Salvelinus sp. IW2-2015 (Arctic char): 111975355
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Entry
111975355 CDS
T05762
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
salp03015
mRNA surveillance pathway
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111975355
09122 Translation
03013 Nucleocytoplasmic transport
111975355
03015 mRNA surveillance pathway
111975355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111975355
03041 Spliceosome [BR:
salp03041
]
111975355
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111975355
Spliceosome [BR:
salp03041
]
Complex C
Other components
EJC/TREX
111975355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
111975355
NCBI-ProteinID:
XP_023859360
LinkDB
All DBs
Position
LG16:complement(33390618..33394704)
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AA seq
147 aa
AA seq
DB search
MSTTDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE
LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL
RVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaactgacttttatttgagatattatgtcgggcacaagggcaagtttggacac
gagttcttggaatttgagtttagaccggacggtaaactgaggtacgcgaacaacagcaac
tacaagaatgacgtcatgatcagaaaagaggcctatgtacacaagagtgtgatggaggaa
ctgaagaggatcatagatgacagtgagatcaccaaggaagatgatgcattgtggccgccc
ccagacagagtgggcagacaggagctggagatcgtcattggcgacgagcacatttccttc
acaacttccaagatcggttccttgattgacgtcaaccagtcaaaggacccagaaggtctc
cgcgtgttctactacctggttcaggatttgaaatgtctcgtcttcagtctcattggacta
cacttcaagatcaagcccatctaa
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