KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111975389
Entry
111975389         CDS       T05762                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111975389
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:salp01009]
    111975389
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salp03021]
    111975389
Protein phosphatases and associated proteins [BR:salp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111975389
Transcription machinery [BR:salp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     111975389
    Little elongation complex (LEC)
     111975389
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing BSP_II Seryl_tRNA_N
Other DBs
NCBI-GeneID: 111975389
NCBI-ProteinID: XP_023859422
LinkDB
Position
LG16:complement(15101486..15150845)
AA seq 652 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALKAFEGYQSSKGLSSQPLIRFTGSQG
KISIPWSENPNELRLFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARQSMAQAEEETRSRGAIVIKPGGRYVGKKVQIRKPAPGLSDIAPSRRTSRP
VIISSSAAKKSTAQQRPLRERLTHLLALKPYRKPELILRLQKDGLLPFDKDSLDSLLQQV
ANLNVRDNTFTLKDSLFKDVQKDWPGYTEGDQQLLKRILVRKMCQAQSQTPSTTTVAPPA
EVQLPVSPPKELASSSPSQKRPAADFIDPLANKKPRISHMANKTAVPINGKPSSSNGKEG
SGAVVAAPAVEGVTSSSQLPLLDIHRPFDPLSDVSNDSSHNGRDCEGQEAAVAERLSQPP
VFSGPAALSVPTLDLSSLGHTGLDGPQGKSTLPSLHGKSKKKSKKHKDKEKSKERERDRV
REKERKGAEERVPEPRKACDITSSPENLKSSSIPHSSTDLNGMCNNTSVPSSSTEMADYL
SEYTVIGSSEQRQTYKNYFNTEYSEYRGLHARIEGITRQFTVLDTELKQLQQGTDKYKTI
HNQILQEYRKIKKTNPNYSQEKNRCEYLHSKLAHIKKLIAKYDQQQLQNWTG
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggcggcgttgaaggaggagcagtgctacggattgtcttgtggacgagtgagcaatggc
agtaatgtctccgtctttcacgtaaaactcactgacagcgccttgaaagcatttgaaggt
tatcagagcagcaagggcctgtcttcacaaccgctgatccgatttactggaagccaaggg
aaaatctcaataccgtggtcggaaaatccgaatgagctgcgactgtttactttctacttg
tccaatgtgggtagggacaacccacaaggcagttttgactgcatccagcagtacatcacc
agtgaggggagcattcagctggactgcctgggtggaatccaggacaagatcacggtgtgt
gccacggacgactcttaccagaaggccaggcaaagcatggctcaggcagaggaggagacc
cgcagcaggggtgcgatcgtcatcaagcctggggggagatacgtgggtaagaaggtgcag
atccggaaaccggcacctgggctgtctgacatcgctccatcgcggcggacgtcgcggcct
gtcatcatctctagcagtgcggcaaagaagagcacggcgcagcagaggcccctgagggag
cgcctcacccacctgctggccctcaagccttacagaaagcctgagctcatcctgcgcctg
cagaaggatggcctcttgcccttcgacaaggactctctggacagcctcctgcaacaggtg
gctaacctaaatgtgagagacaacaccttcacattgaaggactctttgttcaaggacgtt
cagaaggattggccaggctacactgagggagaccagcaacttctgaagaggatccttgtt
cggaaaatgtgtcaggcccagagtcagactccgagcaccaccacagtggctcctccagct
gaggtccaactcccagtgagccctcccaaagagctggctagcagctccccgtcgcagaaa
cgacctgctgcagatttcatcgatcctctggccaacaaaaagcccaggatatcacacatg
gctaacaaaacagcggtgccaataaatggcaagccgagttcctccaatggaaaggagggg
agtggggcagtggttgcggcgccagcggttgaaggcgtgacgtccagctcccagctcccc
ctacttgacatccaccggcccttcgacccactctccgacgttagtaacgactccagccac
aatggccgggactgtgagggccaagaggccgctgtagctgagagactgagccagccacca
gtcttctctgggcctgcagcgctgtccgtaccaaccctggacctctcgtccctcggacac
accggcctcgatgggccccagggcaagagcaccttgccctccctgcacggcaagtccaag
aagaagtccaaaaaacacaaagacaaggaaaagtccaaagagagggaacgggatagagtg
agagagaaggagaggaaaggagcagaggagcgtgttcctgagccaagaaaagcctgtgac
atcacctccagccccgagaacctgaagagcagtagtattccacacagcagcacagatctc
aatggaatgtgcaacaacaccagtgttccttcgtcatcgactgagatggcagactattta
tcggagtatactgtgattggctcttctgagcagcgtcaaacatacaagaattactttaat
actgagtatagtgagtaccggggcctccacgctcggatagagggcatcacccggcagttc
actgtgctcgacactgagcttaagcagctccaacaaggcacagacaagtacaagacaatc
cacaatcagatactccaagagtatcgtaaaataaagaagacgaatccaaactatagccaa
gagaagaaccgctgtgaatatctacacagcaaactggcacatataaagaaacttatagca
aagtatgatcaacagcaacttcaaaactggactggttga

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