Salvelinus sp. IW2-2015 (Arctic char): 111975589
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Entry
111975589 CDS
T05762
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111975589 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111975589 (rubcn)
Membrane trafficking [BR:
salp04131
]
Autophagy
Other autophagy associated proteins
Others
111975589 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
CMD
Motif
Other DBs
NCBI-GeneID:
111975589
NCBI-ProteinID:
XP_023859748
LinkDB
All DBs
Position
LG16:complement(2499452..2521754)
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AA seq
990 aa
AA seq
DB search
MEITAEAEAEERRREHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNHILSHGL
KHEQVYYKQKDYWPFVCCVRYISPHLASHVEQFSKLEPVLNRGIQSVGEGYKAERWLLHS
LQVHLLSAQLRPLLKHQGHTRKYYNEEAFLLKEPHVTAMFQYLEAVEQNNPRLLALVDTV
KLSTLKGPPCVGGLLKSHSLCELPGAGGGWRAGLGKGQGPPMEELNHRLTTSQCSLSHRD
RGHTLNSINTGVISERNSDSIPSARAPGAPWGCVSGSGGEGERGVTPPPRPLAAVPHIAL
TEPASPGPAHSDTLDSGEGDDGPEYLAIGNLVQRCNRRDSQSSTPSSEPGGSGESGGEVP
VQPPMRSSLTVVPPPAPRRSSFSEGQRGQGRGGSKGHIRSMSDMGINHKHRHGGGQRKIT
IIIEDPVAESLVGVDSCVTAYSPFSPAISDVSTPSSLYMESNGSQYSSVSDGMFRKPSEG
QSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNLRRRREEEEDGDDSDSEIQ
QLKQKIRLRRLQIRHTCLPPSQHLFHSTDSGGSCRSSQDSFHMSDSGSAEEVEECELRDG
CEGQSLMAVSRSGLSLSLASLFSDADIKRSVTSSGRSFLTSESISPSFLQSNSAESVAMG
LLRQFEGMQLPAASELDWLVPEQDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLE
WAPPRPQIIFNIHPAPKRKIVVAKQNYRCAGCGTRIDPDYIKRMRYCEYLGRYFCQCCHE
NAQAVVPGRVLRKWDFSKYYISNFARDLLGKIAGDPLFNPNDINSGLYKKNKALETVRVL
RVQLFHMKNLFKTCRLAKEVLDQFDSLPGHLTEDLHLFSLNDLSAVRNGVLATRLRELLK
LGSAHVAGCVLCQAKGFVCEFCGNDKDIIFPFELNKCTRCEECKACFHSKCFRAGKECPR
CQRLAERRERMARKNMEEQEDKEEDEGGGS
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggagattacggctgaggctgaagccgaggaacgcaggagggaacactggaagctgctc
tccagtctgaagaccacggtggagggcctggtgtccaccaacaaccctaatgtgtggtct
cgctacgggggtctacagcggctgcacaaggacatgaaccacatcctcagccacggcctc
aagcacgagcaggtgtactacaagcagaaagactactggccctttgtgtgttgtgtccgc
tacatcagccctcacctggcctcgcatgtagaacagttcagtaagctggagcccgtgcta
aacaggggtatacagagtgttggggaaggctacaaggccgagcgctggctattgcacagc
cttcaggtccacctgctctccgcccagctcagacccctgctcaaacaccagggacacacc
cgcaagtactacaacgaggaggcctttctcctaaaagagccccatgtgacggccatgttt
cagtatcttgaggccgtggaacagaacaacccccgtttgctggcactcgttgacactgtc
aagctgtccactctgaagggccctccgtgtgtggggggcctgttgaagagccatagtctg
tgtgagctgcctggggccggaggaggctggagggccgggctgggcaagggccaggggccc
cccatggaagagctcaaccacaggctcaccacctcccagtgctccctctcccacagagac
agaggacacacactgaacagcataaacacaggggtcatctcagagaggaactcagactct
attccatcagccagagccccgggagccccttgggggtgcgtgtcagggtccgggggggag
ggcgagaggggtgtgactcctcctccccgccccttggcagctgtcccccacattgccctg
accgagcccgcctccccaggccctgcccactcagacaccctagactctggcgagggcgac
gacggcccagaatacctggccatcggtaacctggtgcaacgctgcaatcgccgtgactcc
cagagctccacccccagcagcgagcccggcgggagtggcgaatcaggtggcgaggttccg
gtccagccgcctatgcggagctccctgactgtggtcccgcctcccgctccgcgaaggtca
tccttctcggagggacagagggggcagggtcgcgggggcagcaaggggcacatccgctcg
atgtctgacatggggatcaaccacaaacatagacatggagggggccaaaggaaaatcacc
attataatagaggaccctgtagcagaatcgttggttggagtggacagctgtgtcacggcc
tacagccccttctcccctgccatcagtgatgtcagcacacccagctccctctatatggag
tcaaatggctcccagtacagcagtgtttcagacggcatgttccggaagccgtcagagggc
cagagcctcatcagctacctatcggagcaggacttcggcagctgtgctgacctggagaag
gagaacgcccacttcagcatctctgagtctctgattgccgccatcgagctgatgaagtgc
aacctgcggcggcggcgggaggaggaggaggatggcgacgacagcgactcagagatccag
cagttgaaacagaagatccgcctgcgcaggctgcagatccgacacacctgcctgccgccc
tcacagcacttgttccactccacagacagcggaggctcctgcaggagctcccaggattcc
tttcacatgtccgactcgggctctgccgaggaggtggaggagtgtgagctgagagatggc
tgtgaaggccagtccctgatggcggtgtcaaggagcggcctctccctgtcgctcgcctcc
ctcttctcagatgcagacataaagcgcagtgtgacgtccagtggccgctcgttcctcacc
tcagagtctatctctccgtcgttcctccagtctaactcggctgagtcggtggccatgggg
ctgctcaggcagtttgagggcatgcagctccccgcagcctcggagctcgactggctggtc
ccagagcaagacgcaccgcagaagctcctgcccatccctgactccctgcccatctctcct
gatgacggggagcatgctgacatctacaagctgaggatccgggtgcgagggaacctagag
tgggccccgccccgaccccagataatcttcaacatccaccccgcgcccaagaggaaaata
gttgtggcgaagcagaactaccgctgtgcaggctgcgggactcgcatagacccagactac
attaagcgaatgcgctactgtgagtacctgggccgctacttctgccagtgttgccacgag
aacgcccaggcggtggtgccgggccgcgtgttgaggaagtgggacttcagcaagtactac
atcagcaacttcgcccgggacctgctgggcaagatcgccggagaccccctgttcaacccc
aacgacatcaacagtggcctctacaagaagaacaaagccctggagactgtccgggttttg
agggtccaactcttccacatgaaaaacctcttcaagacatgccgcctagctaaagaagtg
ctggaccagtttgacagcctcccaggtcacttgactgaggacctgcacctgttctccctc
aacgacctcagtgctgtgcgcaacggagttctggccacccggcttcgagagctgctgaaa
ttgggttccgcgcacgtggctggctgtgtgctctgtcaggccaagggttttgtgtgtgag
ttctgcggcaacgacaaagacatcatcttccctttcgagctgaacaagtgcacacgctgc
gaagagtgcaaggcgtgtttccacagcaaatgtttccgggcaggcaaggagtgcccgcga
tgccagcgcctggcagagaggcgggaaaggatggcacgcaagaacatggaggagcaggaa
gataaggaagaggacgagggaggtgggagctag
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