Salvelinus sp. IW2-2015 (Arctic char): 111975615
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Entry
111975615 CDS
T05762
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111975615
Membrane trafficking [BR:
salp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
111975615
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
SNAP
Motif
Other DBs
NCBI-GeneID:
111975615
NCBI-ProteinID:
XP_023859807
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All DBs
Position
LG16:complement(31454495..31551332)
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AA seq
1367 aa
AA seq
DB search
MSQCVQSVQEFIQDSFVPMVAVLCSEDAEKVTRKNNLNFSELLRPFCRLTSEGHMRDPNN
QVQVVKNLRISVNNVVTXPSVPTAGVHSPAQRRLLSEVVSACQPAEGGVANVITAGDYDL
NISDRSVKASVPWYSDWRDTLTELSTSKHYTATTPWFEAYRESFLQSMPASDHEFLNHYL
ACLLVVSSSEAVPVEQFLKLSQEQHRIQHNGEYTNPKWFIPNTLKYYVLLHDMSQGEEQR
ADSVYEDMKQRYGSQGCYLLKINSRTAAAGTDEQIPDPWSQYLNKSSLQSQDQSEXPAPT
PVVVNNTAVENNVGGAPEMDGHDSAENDGVSVNSLDNTHPLQLETAIDMPGSLDSLRAIA
AETNTTTVYTGVAAGTSHGACLTLNDHNRLRLFIQEFTFRGLLPHIEKNIRRLNDQLVSR
KGLSRSLFSVTKKLFGGGKVPEKSIAELKNTSGLLYHPEAPELQIRKMADLCFLVQHYEL
AYSCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQGGAPRPYPAHYMDTAIQTYRDVCKN
KVLAERCALFSAEVLKSQAKYSDAATLLIKMTSEDSDLCSALLLEQAAHCFINMRNPMVR
KFAFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQPE
NAVSAFRHIFTNDSQQTSTQQGAFLREYLYVYRNVPGVCEVALPQLPLPCINSSATRVYF
GHERRLAEGEKQAATHVSLDQEFDRDLAAVWQDLEEQVVAAANRGVVPSTFYSTQCCLNS
QTDNLHIPLAVVEEPIIVEVAFRNPLKVPLVLSDLSLLWKFTLKDFSRPQPQDVMVGDAV
TISNEKEAIAPMTVQKDDIITTEVIPEFYMSPEETRVARLKLLPRQTGQLNILGLVYNLA
STLSTGDSTINSNSFSQNQGPSATAGTSVRGRQDLEIQGPRLNQTKEEKTSVSHGPDRRL
DPSITPPMPLLEVFFLQFPTALLCGEIRKAYVEFCNVSHVPLCGLRVASTHPDFFTFGSS
SLATPLTPLSPTSFENCSAYKTLATPPGATPGSVTAVTLVSAADFGSGGGVFGTGGKRVA
EIPLGEGTLTPGESTQLPLWLRGPDQEGVHEINFLFYYESAEKGGKISHRVLRHTVFICA
SRSLSVRATACRSNTLPEEEREEGRNGSMLVFVDVENINTSEAGVREFHIAQVSSSSKQW
RLHKCINPAEDKDCKLTTRERGKLCFRATRCKPHEATSKSLEKYTFADLSLGNEQILSST
TPCADFFFRRCQPSESCRPLIAVETQGRHSRSQGAGPGGGAEDITGVVRKCNEVDLNIIV
LWKAFVVEDNKQVILEGQLHVALQTIGKEACSLTQKEEAQEMVLREV
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtgcgtacagtctgtgcaggagttcatccaggactcgtttgttccgatggtg
gctgtactgtgcagcgaagatgcggaaaaagtgactcgtaaaaacaaccttaatttctcg
gagctgttaagacctttctgccggctaacctccgaaggtcacatgagggaccctaacaat
caggtgcaggtggtgaagaaccttcgcatcagcgtcaacaatgtggtgacargcccgtct
gtccccaccgccggagtccatagccccgcccagcgacggctgctcagcgaggtggtgtcg
gcatgccaaccagcagaggggggtgtggccaatgtcatcaccgccggagactatgacctt
aatattagtgatcgctctgttaaagctagcgtcccctggtacagtgactggagggacaca
ctaacggaactcagcacctccaagcattatacagccacgactccctggtttgaggcgtac
agggagagcttcctccagtcaatgcctgcctctgaccatgagttcctcaaccactacctc
gcctgtctgttggtggtgtcgtccagtgaggctgtaccagtggagcagttcctcaagctg
tctcaggagcagcacaggatccagcacaatggagagtacaccaaccccaagtggttcatc
cccaacacactcaaatactacgtcctcctgcacgacatgagccagggggaagaacagaga
gctgactctgtgtatgaggatatgaagcagaggtatggttctcagggttgttaccttctg
aagatcaactctcgtacagcagcagcaggaacagatgaacagataccggacccatggagc
cagtaccttaacaagagcagtctgcaaagccaggatcagtctgaggamccagccccaacc
cctgtagtggtgaacaacacggctgtagagaacaacgtaggaggagcaccagagatggac
ggacatgactcggcagagaatgacggagtctctgtaaacagtctggacaacacccaccct
ctccagctggagactgccattgacatgcccggtagcctggactccctcagggctatcgcc
gcggaaaccaacactacgacagtctacacgggagtggcggcgggcaccagccatggggca
tgtctaacgctgaacgaccacaaccgcctcagactattcatccaggaatttaccttcagg
ggactactacctcacatagagaagaacattagacggctcaatgatcagctggtctccagg
aaaggcttgagtcgctctctgttctcagtcactaagaagttgtttggaggagggaaagtt
ccagagaagagtattgctgaactgaagaacacttccggccttctctatcatccagaagcc
cctgagctgcagatcaggaagatggctgacctgtgtttcctggttcagcactatgagctg
gcctacagctgctaccacacggccaagaaggacttcttatctgaccaggccatgctctat
gccgctggggcgctggagatggcagcagtgtctgcgtttctccagggtggggctccacgg
ccgtatccagcacactatatggacacggcaattcagacctacagagatgtgtgcaagaac
aaggtcctagctgagcgttgtgctctgttcagtgctgaggtactgaagagtcaggccaag
tactctgatgctgctaccctcctcatcaagatgaccagtgaggactctgatctgtgttct
gccctcctattggagcaggcagcccactgcttcattaacatgcgaaaccccatggtcagg
aagtttgccttccacatgatcctggcaggacaccgcttcagcaaggcaggacaaaagcgc
catgcgttgcggtgttactgccaggccatgcaggtatataagggtaaaggctggtccctg
gctgaggaccatatcaacttcactatcggccgccagtcctttacgctgcgccaaccagag
aacgctgtctcagccttcagacacatcttcaccaacgacagccagcagacctccacacag
cagggagccttcctccgggagtacctctacgtctacaggaatgtgccaggggtgtgtgag
gtggcactaccccagctgcccctaccctgcatcaacagctctgctaccagggtctacttt
ggccacgaacgccgcctggcagagggtgagaagcaggctgccacccatgtgtccttggac
caggagtttgaccgggacctagctgccgtgtggcaggacctrgaggaacaggtggttgcc
gccgccaaccgtggggttgtcccgtcaacgttctactctacccagtgctgcctcaacagt
cagacggacaatctccacatcccgctggctgtagtagaagaacccatcatagttgaggtg
gcgttccggaaccctctaaaggttccgctggttctctcagacctctcgctgctctggaag
ttcacgctcaaagacttctctcgaccacaaccgcaggacgtcatggttggagacgctgtc
accatcagcaatgagaaggaggccatcgctcccatgacagtgcagaaagatgacatcatc
accacagaagtcatcccagagttctacatgagccccgaggagacaagagtggctcgtctg
aagctgcttcctcgccagacaggtcagctcaacatcctgggtctggtctataacctggcc
tccaccctttctactggagactctactattaacagcaacagtttctcgcagaaccaaggt
ccctcagcgaccgcagggacatcggttcgtggtcgacaggacctagagattcagggaccg
cggttgaaccagaccaaggaggagaagacctctgtcagccacggtcctgaccgacgtctt
gacccctccatcacccctccaatgcccctgctggaggtattcttcctccagtttcctact
gccctactatgtggtgagatcaggaaggcctacgtggaattctgtaatgtgagtcacgtt
cccctgtgcggcctgcgtgtggcgtccacgcacccagacttctttaccttcggaagctcc
tccctagccacacccctcacccccctcagccccacctcatttgagaactgctctgcctac
aagaccctggccacacccccaggagccacgcccgggtcggtaaccgcggtaacgctggtg
tcggcggctgactttgggtcgggaggaggagtgtttggtacggggggtaaaagggtagca
gagatccctctaggagagggaacgctaacgcctggagaatctacccagctacccctgtgg
ctgagaggaccagaccaggaaggagtccatgagatcaacttcctgttctactacgagagc
gccgagaaaggaggaaagatcagtcacagggtgctgcgtcacacagtatttatctgtgcc
agtcgttctctgtcggtccgggccaccgcctgccgtagtaacacactgcccgaggaggag
agagaggaggggaggaatggcagcatgctggtctttgtcgatgtggagaacatcaacaca
agtgaggctggggtgcgtgagttccacattgcacaggtctctagcagcagtaaacagtgg
agactacacaagtgtataaacccagcagaagacaaagactgcaaactcaccaccagagag
aggggcaagctgtgcttcagagcaacacgatgcaaaccccatgaagctacctcaaagtca
ctagagaagtacacctttgcagacctgagccttggaaatgaacagatcctcagctccacc
actccgtgtgcagacttcttcttccggaggtgtcagccctcggagtcttgtagaccgctt
attgccgtggagacacaggggagacattccaggagtcagggggcgggtcctgggggtggg
gctgaggatataacaggtgtggtcaggaagtgcaacgaggtggacctcaacatcatcgtc
ctctggaaggcatttgttgttgaagacaacaagcaggtgatcctggagggacagcttcat
gtggcactacagaccattggcaaagaggcctgctccctcacacagaaagaggaggctcaa
gagatggtgctgcgtgaagtttaa
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