Salvelinus sp. IW2-2015 (Arctic char): 111975089
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Entry
111975089 CDS
T05762
Name
(RefSeq) titin isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111975089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111975089
Membrane trafficking [BR:
salp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
111975089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
111975089
NCBI-ProteinID:
XP_023859027
LinkDB
All DBs
Position
LG15:complement(22017895..22035329)
Genome browser
AA seq
1606 aa
AA seq
DB search
MSLADQSQQWYPTSVQVTVFQARNLRIKGKNGTNDAYAIMQVAKDKFSTSVAEKCVAPVW
KEEASFDLSLFHHGNAERCTLYIIVMHRALVGLDKLLGRAVINLLDLHDNSARKKTDWYK
LLDKNGKEDKVRGEVMLDIQFMRNNLTASMFDLSMKDKPRSRIGKLKDKVRGKKKDSFSD
SASAIVPSFSQVVTDSEGEADSHSVCPESPGAKKKSKLKSLFAPKSNLQRNVSQSMSTLG
TLPEKNASLSGSRSSGLNVDSPDVKKKFKFLGHKRTDSNDSKVSTGPFSLLGRSKQKEDP
NSTCINGNHVYAEEVEPMSGSTLSLNSSGQGSVEDVRSHRQPSDAAIDSLKGASVNTYRK
ESADRDRALLEQRRLQEEGEKRQAEEKRHNEEKQKVQLKVLQEEARKQQEEQERRMFQEG
EARKKQQEEGEDRKRLAEERRRLKADELQRLGEEQRQQEEAKKAEEQKQQEEASVTERLS
SLFGMIRKKEEKKEELQQSVANEVRPNPSPSRGTRDLEVPVPAPRHAANTFKDILLSPDP
PIPVEESPVDHQKGVCGTNTPSAAVFNSNRTAKVSAVKPRLESLKQPETPNSDSHRQQSP
SLSCAESPLSSVPSESPDMFSNLHSSLAPPKTRRSTSESPCSSTENLAAIGSSPIGSERK
RPAPLPPSPMELHSHGNPNAGSRSVSAKCGSLVTIKEVEAKRPPLPLPDYDRLFPQKRHG
VQGQTQWDNIIAEVNQRQQEYTSQLIGEEMSVDGPGLDSPAPPHNEKYSYLKERAAERLN
QQQTQVQEVQSSSWRRVGPNSSPALIPPPKPGAAAPPRLVIDSNKKQGQNTAQANPSVER
HNAFVSKVLGSTDPMAQSSNVPSVKPWEDARKVPKTSVALASEGHSVLPIEKPTRLTLRE
VLVSSCTDVPKGLPNTLKEIPATKPRQRLTSKEPVRRVDPEPKAAESTTNVQQENRSEMR
AASTLDFIDMRVSIPVMAKNTEVTANSEKQPSSDSVESDINKKQLERIMKETFSEPDPFP
IAEVLPKYPWAQPEQSHSGDDLFNPPAPPLNDKYSYLQERAAEQLNQQQTQVQEVQSWRR
VGPNSSPELIPPPKPHRLEADSNKKQSQSTAQNNPSVERHSTFVSKVLVSTNPMAQSRDV
PSVKPREDARKVLNTSVSSANDGKSVLPIEKPNRHAPQVLVSSSTDEPKGLPDTPKEIPS
AKLRQSLDSKEQADPELTSAEHTTVQQENRSEMRAVSTPDIMESSPTMAKATDSVEGDIN
KKQLEFIMKETFDDPFPIAEILPKDPWAEPEQSHNGDDLFSGGPQKDDKLEQRLTTDDLV
KLFVPNNPTDLFSSCNDSDSEKHPEEEKPEEPSPAFQMVFSQRKNKRAAPQPPANSSNKG
AMGKGELVKRDPSPRENETTRLATTGSVKLEPQAKNTRQRNLYGKEKVETQARKEKWTAD
PFTFSRMSSDLTSPEPPQSVGEPNPQAGAEGKTLLRAWVSTSEVQPLTVLSSNGDRPALT
PIRPHPVKPMSSMESHALINTPVVREMKTYDSSLGNMKAPCKVESGPYTQLTQEELITLV
VKQQTELSKKDSKIVELEEYIDNLLVRVIEEKPSILQGLTSPKQDL
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggctgaccaaagtcagcagtggtatcccacaagcgtacaggtgaccgtgttc
caagccaggaatttgaggatcaaaggaaagaatggaaccaacgatgcctatgccatcatg
caggtggccaaagacaagttttctacctcggttgccgaaaaatgcgtcgcaccggtatgg
aaggaagaggcatcgtttgacctgtcactgttccaccatggcaacgctgaacgctgcaca
ctgtatatcatagtaatgcacagagctctggtgggactggacaaactcctgggacgagct
gtgatcaacctactggatctacacgataacagcgcccgcaaaaagaccgattggtacaaa
ctgctggataagaatgggaaggaggacaaggtcagaggggaagtgatgttggacatccag
ttcatgagaaacaacttgacagccagcatgtttgacctttccatgaaagacaaaccacgc
tcccgcatcggaaagctcaaggacaaagtgcgtgggaagaaaaaggacagcttctctgac
tcggcctctgcaatagtgccctctttcagccaggtagtcactgacagcgagggagaggct
gactcccactcagtgtgcccagagtctcctggggccaagaagaaatccaagctcaagtcc
ctctttgcccctaaatccaacctgcagcgcaatgtctcccagtccatgtccacactgggc
actcttcctgagaagaacgcatccctcagtggcagtcgctcttctggcctcaatgtggat
tctcctgatgttaaaaagaaattcaagttcctgggccacaagcgcacagacagcaatgac
agcaaagtgtctacaggacctttttctcttctgggcagatccaagcagaaagaagacccg
aacagtacgtgcatcaacggcaatcatgtgtatgcagaggaggtagaacccatgtctggg
tccaccctcagccttaacagctctggtcagggctcagtggaggatgtacgaagccacagg
caaccatctgatgccgccatagactccctcaagggtgcctctgtcaacacctacagaaag
gagtctgcagatagggatagggctctgctggagcaaaggcgccttcaggaagagggagag
aagaggcaggcagaggagaagagacataatgaggagaaacaaaaagtgcagctcaaggta
ttgcaggaggaggcacgcaagcaacaggaggagcaggagaggagaatgttccaggagggt
gaggcaaggaagaagcagcaggaagagggggaggaccggaagcggctagcggaagaaaga
aggcggctgaaggcagatgagcttcagaggctgggggaggagcagaggcagcaggaggag
gccaagaaggcagaggagcagaaacaacaggaggaggcctctgtgactgagaggctgtcc
tctctgtttggtatgatcaggaagaaggaagagaagaaggaagagctgcagcagagtgtc
gccaatgaggtgaggcccaacccatctcccagtcgcggcaccagagatttggaggtccct
gttcctgcccctcgccatgctgccaacacattcaaggatattctcctcagtccagaccct
ccaatcccagttgaggagagcccggtggaccaccagaagggtgtttgcggcaccaacacc
ccgagcgctgcagtcttcaactccaaccgcactgccaaggtgtctgcagtcaagcccaga
ttggagtctctgaagcagcctgaaacccccaactcagactcccataggcaacaatctccc
tccctgtcctgcgccgaatcccctctctctagcgtcccttctgagtctcctgatatgttc
tccaaccttcactcctccctggctccacctaagacacggaggagcacctccgaatccccc
tgcagcagcactgagaacctggctgccataggatcttcccctatcggatctgagaggaag
cggccagctcctctgccccccagcccaatggaactgcatagccatggaaatcccaatgca
ggctccagaagtgtgtctgctaaatgtggctctcttgtgacaattaaggaggttgaggcc
aaaagacctcctctacctcttcctgactatgatcgcctgttcccacagaagaggcatgga
gtacaaggacagactcagtgggacaatatcattgcagaagtgaatcagagacagcaggaa
tacacatctcagctcattggagaagagatgagtgtggatggcccaggcctcgactcccca
gcacctccacacaatgaaaaatattcatacttgaaggagagggcagcagaacgccttaac
cagcaacagacacaagttcaggaagttcaatcttcgtcttggaggagagtggggcccaac
agttcgccagcgctcatcccccctcccaaacctggagctgcagccccccctagactagtg
atagactcaaacaaaaagcaaggccagaacactgcacaggctaatccatctgttgaaaga
cacaacgccttcgtctccaaagtcttgggctctacagatcctatggctcaaagcagcaac
gtaccctcagtgaaaccttgggaggatgcaaggaaggtgcctaaaacatcagttgcttta
gccagcgaaggccattctgttctcccaatagaaaagcctactagacttacattaagagaa
gttttggtgtcaagttgtacagatgtacctaaaggactgccaaacactctcaaagagatc
cccgcaaccaaacccagacaaagattaaccagcaaagagccagtgagacgagtggatcct
gagccaaaagcagcagagtctactaccaatgtacagcaggagaacaggtcagaaatgagg
gcagcctccacactggacttcatagacatgagagtgagtattcctgtcatggcaaagaac
actgaggtaactgctaacagtgaaaagcaaccctcatctgactctgtagaaagcgacatt
aacaaaaaacaactggaacgcattatgaaagagacattttctgagcctgacccttttccc
attgcggaggtcctgcctaaatacccatgggctcaaccagagcagagccacagtggagat
gacctgttcaaccccccagcacctccacttaatgacaaatattcctacttgcaggagagg
gcagcagaacagctaaaccagcaacagacacaagttcaggaagttcaatcttggaggaga
gtggggcccaacagttcaccagagcttatcccccctcccaaaccccatagactagaggca
gactcaaacaaaaagcaaagccagagcactgcacagaataatccatctgttgaaagacac
agcaccttcgtctccaaagtcttagtctctacaaatcctatggctcagagcagagacgta
ccctcagtgaaacctcgggaagatgcaaggaaggtgcttaacacatctgtttcgtcagcc
aatgatggcaaatctgttctcccaatagaaaagcctaatagacatgcaccacaagttttg
gtgtcaagttctacagatgaacctaaaggactgccagacactcccaaagagatcccctca
gccaaactcagacaaagtttagacagcaaagagcaagcagatcctgagctaacatcagca
gagcatacaactgtacagcaggagaacagatccgagatgagggcagtctcaaccccggac
atcatggaaagtagtccaacgatggctaaagctactgactctgtagaaggagacattaac
aaaaaacaactggaattcattatgaaagagacatttgatgaccctttccccattgctgag
atcctgcctaaagacccatgggccgaaccagagcagagccacaatggcgatgacttgttc
tctggaggaccacagaaagacgacaagcttgaacagagactgacaactgatgacttggtt
aagctttttgtgccaaacaatccaaccgatctgttctccagttgtaacgacagtgactca
gaaaaacatccagaggaagaaaaaccagaagagcccagtcctgcttttcaaatggtattt
tctcaaaggaaaaataaacgagcagcacctcagcctccagctaattcgagcaataaagga
gccatgggaaagggtgagctggttaaacgagacccttcacccagagaaaatgagaccacc
aggttagccactacaggatctgtcaaacttgagcctcaagccaaaaatactagacagaga
aatctctatggtaaagaaaaggtagaaacccaagccaggaaagagaagtggacagcagac
ccttttaccttctcccgcatgtcttctgacttgacttctcctgagcctccccagtcagta
ggtgagcccaacccccaggcaggggctgagggtaagaccctgctacgggcctgggtctca
acctctgaggtgcagccactcactgttctgagtagcaatggagatcggccagccttaaca
ccaatcaggcctcacccagtgaagcccatgagctccatggagagccatgctctcatcaac
accccagtggtgagagagatgaagacctatgacagctcactgggaaatatgaaggcacct
tgtaaggtggagagtgggccctacacccagctgacccaggaagagctgattaccctggtg
gtgaagcagcaaacggagctctccaagaaggactccaagatcgttgagttggaggagtac
atagacaacctgctggtgcgcgtcatcgaggagaagcccagcatcctgcaaggcctcacc
tctcccaagcaggacctgtaa
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integrated database retrieval system