Salvelinus sp. IW2-2015 (Arctic char): 111975578
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Entry
111975578 CDS
T05762
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
salp03029
]
111975578 (polrmt)
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111975578 (polrmt)
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
111975578 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Motif
Other DBs
NCBI-GeneID:
111975578
NCBI-ProteinID:
XP_023859727
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All DBs
Position
LG16:complement(13872203..13965515)
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AA seq
1336 aa
AA seq
DB search
MSLLRLCTFPKCLSGRILLEISVRRVPYADHCLTIRNNIERHISEPPWTSQRRHFSALIP
KKEDGKKRVWEQSQLLDVLEARIQQLQSDVIVDVQHEKVQFVKASKSGIRASSGNSPKNV
SGERTEVSKAGQTISKGGGQTGKGEGKDVSASKSRWMEKLSQEKKTKTKKLKQKLGLEDK
PVKTSKGKLMLPGTSHKTISTKAGIQTASTVKKSKTLKNQEHTVAASKHEHTMAAALVAN
PIRKAKGKGKALKEPTPELSEARNRAEELERKAEAKARELAEVEELERKLNQWAVSASPE
LVQDNSEARVYGDIQRSVRCYLEACVFCGDIDRAHRFLLGHHRMLSRRNLLNIGLYNIMM
RVWAKKGTLNQIGRMFILIEEAGLKPNLGSYCAALECMGRNPECSPHVINRVLRQMEEDG
LPVDELFSHCVFRQDERDMVLRAIHTVQPDFQPTINTILQTCSSPLVKDFYTERADAKYP
KMAFSLEELRERFSRQLSMEQASTITIHSVEAMKPVTSHMAKMRXLLAVQRLVWHKALVG
ALRESKMILASSTQKAVRLSLYPYLCLLDEKDYVDIMIQSLSNLPPSGESLHILAKEIGN
RVHNMFCIRTKGHNQMVDKLSHIYNEYTELLAKDSKEFDVLPRERWWKLEAEHSSGPSLL
GDETHWPHMVVVELGTYLVDLMVKHMKVNSDILSSVYDRKLIPVLYHMYTFRSNKQVGFI
KPHPILTQMQQDAMDTTLTFDSYVMPMLCPPVPWTSSKFGAYLLTPTKMMRAVEGANQHE
ILLEKCQDADLHAVLDSLNQLGNAAWRINQPLLDIIISIFNDKGSEKLDVPPPNSEAPKI
PRYNQQDSATFTSAEKAHLKREVVNAKKKCSEMHSLRMDALYKLSIANHMRDEVFWFPHN
MDFRGRTYPCPPYFNHLGSDVTRAVLVFAEGKPLGPGGLEWLKIHLVNLTGLKKRSSLAG
RLEYANSIMDDILDSADNPLIGKKWWQNADEPWQTLACCMEIANAVRSPDPTHFISHFPV
HQDGSCNGLQHYAALGRDVIGATSVNLIPCEEPQDVYSGVAQQVEEFRARDAEKGLKVAQ
VLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDDFPKEFVWDASHYLVHQVFSS
LKEMFTGTREIQDWLTESARLIAKSGSTVEWVTPLGLPIIQPYHRSRTQMLKATIQYLSL
QITHDSKERPDTVKQKNAFPPNFIHSLDSTHMMLTALYCYRAGLTFVSVHDCFWTHAITV
DTMNKVCREQFVALHSQPILQELSNFLLKKYCSGQLSEVKSKKFLEYRRMLLLLAKVPQT
GNFDLQRVKDSTYFFS
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttgagactctgtacctttccaaagtgtctgagtggtcgcatactgttggaa
ataagtgttcgtcgtgtgccatatgccgaccattgccttacaatccggaataacattgaa
aggcacatttcagagccaccatggacatcacaacgaagacatttctcagctctgatccca
aagaaagaagatgggaaaaaacgagtatgggaacaatctcagctgctggatgtgctcgaa
gccaggatccagcaactccaatctgacgtcattgtagatgtccaacatgaaaaggtgcaa
tttgtcaaagcttccaagtcagggataagggcttcttcagggaacagtcccaagaatgtg
tctggggagaggactgaggtgtccaaggcgggacagactattagtaagggagggggtcag
actggtaaaggagagggcaaagatgtctcagcctccaaatcccgctggatggagaaactg
agccaggagaagaagactaaaacaaagaaactgaagcagaagctaggactagaggataaa
cctgtgaaaaccagcaaaggcaaactgatgctaccaggtacctcacataaaaccatatcg
acaaaagcaggaatacagactgcatcaactgttaaaaagagcaaaactctgaaaaaccaa
gagcacaccgtggcagcttcaaagcacgagcacactatggcagctgcactggttgctaac
cctattagaaaagccaaagggaaggggaaagccttgaaggagccgactcctgagttgtcg
gaggccaggaacagggccgaggagctggagaggaaggctgaggccaaggcccgggagctg
gcagaggtggaggagctggagaggaagctgaaccagtgggctgtgtcggccagccctgag
ctcgtgcaggataacagcgaggccagggtgtacggcgacatccagcgcagtgtgcgctgc
tacctggaggcctgtgtgttctgtggggacatcgacagagcccaccgctttctgctcggc
caccaccgtatgctcagccgacgcaacctgctcaacataggactctacaacatcatgatg
agggtctgggccaagaagggcactttaaaccagattggccgtatgttcattctgatagaa
gaggctggtctgaagcctaaccttggctcttactgtgctgctctggagtgtatgggtcga
aaccctgaatgttccccacatgtcatcaacagggtcctgcgtcagatggaggaggatggc
ctgcctgtggacgagctgttcagtcactgtgtgttcaggcaggacgagagggacatggtg
ctcagagccatccacaccgtgcaaccagacttccagcccaccatcaacactatcctgcaa
acctgctcctcaccactagtcaaagacttctacacagagagagcggatgctaaatacccc
aagatggccttcagcctggaggagctgcgggagaggttcagccgtcagctgagcatggag
caggccagcaccatcaccattcactctgtggaggccatgaagcccgtcacctcacacatg
gccaagatgcggyaccttctggcagtgcagcggttagtgtggcacaaagccctggttggg
gccctgagggagagcaagatgatcctggccagcagcacccagaaagccgtcagactcagc
ctctacccctacctctgtctgctggatgaaaaggactatgtagacatcatgatccagagt
ctgtccaacctgcctcccagtggggagtctctccacatcctggccaaggagataggcaac
cgggtccacaacatgttctgcatccgcacgaagggacacaatcagatggtggacaagctt
agccatatctacaatgaatatactgagctactggccaaagactctaaggagtttgacgta
ttgcctagggagcgatggtggaagctggaggcggagcatagctctggtccctccctgctg
ggggacgagacccactggcctcacatggtggtggtggagctgggtacctacctggtggac
ctcatggtcaagcacatgaaagtgaacagcgacatcctcagctctgtctacgaccgaaag
ctcatccctgtgctctaccacatgtacaccttccgcagtaacaaacaggtcggcttcatc
aagccgcaccccatcctgacgcagatgcagcaggacgccatggacaccacgctgaccttt
gactcctacgtgatgcccatgctgtgcccccccgtgccctggacctcytctaaattcgga
gcttacctcctcacccccaccaaaatgatgcgtgcggtggaaggcgccaaccagcatgag
atcctgctggagaagtgccaggatgctgacctccatgccgtgctggactccctcaaccag
ctgggcaacgcggcctggaggatcaaccagcccctgctggacatcatcatctccatcttc
aatgacaagggtagcgagaagctggacgtcccgccycccaactccgaggctcctaagatt
ccccgctacaaccagcaggactcggccaccttcacctctgccgagaaggcccacctgaag
agggaggtggttaatgccaagaagaagtgcagtgagatgcacagcctcaggatggatgcc
ctctataaactctccatcgccaaccacatgagggacgaggtcttctggttcccccacaac
atggacttccgtgggcgcacatacccgtgcccgccctacttcaaccacctaggcagcgat
gtgaccagggccgtcctggtgtttgcggaggggaagcccttagggccgggcgggctggaa
tggctgaagatccacctggtcaacctgacgggcctgaagaaacgcagctcgctggctggc
aggctggagtacgccaactccatcatggacgacatcctggactctgcagacaaccccctc
atcggtaagaagtggtggcagaatgcagatgaaccctggcaaaccctggcctgctgtatg
gagatagccaacgccgtcaggtcacctgaccccacacacttcatctcccactttcctgta
catcaggatggctcgtgtaacggcctgcagcactatgcagccctgggtcgagacgtgatt
ggtgccacctctgtgaaccttattccctgcgaggagccccaggatgtctacagcggggtg
gcacagcaggtggaggagttccgtgcgcgggatgcggagaagggtctgaaggtcgcccag
gtgctggagggcttcatcagcaggaaggtggtgaagcagacggtgatgacggtggtgtac
ggcgtgacgcgctacggaggacgcctccagatagagaagaggctcaaggagattgatgac
ttccccaaggagtttgtatgggatgcctctcactacctggtccaccaggtgttcagcagt
ctgaaggagatgttcaccggcactagagagatccaggactggctgacggagagcgccagg
ctcatcgctaagtcaggcagcacggtagagtgggtgacacccctgggccttcccatcatc
cagccctaccaccgcagccggacacagatgctgaaggccaccatccagtacctgagtctc
cagatcacccacgactctaaagagagaccagacactgtgaaacagaagaatgccttccct
cctaacttcatccactctctggactccacacacatgatgctgaccgctctctactgctac
agrgccggcctgacgttcgtctccgtccacgactgcttctggacccacgccatcacagtc
gacaccatgaacaaggtttgccgggagcagtttgtggcactgcacagccagcccattctt
caagagctgtccaacttcctactgaaaaaatactgctctgggcaactgagcgaggtcaaa
agcaaaaagtttctggagtaccgtagaatgctgctgctgctggccaaagtgccccaaaca
ggcaactttgatctccagcgggtaaaggattccacttacttcttcagctga
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integrated database retrieval system
