaaccaatgctgcccctgactcacaagcaggaaaaagtgaaggagaaggccatg
accaacgtggagcctccctgtgagctactgcctcagcctcagtctcaggccctacctaca
cccagttccaccctgctcaacaacggaggcacactgccaggccatgatggcaccatgaaa
ggatcatcctcctgggtgtcagagaagtctagagaggtccacagacccaggaataagaca
cctgtccaagtgggccagtctgaggatgtcccaaacctaaccatcccccaggagtcagtg
gagatgaggaagatggacaccagttgcagtacagtgcctggtcctgggtctggactggag
agccagggaagagctgtgtccatgccccgcctcaacgcagagctgcagaggagcaagtcg
cgccactccccggggaccctgttggcaccagttcctgactgcagcccaatgaaacgctct
gcgtccacccacgccccccagcgcccccaggaggtgaacctgcatgaatacaccctggag
aggcccagcacccaagaaaggcctcaccatcaccaccaccaccaccgctgccaccaccac
cgagagagggacaagaagcagcrgtcactggacaggacgccaagcaccattggtgcacca
ggagacccggctgcagagccctcgtctagagacagagtgcaggaccgcggccgctcccat
gagaggaagaaccactcgacggcgggggagaagcagcgctactactcttgcgatcgctac
agcagcagggaacactgccacaccaccaagtctgccaccaccagctgtgccacctccccc
agcgaggtgcaggaacccagcatcaacaagcagggtagtggttcggttagaggcagccca
gtgatgttgacctcaggggctatcacacctagccgtggacgcaggcagctcccacagacc
cccctgaccccccgccccggggtgacgttcaagaccgcaaactcctcccctgtgcacttt
ttgtctgcccagtgtggcagcggcctgcccaccctgagtcctggccggctgagccgtggg
ctgtctgagcacaacgccctgctgcatagtggcacctatcacatcccctcccccatcacc
cgcatcagctctgagcccttcctgggctacagtcacaatgacccccagtgccagggtagc
ccgtactgcaacctccgggatgagctgctgagcccttatgctgccagagcacgctcccct
cggactccacgtcctcaaatgaggccgggggccctccacctgcctccgccaccccagcag
agacgtgcggtgcccaacggataccactttaccttcggtggtaatggcaacgccagcctg
ggctctggctctggtgccaggccacccaggtactatcgcgaggcagaggaggatgaatgg
tgctag
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integrated database retrieval system
