Salvelinus sp. IW2-2015 (Arctic char): 111975015
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Entry
111975015 CDS
T05762
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp02010
ABC transporters
salp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111975015 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111975015 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111975015 (abca2)
Transporters [BR:
salp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111975015 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
Motif
Other DBs
NCBI-GeneID:
111975015
NCBI-ProteinID:
XP_023858916
LinkDB
All DBs
Position
LG15:complement(36818052..36912487)
Genome browser
AA seq
2539 aa
AA seq
DB search
MGFLHQLHLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEANFSSAP
LSLSSTFHHAVSVCPDGQRGRFGFLSKRNQVSQDSPVTQLLERIREVVLQNHLFTADRPG
LGQELESLQQHLESLSTSAGPYPLDNNFNTSQGFTVASVLKNQSVFHQFLVRNLSLPNDT
ASLLLSTPVNLKEVFNLIFGLYPRTGGGSSHSSGREKETTHTPAEKILQLEEKLLGVMQS
LDGGLIHKALRDPTKAAHRQALLKLMSQALGLAGGGAGQRYDPQGLKEVEGVLLTGAMLE
MLTCGEDGPSELSKILLVPEKQQSLLQAYHSAACGGGAGQRTERFGEMSQELREQIDTQS
LIDKLRLEQANSSAPLSQSHLGALLKDLADVERLLRDVDLLSGLARLLPKGACAGHAPPG
APANTTTSWSLNATTWGPNTTENTWEEGGXEGRGREKENVKEENPHSFSTFVQLWAGLQP
ILCGNNRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSQVDKVIQK
ANETFAFVGNVTHYARVWLNISAQLRTYLEEGKLHHHLAWMQQLTSDLRGHPELLNGTDS
DLLRGLLEGNYTLPNTSTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLN
QAYHDNISVFASVIFQTNLDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFY
FLYGFVWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVIS
WVYSVAMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYG
RVLLHSDIFIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIR
EEVAHDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTINQSPVEGDDFNLGL
SMMMLIIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWECPWGGGAR
LSVMEEDQACAMEHRRSEEMRGIEEEPSHLPLVVCIDKLTKVYKMGNKLALNKLSLNLHE
NQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQHNVLF
DKLSVEEHLWFYSKLKGMAEEDIRKEMDKMIDDLELNNKRHSLVQTLSGGMKRKLSVAIA
FVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISH
GKLKCCGSPLFLKSTYGDGYKLTLVKKQSESGDQVTQPPSTLSPSSSSLSPSSSSSLSPC
SEARVTQFIRQFVGSCLLLSDSNTELSYVLPSEAVKKGCFERLFQALEQNLXILALTSFG
VMDTTLEEVFLKVSEEDQSLENSDADMKDSLGGISVGKPAAAVGLGGXGKPQEPGAPAGS
SSSVERPEVELSNLVMSSRLSQSQSSLRSSSSLGSVLGDEEGLYADFYGDYCRLFDNGRD
PHSTSLRADVEEASPEPVVLEGQGSFKLEGWWLKLRQFHGLIVKRFHCAKRNTKGLFSQI
LLPAFFVCVAMTVALSVPSIGDLPPLILSPSQYHNYTQPRGNFIPYANEDRPQYRSKLSP
DASPQXIANTLRLPSGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARYFDSMCLDS
FTQGVPLSNFVPPPPSPAPSDDPDTRFEDGLWNFTATTPTTVRETVTSPPTLSLFIRELV
RCICSMQGTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLRLHRYGGLT
VGNIQKSVPASFGKKTPPMVRKIAVRRSAQVLFNNKGYHSMPTYLNVLNNAILRANLPPG
KGNPAAYGITLTNHPMNRTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKS
TKAKHLQFVSGCDPVIYWLANYIWDMLNYLVPATCCVLILFVFDLPAYTSPTNFPAVLSL
FLLYGWSITPIMYPASFCFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHDKDLKLVN
SYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKIKSPFEWDIVTRGLVAMTIE
GFVGFFITILCQYNFLRKPLRVPVSSQLIEDDDVDVACERRRVLRGDADNDMLKIDNLTK
VYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFIGGNS
ILRELLRVQQSIGYCPQFDALFEDLTAREHLELYTRLRGIPWKDEQRVVSWALEKLELSK
YADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKTGRS
VVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTRTSANVKEVVR
FFNRNFPEAVLKERHHTKVQFQLKSDSISLAQVFSKMEQVVEVLGIEDYSVSQTTLDNVF
VNFAKKQSDNLEQQESSPPGGGQSPLQRLLTLLRPRPANTELSALVSEEPEELESDDDEG
LISFEEERVQLSFNTDTVC
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaccagctacatcttctgttgtggaagaatgtgtctttgaagaggaga
ggaccgtgggtgttggcctttgagatcttcatccctctggtcctcttcttcattctgctg
ggcctgcgccagaagaaacctgccatccccgtcaaggaagctaatttcagcagcgcgccc
ctgtcactcagcagcacattccatcatgcagtctcagtctgtccagacggccagcgagga
cgatttggcttcctaagtaagagaaatcaagtgagtcaagacagtcctgtcacccagttg
ttggagcggatccgtgaggtggtgttacagaaccacctcttcacagcagacaggccagga
ctgggccaggagctggagtccctacagcaacacctggagagcctcagcacatctgcaggg
ccctacccactggacaacaatttcaacaccagccaagggttcacagtagccagtgtgttg
aagaaccagtcagtgttccatcagttcctggtcaggaatctgtcactccccaatgacacc
gccagcctgctgctctccactcctgtcaacctcaaagaggtattcaacctgatctttggc
ctgtaccccagaactggaggggggagtagtcacagttctggaagggaaaaagagaccaca
cacacccctgcagagaagatccttcaactggaggagaagctgctgggagtcatgcaaagt
ctggatggtggactgatccacaaagctttacgagayccaaccaaagcagcccatcgrcag
gccctactcaaactcatgtcccaggctttaggcctagcaggaggaggggcaggccagaga
tacgaccctcagggactgaaggaggtggagggtgttctcctgactggtgccatgttggaa
atgcttacctgtggggaggatgggcctagtgagctgagcaagatcctattggttcccgag
aagcagcagtccctgctccaggcctatcacagcgcagcatgtggtggtggggcgggacaa
aggactgagcgctttggagagatgagccaggagctccgagagcagatagacacacagagc
ctcattgacaagctgcgtctggagcaagccaactcctcggcccctctgtcccagtcccac
ctgggtgctctgctgaaggacttggctgacgtggagaggctcctcagggatgtagacctg
ctgtcaggcctggctcgcctgctccccaagggcgcctgtgccggccacgccccccctggg
gctccagccaacaccaccacktcctggtccctcaacgccaccacctgggggcccaacacc
accgagaacacctgggaggagggcggagasgaggggagaggacgagagaaagagaatgtg
aaagaagagaaccctcactcgttttccacctttgtgcagctgtgggcagggctgcagcct
attctgtgtgggaacaacagaatcattgagccagaggctttaaagcaagggaatatgagc
tctctgggctttaccagtaaagagcagcgcaatctgggcttactagtgcatctgatgact
acaaatcccaagatcctctactctcccatcggctcacaggtggacaaagtcattcagaag
gccaatgagacatttgcgtttgtggggaacgtgactcactacgcccgggtgtggctcaac
atctctgcccagctcaggacttatctggaggagggcaagctgcaccaccacctggcctgg
atgcagcagttgacctctgacctacgtggtcacccggaactgctgaatgggacagacagt
gatctgctgcgtgggttgctggagggcaactacaccctgcccaacacctccaccctgctg
gagcagctggacaccattgacaacgccgcctgtggctggacacacttcatgtccaaggtc
agtgtggatatcttcaagggttttccggatgaggacagcatcgtcaactacacactgaac
caagcttaccatgataacatctcagtgtttgccagtgtgatattccagaccaacctagat
ggctccctgcctcctcatgtcctctataagatcagacagaactccagcttcacagagaaa
accaacgagatacgccgggcctactggcgcccagggcccaacacggggggaaagttctac
ttcctctacggctttgtgtggatccaggatatgatggagagagccatcattaacacgttt
gtgggccatgacgtggtggagcctggcaactatgttcagatgttcccttacccctgctac
acaagagaygacttcctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcc
tgggtctactctgtagccatgatgatccaacacattgtggcggagaaggagcaccggctc
aaagaggtgatgaagatgatgggcctgaacaacgcggtccactgggtggcctggttcatc
actggctttgtccagttgtccatctcagtgacggccctgacggccatcctgaagtacggt
cgggtgctcctccacagcgacatcttcatcatctggctcttcctctccatctacgccatc
gccaccattatgttctgtttcctggtgtcagtgatctactccaaggccaagctggcgtca
gcgtgtggtgggataatctacttcctcagctatgtcccatacatgtacgtggccatcagg
gaggaggtggcccatgacaagatcacggccttcgagaagtgtatcgcttctcttatgtcg
accacagcgttcggactgggctctaagtactttgccctgtacgaggtggctggggttggt
atccagtggcgcaccatcaaccagtcacctgtagagggcgatgacttcaaccttggcctg
tccatgatgatgctcatcatcgatgctagtgtgtatggagtactcacctggtacatagag
gctgtgcacccagggatgtatgggctgcctcggccgtggtacttccccctgcagaagtcc
tactggctgggcagtgggcgtgtggagacatgggagtgtccttgggggggaggggccagg
ctgagtgtcatggaggaggaccaggcgtgtgccatggaacaccggmgatctgaggagatg
cgtggtattgaagaggagcccagccacctgcctctggtggtttgtatagacaagctgacc
aaggtctacaagatgggcaataagctggccctcaacaagctgagcctcaacctccacgag
aaccaggtggtgtccttcctgggacacaacggagccggcaagaccaccaccatgtctatt
cttacaggcctgttcccgcccacctctggctcagccaccatctacggccatgacatccgt
actgacatggagcgtatcaggcagaacctgggcatgtgtccccagcacaatgtgctcttt
gacaagctcagcgtggaggagcacctgtggttctactccaaactcaaaggcatggccgag
gaagacatccgcaaggagatggacaagatgatagacgatctagagttgaataataagcgt
catagcctggtgcagactctgtctgggggaatgaagaggaagctgtccgtggccatagcg
tttgtgggcggctcccgggccgtcatcctggatgagcctacggcgggggtggacccctac
gcacgcagagccatctgggacctcatcctcaagtataaacagggtcgcaccatcctgctg
tccacccaccacatggatgaggctgacctgttaggagaccgcatagccatcatctcccat
gggaaactcaagtgctgcggctctccactctttctcaagagcacctacggagacggctac
aaactcaccctggtcaagaaacagagtgagagcggagaccaggtcacccagcctccctcc
accctgtccccttcctcctcctccctgtcyccctcctcctcctcctccctgtctccctgc
tcggaggcccgggtcacccagttcattcgtcaatttgtggggtcctgtctgctgctgtct
gactccaacactgagctatcctatgtgttgccctctgaggctgtcaagaagggctgcttc
gagaggctatttcaggcattggagcaaaatctgkccatcttggctctgaccagcttcggg
gtgatggacaccactctggaggaggtcttcctcaaggtgtccgaggaggaccagtccctg
gagaacagtgatgccgacatgaaggattccctmggcggtatctcagtggggaaacctgct
gctgcagtgggtctggggggcwctggaaagccacaggagccgggggctccggcggggagc
agcagcagtgtggagaggccagaggtagagctctctaacctggtgatgagctccagactc
agccagagccaatcctccctgcgctcctcctcctccctggggtccgtactgggggatgag
gaagggctctacgcagacttctacggagactactgccgcctcttcgacaatggacgggac
cctcactctaccagcctgagggcggatgtggaggaggcctccccggagcctgtggtcctg
gaggggcagggcagcttyaagctggagggctggtggctgaagctacgccagttccacggc
ctcatcgtcaagaggttccactgcgccaagaggaacaccaagggcctcttctcacagatc
ctgctgcccgcattcttcgtctgcgtggccatgactgtygcgctctcggtgccttccatc
ggagatctgccaccactgatcctgtccccatcccagtaccacaactacacccagccccgt
ggcaacttcatcccctacgccaacgaagaccgcccacagtacaggagtaaactgtccccg
gatgccagccctcagargatcgccaacacgctgcgtctgccatcgggcgtgggcgccacc
tgcgtcctcaaaacgcccttcaacagcaccctggaccagctggcacagacgctcaacccc
agcgccaacaacagcaagaccctggccgcccgctactttgactccatgtgtctggactcc
ttcacccagggagtgccactgtccaactttgtaccccctcccccctcgccagccccctcc
gatgaccccgacactcgctttgaggatgggctgtggaacttyactgccaccactcctacc
actgtcagggaaacggtgacgtctcctcccaccctgtccctgttcatccgggagctggtt
cgttgtatctgctccatgcaggggacgggcttctcctgccccagcggggtgggggggcgg
ccgccccttatgaaggtggtcaccggggacattctggtagacatcactgggcgcaacgtg
tcagagtatctcctctacacctctgacagactgcgcttgcacagatatggaggactcaca
gtaggcaacatacagaaatcagtcccagcatcctttgggaaaaagactccgcccatggtt
cgcaaaatagcagtccgcagatcagctcaggtgctgttcaataataaagggtaccacagc
atgccaacctatctcaacgtcctcaacaatgccatcctgcgtgccaacctgcctccaggc
aagggcaaccctgccgcatacggaatcacactgaccaaccaccccatgaaccgcaccagt
gcaagcctctctctggactacttgctccagggcactgatgtggtgatagcyatcttcatc
atcgtggccatgtcctttgtaccagccagctttgtggtctttctggtggcagagaagtcg
accaaggccaagcacctgcagtttgtgtctggatgtgaccctgtcatctactggctggct
aactatatatgggacatgttgaactatctggtgcctgccacrtgctgtgtccttatcctg
tttgtctttgaccttcctgcgtacacatccccaaccaacttccctgcggtcctgtctctc
ttcctcctctacgggtggtctatcactccaatcatgtacccggcctccttctgtttcgag
gtgcccagcacggcctatgtgttcctcatcgtcatcaaccttttcataggcatcactgcc
acagtggccaccttcctgctgcagctctttgagcatgacaaggatctgaaactggtgaac
agctacctaaagtcctgtttccttatcttcccaaactacaacctgggtcacggcctgatg
gaaatggcctacaacgaatacatcaatgagtactatgctaaaataggtcagtttgacaag
atcaagtctccatttgagtgggacattgtgactcgagggctggtagccatgacaatcgag
ggctttgtaggattcttcatcaccatcctgtgtcagtacaacttcctcaggaaacccttg
agagtaccagtgagcagccagctcatagaggatgatgatgtggatgtggcctgtgagaga
cggagagtactgagaggagatgctgacaacgacatgctgaagattgacaacctcaccaag
gtgtacaagtcgaggaagatgggtcgtattttggctgtggaccggttgtgtttgggtgtg
cgtcctggggagtgttttggcctcctgggtgtgaacggagcagggaagaccaccaccttt
aagatgctgactggtgacgagagcaccacaggaggggaggccttcatagggggaaacagt
atcctgagggagctgttgagagtgcagcagagcattggttactgccctcagtttgatgcc
ttgtttgaagacctgacagccagagagcacctggagctgtacacacgcctccgaggcatc
ccctggaaggacgagcagagggtggtctcatgggccctagagaaactggagctctccaag
tatgcagacaagcccgctggcacctacagtgggggaaacaagcgcaagctgtctactgcc
atcgccctcatcggatacccctctctcatcttcctggaygaacctactacagggatggac
cctaaggcccgcagattcctctggaacctcatccttgatatcatcaagacgggacgctct
gtggtgctgacatcacacagtatggaggaatgtgaggctctgtgcaccagactgggcatc
atggtcaacggcaggttcaaatgcctgggcagcatccagcacctcaagaacaggtttggt
gacggttacatgatcacagtgcggactagaaccagtgccaatgtgaaggaggtggtgaga
ttcttcaacaggaatttcccygaggctgtactaaaggagcgccaccacactaaagtccag
ttccagctgaagtccgacagtatctccctggcccaggtgttcagtaagatggagcaggtg
gtggaggtgctggggatagaggactactctgtcagccagactacactggacaatgtgtty
gtgaactttgccaagaagcaaagtgacaacctggagcagcaggagagttccccccctggt
ggaggccagtcacccctgcagcgcctgctcaccctgctgaggccccggccggccaatacg
gagctcagcgccctggtcagcgaagagccggaggaactggagagtgacgacgatgagggt
ctcatcagctttgaagaggagagggtgcagctctcctttaacacagatactgtctgttga
DBGET
integrated database retrieval system
