Salvelinus sp. IW2-2015 (Arctic char): 111975507
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Entry
111975507 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111975507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111975507
Membrane trafficking [BR:
salp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111975507
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
PH_13
SOS1_NGEF_PH
PRKCH_uORF2
Motif
Other DBs
NCBI-GeneID:
111975507
NCBI-ProteinID:
XP_023859582
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Position
LG16:complement(41427449..41527980)
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AA seq
909 aa
AA seq
DB search
MGLVVSPCYNAYYSAFRADLESDAQDLEVESWSLAVDQQYLKKYTKEMVKRQDVIYELMQ
TEMHHVRTLKIMLRVYMRELKEHLQMDELFPRLESLLELHTNFLSRLKERRRDSTQPGSD
RNYNIQRLADILTTQFSGEKGDRLKENYGDFCSHHTEAFNYYKEQLHNNKKFQNLIRKVN
NLSVVRRLGVTECILLVTQRITKYPVLVERXVQNTEVGTEEHEELTRSLGLIKDCIVQVD
ALVNLHEKASRLRDIAHKMEPKSLGKIKDGRVFHREDLAQGRRRLLHEGTANHKAASGRL
KDIVAVLLSDVLLLLQEKDQRYVFSTVDNKPSVISLQKLIVREVAHEERAMFLICASSNE
PEMYEIHTASKEERNSWMTHIRQAVESCPHTEERLFSEQEEARAARFNEFQECLSQKDAQ
IVTFLTEKLQLFSDMCLVSGHEDTTFRSRLMLRGDASDLHQGETLLKGTITDVESLQNLL
LSGVREPASRLEEGSGSGALPRRADTFGGYDSRPIILNKSIVKKKKHSGGGMARDGTQKG
CSDPQLTKIQASQTLEQPQADDDDEEEEASPATWNPIWSNTFPEAEFFDRVLMLSQRLYS
LQAIIAKQDSHIELQRASLTERASFPGRHRGNVLLEQEKQRTLALQREELASFHKLQSQH
RQEQARWERERERHRLQAEAMEGMLRQREEDCRRLEEKLAEEREDLERQRETYQQDLERL
RESTRTVEKEKERLEQQRKIKRKTIEVMPFSGSLNGDLLLGVGSSGSVGSDLSVPQKALV
RSSPSVAAADYLERPEVLARGQSANATALPVKKEVPLHLCSTTNQQHKQVGVQQQIPTKL
AALSSKNSKSAKATHRTDSTDFIDPPDSGARNPARRGHYRKALQPGLPTPWHLSNTSPRL
LTPSTHPEP
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggggttggttgtctcaccctgttataatgcgtactactctgcatttcgagctgatctg
gagtctgatgcccaggacctggaggtggagtcatggagtctggctgtggaccagcagtac
ctgaagaaatacaccaaggagatggtcaagagacaggacgttatctatgagctgatgcag
acagagatgcaccacgtgcggaccctgaagatcatgctgcgtgtgtacatgagggagctg
aaggagcatctccagatggacgagctgttcccgcgcctagagagcctgctggagctgcac
acaaacttcctgtcccgcctaaaagagcggcgccgagactccacgcagcccggcagcgac
aggaactacaacatacagagactcgctgacatcctcaccacacagttttcaggtgagaaa
ggggaccggttgaaggagaactatggtgatttctgcagccaccacaccgaggctttcaac
tactacaaggagcaactacacaacaacaagaagttccagaacctcatacggaaagtcaat
aatttgtccgttgtgagaagattaggggtgacagagtgtattctcctggtgacacaacgc
atcaccaagtaccctgtgctggtggaacgcatrgtgcagaatacagaagtgggtacggag
gaacacgaggagttgaccaggtctctgggtctgattaaagactgcatcgtccaggtggat
gccctggtcaacctgcatgagaaggcctcgcgcctccgagacatcgcccacaagatggag
cccaagtccctcggcaagatcaaagatggccgtgtgttccacagagaggacctggcccag
gggcgacgcaggctgctgcacgaggggacggccaaccacaaggccgcctccggcagactc
aaagatattgtggctgtgctgctgtcagacgtgctgctgttactccaagagaaggaccag
agatatgttttctccacagtggacaacaagccctcagtgatctccctccagaagttgata
gtgagggaggtggcccacgaggagagggccatgttcttgatctgcgcctcctccaatgag
ccggagatgtacgagatacacaccgcctccaaggaggagcgcaactcctggatgacacac
atccggcaggccgtggagagttgtccacacactgaggagagactcttcagtgagcaggag
gaggctcgagccgccagattcaacgagttccaagagtgtctgagccagaaggacgcccag
atcgtgacgtttctgacagagaagctgcagctgttttcagacatgtgtctggtgtctggt
cacgaggatacgacctttcgctcccgcctaatgctgcgaggtgacgcctcagacctccac
cagggggagacactgctcaaggggaccatcactgatgtggagagtcttcagaacctgttg
ctgtctggtgtgagagagccagcttcacgtctagaggagggttcagggtccggggctctg
cccaggagagcagacaccttcgggggctatgacagcaggcccatcatcctcaacaagagc
attgtgaagaagaagaagcacagtggagggggcatggccagagacgggacccagaaaggc
tgctctgacccccagcttacgaagatccaggctagtcagaccctggagcaaccacaggct
gatgatgatgatgaggaggaagaggcctctccagccacctggaaccccatctggtccaac
accttccccgaggctgagttctttgaccgggtgctgatgctgtcccagagactctacagc
ctgcaggccatcatcgccaagcaggacagccacatcgagctgcaacgcgcctccctcact
gagcgggcctccttccctgggcgtcatcgcggcaacgttctcctggagcaggagaaacag
aggacgttggccctgcagagggaggagctggccagcttccacaagctgcagtcacagcac
cgtcaggagcaggctcgctgggagagggagcgmgagcgccaccggctgcaggccgaggcc
atggaggggatgctgaggcagagggaggaggactgcaggaggctggaggagaagctggcg
gaagagagggaggacctggagagacagagagagacgtaccaacaggatctggagagactg
agggagtcgacccgcacagtggagaaggagaaggaacgcctggagcagcagaggaagatc
aagaggaagaccattgaggtgatgcccttctctggcagtctaaatggggatctcctgctg
ggrgtgggcagtagcggcagcgtcggatcagacctctccgtcccccagaaggcccttgtt
cgttccagcccttctgtggcagccgcagactacctggagcgtcctgaggttctggctcgg
ggtcagagcgccaacgccacggcgctgccggtgaagaaggaggtgcctctccacctgtgc
agcaccaccaaccagcagcacaagcaggtgggtgtccagcagcagatccccaccaagctg
gcagccctgagctcaaagaattcgaagagtgccaaggccacccatcgcaccgacagcaca
gatttcattgaccctccagacagcggggccaggaacccagcccgccgcggccattacaga
aaggcccttcagccaggccttccaaccccctggcatctatccaacaccagccccaggctc
ctaaccccctccacacacccagagccctaa
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