Salvelinus sp. IW2-2015 (Arctic char): 111975396
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Entry
111975396 CDS
T05762
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111975396
Membrane trafficking [BR:
salp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
111975396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_LRWD1
Cupin_1
LRR_6
LRRNT
LRR_9
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
111975396
NCBI-ProteinID:
XP_023859434
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Position
LG16:complement(14962344..14996676)
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AA seq
606 aa
AA seq
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MAAGPGMGWPGLLLLLMTTVASTQSQGCPQRCECMAKLKSVACQGKRLSALPDSISSDTR
LLDMSGNMLRWVEHGDLLSYPRLEELDLSENIISVLEPNAFSSLQNLRVLSLRGNQLKLV
PMGAFSHLTNLTTLDLSGNKIVILLDFTFQDLKSLRNLEVGDNDLVYISNKAFLGLVGLR
QLTIERCNLTSISSQSLSYLRSLVTLRLRYLSISSLEDQNFRKLGGLRGLEIDHWPFLEH
ISPHSLQGLNLSWLSITNTNITSVPTAALRSLAHLTSLNLSYNPISVLESWALRDLVRLK
ELHLVNTNLMTVQPYALGGLRQIRLLNLSTNALVTLEEGAFQSVNTLETLRVDGNPLSCD
CRLLWILQRRKTLNFEGKSPVCAGPMEVQGRALSAFSDSALFDHFTCQKPKIRNRKLQPV
TAREGQVVSFVCRAEGEPTPIIFWVSPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGT
YICIASNAGGNATYFATLTVSALPLDAALMANRTYYTGDLNETNLNDTKVFLKFTLDLKT
ILISTAMGCCLFLGVVVFCFLMLFAWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARK
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggtccaggcatggggtggcctggcctgctcctgctgctgatgactactgtg
gcctccactcagagccaaggctgtccccagcgctgtgagtgcatggccaagctcaagtct
gtggcctgccaaggcaagcgcctgtctgccctccccgacagcatctcctcggacacacgc
ctgctggacatgagtgggaacatgcttcgctgggtggagcatggcgacctcctctcctac
cctcggctggaggagctagacctgagtgagaacatcatcagtgtcctggagcccaacgcc
ttctctagcttgcagaacctgagggtgttgtcgctgagggggaaccagctcaaactggtc
cccatgggcgccttctcacacctcacaaaccttaccacactagacctgagtgggaacaag
atcgtcatcctgttggacttcaccttccaggacctaaagagcctgaggaacctggaggtt
ggcgacaacgacctggtctacatctccaacaaggcattcctgggcctggtgggtctgagg
cagctcaccattgagaggtgcaacctgacctccatctccagccagtctctgtcctacctc
cgcagcctggtcactctgcgcctgcgctacctcagcatctcctccctggaggaccagaac
ttccgtaagctgggcgggctgcggggtctggagatcgaccattggcccttcctggaacac
atctccccccatagcctccagggcctcaacctgtcttggctgtccatcaccaacactaac
atcacctctgtgcccacagccgccctacgcagcctggcccacctcaccagcctcaatctc
tcctacaatcccatctcagtgctggagtcctgggcccttagggacctggtccggctgaag
gagctacacctggtcaacaccaacctgatgacggtgcagccgtacgcccttggcggcctt
cggcagatccgcctgcttaacctgtccactaacgccctggtaaccctggaggagggcgcc
ttccagtccgtcaacaccctggagacgctgcgtgtagatgggaaccctctgtcatgtgac
tgccgcctgctttggatcctccagcgcaggaagaccctcaactttgaagggaagtcccca
gtgtgtgcgggacccatggaggtgcagggcagggccctcagcgccttctcagactctgcc
ctctttgaccactttacctgccagaagcccaagatacgcaacaggaagctgcagcctgtg
actgccagggagggccaggtagtgtcctttgtgtgccgggcggagggagagcccacacct
atcatcttctgggtatctccccagcgccgtcggatcactaccaagagcactggacgtgtc
atcgtcctacctgagggaacgctggagatccgctatgcccaggtgaccgacagcggcacc
tacatctgcatcgccagcaatgccgggggtaacgccacctactttgccacgctgaccgtg
agcgcgctgcctctggacgcagcgctcatggccaaccgcacatactacacaggtgacctc
aacgagaccaatctgaacgacaccaaggtcttcctcaagttcaccttggacctcaagaca
atcctgatatccacagccatggggtgttgcttgttccttggggtggtggtcttctgtttc
ctgatgctgttcgcatggagccggggccgggggcagcacaagaataacttctcagtagag
tactccttcagaaaggtagatggccctgctgccagtggcggacagggaggggcccgtaag
ttcaacatgaagatgatttga
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