Salvelinus sp. IW2-2015 (Arctic char): 111975425
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Entry
111975425 CDS
T05762
Name
(RefSeq) ELAV-like protein 1-B isoform X1
KO
K13088
ELAV-like protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111975425
03041 Spliceosome [BR:
salp03041
]
111975425
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111975425
mRNA cycle factors
Stress granule specific factors
111975425
Spliceosome [BR:
salp03041
]
Common components
Common spliceosomal components
General mRNP proteins
111975425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_MUD2_C
RRM_ACIN1
RRM_7
BRAP2
RRM_3
RRM_11
BA_2335-like
WI12
Motif
Other DBs
NCBI-GeneID:
111975425
NCBI-ProteinID:
XP_023859467
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Position
LG16:7845295..7858336
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AA seq
374 aa
AA seq
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MAVRRGHIRYLKVCEVQSCQGDNRESQRHGSKGSINIKQVVYDNDYDEHMADEPKDAKTN
LIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGNPYHKNQSHSLGYGFVNYVNASD
AERAINTLNGLRLQSKTIKVSFARPSSDGIKDANLYISGLPKTMTQKDVEDMFTRYGQII
NSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEPITVKFAANPNQAKNS
QVINQLNHNQGRRFGGPVHHQAQRFRFSPMSVDHMSSMSTVSAEGNSTAGWCIFIYNLGQ
DADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDK
ILQVSFKTSKGGHK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagaaggggacacatcagatacctcaaagtgtgtgaggtacagagttgtcag
ggtgacaacagagagtcacaacggcatggaagtaagggttcaattaacataaagcaagta
gtttatgataacgattacgacgaacacatggcagatgagcctaaagatgccaaaaccaac
cttatcgtcaattacctgccccaaaacatgagccaggacgagttgcggagtctcttcagc
agcatcggcgaggtggagtctgccaaactcatccgcgataaagtggcaggtaatccctat
cacaaaaaccagagccacagtttagggtacggatttgttaactatgttaacgctagtgat
gcagaaagggctatcaataccctcaatgggctgagactacagtctaaaactatcaaggtg
tccttcgccaggccgagctctgacggtattaaggatgccaatctttacattagtgggctg
cccaagaccatgacccagaaagacgtggaggatatgttcacacgctatggccagatcatc
aactcacgtgtcttggtcgatcaggcctcaggcctgtccaggggtgtggcctttatccgc
tttgacaaacgggctgaggcggaggatgccattaaagacctgaatgggcagaaaccccct
ggggcctcagagcccatcacagtgaagtttgctgccaaccccaaccaggccaagaactcc
caggtcatcaaccaactcaaccacaaccagggtcggcgctttgggggcccagtacaccac
caggcccagagattcaggttctctccgatgagtgtagaccacatgagcagcatgtctacg
gtcagcgctgaagggaactccacggccggctggtgtatcttcatttacaacctgggccag
gacgctgacgagggcatcctgtggcagatgttcgggcccttcggagccgtcaccaacgtc
aaggtcatccgcgacttcaacaccaataagtgcaaaggcttcggcttcgtcaccatgacc
aactacgaggaggcggccatggccatcgccagcctcaacggttaccggcttggagacaag
atactgcaggtttccttcaaaaccagcaaggggggtcacaagtaa
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