Salvelinus sp. IW2-2015 (Arctic char): 111975560
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Entry
111975560 CDS
T05762
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111975560
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111975560
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111975560
NCBI-ProteinID:
XP_023859675
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Position
LG16:18798458..18800508
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AA seq
315 aa
AA seq
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MYNMMETELKPPVPQTNSGGTGNSNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGGGLGGGVNQRMDSYAHMNGWTNGGYGMMQEQLGYGQH
PGLNAHNNAQMQQMHRYDMSALQYNSMTNSQTYMNGSPTYSMAYSQQSTPGMTLGSMGSV
VKSESSSSPPVVTSSSHSRGAPCQTGDLRDMISMYLPGAEVPEQTAQSRLHMSQHYQSAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaactgaactgaaaccccccgtaccccagacaaattctgggggt
actgggaattcaaattcatctggaaacaaccagaaaaacagtccggaccgagtcaagaga
cccatgaatgccttcatggtttggtcgaggggacaacgaagaaagatggcacaggaaaac
cccaaaatgcacaattcggaaataagcaaaagacttggggccgagtggaagcttctatct
gagagcgaaaagcgacctttcattgacgaagcgaagcgtctccgggctctccacatgaag
gaacatccggattacaaataccgaccccggaggaaaaccaagacgctgatgaagaaggac
aagtayactctgccaggtgggctgcttgcrccrggcggcaatggcatgggcgckggagtg
ggtgtmgggggaggcttgggcggtggggttaatcaaaggatggacagttacgcacatatg
aacggctggacaaatggaggttatggcatgatgcaggagcagcttggctacgggcagcac
cctggtttaaacgctcacaacaacgcgcagatgcagcaaatgcaccgctatgacatgagc
gcacttcagtacaactccatgactaactcccagacctacatgaacggatcacccacgtat
agcatggcctactcacagcaaagcactcctggaatgactctgggctccatgggttcggtg
gtcaagtcagagtccagttccagtccccccgtagtcacgtcgtcgtctcactccaggggt
gctccatgtcagacaggagacctacgggacatgatcagtatgtacttaccgggcgctgag
gtgccggagcaaactgctcaaagcagactccacatgtcccaacattaccagagcgcacct
gtacccggcacgacgattaatggcacactcccattatcacatatgtaa
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