Salvelinus sp. IW2-2015 (Arctic char): 111975087
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Entry
111975087 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34-like isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111975087
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111975087
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111975087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111975087
NCBI-ProteinID:
XP_023859024
LinkDB
All DBs
Position
LG15:17800327..17821784
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AA seq
386 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGAVRGQQPGFGASAGPFRFAPSAGYSTYPPTTSGSPSL
VCKACGQAFSVFRRKYTCCDCKKSFCTLCSMLQENLRICATCHLLKGTAFQRPQLMRLRV
RDLRQYLLLRNVPTDTCREKEDLVELVLCHQGTEREGDPDMASFNSRSLYTLPPSATRSA
SELSMLSASQGEALSRSDSSGTTNQDIGDATSLSTLNLEPSEHTPEVIPQMWQRARASLS
DISSLRDIEGLSVRQLKEILARNFVNYSGCCEKWELVERVSRLYRETEENRKSFENVNTA
ITSVVALPLPPICIGGIGGKVSEKDGEKAQLTNLDDSLCRICMDAAIDCVLLECGHMITC
TKCGKRMSECPICRQYVVRAVHVFKS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggggcctcgtccatgtgggcttcatgctgtggtctgctgaatgaagtcatg
ggcacaggggcagtgagaggccagcagcccgggttcggagccagtgctggacccttccgg
tttgcccccagcgcaggatactccacatacccgcccacaacctcagggagccccagcctt
gtatgtaaggcctgtggccaggcattctctgtcttcaggaggaagtatacctgttgcgac
tgtaagaagagcttctgtacgctgtgctccatgcttcaggagaacttgcgtatatgtgcc
acatgtcacctgctgaaggggacagccttccagagaccacagctgatgcggctgagggtc
agagacctgcggcagtacctgctgctacgcaacgtccccacagacacatgcagggagaag
gaggacctggtggaactggtgctgtgtcaccaggggaccgaaagggagggggaccccgac
atggctagcttcaactcccgctccctctacaccctgcccccttccgccacacgctccgcc
tccgagctgtctatgctctccgcctctcagggggaagcgctcagcaggagcgacagctca
gggactaccaaccaggatataggagacgccacgtctctctccaccctgaacctggaaccc
agtgaacacacaccagaggtgatccctcagatgtggcagcgagcacgggcctctctctca
gacatctccagcctgagggacatcgagggcctgtccgtcagacaactgaaggagatcctg
gccaggaattttgtcaactattcaggctgctgtgagaagtgggagctggtagagcgcgtc
agccgcttgtacagagagacagaggagaacaggaagtcatttgaaaacgtgaacacagct
ataacttcagtggtggccttgccccttcctcccatctgcattggagggattggaggtaag
gtatctgaaaaagatggggagaaggcccagctgaccaacctggatgacagcctgtgtagg
atctgcatggacgctgcgattgactgcgtccttctggagtgtggtcacatgatcacctgc
accaagtgtggtaagcggatgagcgagtgtcccatctgcaggcagtacgttgtgagagct
gtgcacgtcttcaagtcctaa
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