Salvelinus sp. IW2-2015 (Arctic char): 111975648
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Entry
111975648 CDS
T05762
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111975648
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111975648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
DUF768
MCP_V20_C
Motif
Other DBs
NCBI-GeneID:
111975648
NCBI-ProteinID:
XP_023859884
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All DBs
Position
LG16:complement(20952599..20962096)
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AA seq
1222 aa
AA seq
DB search
MAKIQAHSNTKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYNK
FLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGVVFLQSPF
SAQVSPGQGKSIASPAVSATGSSVAEAGSAQSEAVASPESISSSSGPPEPPSRLSLPLPS
RESQSQPQSSSVSPPASEPSPVEFDSAISYVNKIKNRFLDHPEIYRSFLEILHTYQVHCV
INMKEQLDVKESRGRSSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTGSSL
TGKDQLKRAEDEDMSKHSKKRSRPMLLPHMTPLLKKKMKFSCSQDQSFASVGKHGVLREF
TFFDKVRRFFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFLGD
KELSHSMSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTAICKEVLND
TWVSFPSWSEDSTFASSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRL
SPEDQDRFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKE
EEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESVYDERQEQ
STEEGGVGQQGRDGSSAAVVSEPHMVFTYEDKQILEDAASLIIYHVKRQPTIHKDDKDHI
KRIIQHFVPDLFFSRRGELSETEEWTDEEAEVEERGDRGGGGSSSITGAVAAPVGQPQQQ
QQLNGESRRRRCTSPQTVELGGASSHSLAPEGGEKVDLRDPEAEHQKELDGVYNLFFVNN
NWYFFLRLHQTLCQRLLRVYRQAERQLLEHRAEQNRERLLMAEGRRDKASDLAMELRLKQ
PSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNTIRQLQ
HLVSDEVCLQVAELYLAERKRGAAGGNLSSQCVRAAWETSYQWKSERVMAEENCFKVLFI
QNKGQVTLTIELLDTEEAQADDPLDVQCLSSYMEQFVGTESTLCSQTEGYFFKPVFLPRN
LRHFRRWQVRQVEAMRCRREWHRQLGVESAGSLDCRFKLNTHKMVFVMNSEDYMYRRGAL
VKARKSQHRVAVKQHERFDKWHQGWLAEHVPPAADRSVHDWLMGEEEEDMIPCKTTCLNT
QVKGLPVNRYQVHYSRKPPSSP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattcaggcacacagcaacacgaagcaaataaaccaaattcaagacaaggcc
tatgttgtacaaaaacaagtgcaacaacagcactttcagaaactgaaggttgaagatgct
ctatcatacctggaccaagtgaaaatacgatttgggaatgaccctggaatatacaacaaa
tttcttgacataatgaaagaatttaaatcacaaagcattgacacaccaggtgttataaac
cgtgtgtctcagctcttccacggacacccggaccttgtcttgggattcaatgccttcctg
cccccaggctatcggatagagattcccaagaatggagtggttttccttcagtcacctttc
tctgcccaggtctccccaggccaggggaagagtattgcaagccctgctgtgagtgccact
ggctcatctgttgctgaagctgggtctgcccaaagtgaagctgtggcatcgcctgaaagc
atctcctcgtcctctggacccccagagccccccagtagactgtccttgccactccccagc
agagagagccagtcccagccacagtcctcctcggtgtccccccctgcctcggagcccagc
ccagtagaatttgacagtgctatcagctatgtcaacaagatcaaaaaccgcttcttagac
catccagagatctacagatccttccttgagatactacacacttaccaggtacactgtgtc
atcaatatgaaggagcagcttgatgtcaaggagagccggggtcgtagtagtagtgggatg
acagaggatgaagttttctcaaaagtggccagcctcttcaaaggrcaagaggacttactg
gctgagtttggacagttcttaccagatgctaagagatcattgttcactggcagctccctg
acagggaaagaccaactgaagagggcagaggatgaggatatgagcaaacatagcaagaag
agatcaaggcccatgctgctgccgcacatgacgccactgctcaagaaaaagatgaagttt
tcgtgctcccaagaccagtcctttgcctcagttgggaagcatggagtcttgcgggagttc
accttttttgacaaggtccgacgtttcttcaagagccaggaggtgtatgaaaacttcctc
cgctgcattgctttgtttaaccaggaagtggtttcgggagcagagctgctgcagcttgtc
accccctttttggggaagtttccagagctatatacccagttcaagtcatttctgggggac
aaagagctctctcattcaatgtcgggcctgtcagaccgctacatggaagggggtgggggc
agggaggttgactatgcatcttgcaagcgcctgggatctagctacagagcactacccaag
acttaccagcagcccaagtgcagcggtcgcactgccatctgcaaagaggtgttgaatgac
acttgggtttccttcccctcgtggtcagaggactctacgtttgcaagctctaagaaaacc
ccatacgaggagcagcttcatcgctgtgaggatgagaggtttgaattggatgtggtcctg
gagacaaacctagccaccatccgggtcctggagagtgttcagaagaagctgtcccgtctg
tcgcccgaggaccaggaccgcttccgtctggacgactgtctgggtggcacctctgaggtc
atccagcgccgagccgtctaccgtatctatggcgataaggcccctgagattatagagggt
ctgaagaggagccctgctactgctgtgcctgtggtgctcaagagattgaaagcaaaggag
gaggagtggagagaagcccagcagggcttcaacaagatctggagggagcagtatgagaag
gcctacctcaagtccctggaccaccagggggtcaacttcaagcagaatgacatgaaggcc
ctccgatccaagagcctgctcaatgagattgaaagtgtttatgatgaacgtcaggagcag
agcacagaggaggggggcgtgggccagcaggggcgtgatgggagcagtgcggcagtggtc
agcgagccacacatggtgttcacctatgaggacaagcagatcctggaggatgctgcctcc
ctcatcatctaccacgtcaaacgccagcccaccatccacaaggatgacaaggaccatatc
aagcgcatcatccagcactttgtccctgacctattcttctcccgccgcggcgagctcagc
gagacggaggagtggacggacgaggaggccgaggtggaggaacgaggagaccgaggaggt
ggtggtagcagcagcataacaggagcagtggcagcacccgttggccagccgcagcaacaa
cagcaactgaacggggagtcgaggcggcggcgctgcacctctcctcagacagtggagctg
ggtggagcctcctctcacagcttggccccagaaggaggggagaaggttgacctgagagac
cctgaggcagagcaccagaaggagctggacggagtctacaacctattctttgtcaacaac
aactggtactttttcctgcggctgcaccagaccctgtgccagcggctgctgagggtgtac
cggcaggcagaacggcagctgctggagcaccgggccgagcagaaccgtgaaaggctgctg
atggcagagggccgcagggataaggctagcgacctggccatggagctccgcctcaaacag
ccaagtgaggtggaactggaggagtactacccagcgtttttggacatggtgcgcagtctt
ctggatgggaacctggagtctacgcagtatgaggacacactgcgggagatgttcaccatc
catgcctacatcggcttcaccatcgacaagctcatccagaataccattagacagctgcag
cacctggtgagtgacgaggtgtgcctacaggtggctgagctgtacctggctgagaggaag
aggggcgcagcgggggggaacctgtcgtcccagtgtgtgagagcagcctgggagaccagc
taccagtggaagtctgagagggtcatggctgaggagaactgcttcaaggtgttgttcatt
cagaacaaaggccaggtcaccttgaccattgagctgctggacacagaggaggcccaggcc
gatgatcccctggatgtgcagtgcctgtccagctatatggaacagtttgtagggacagag
tcgacgctttgctcgcagactgaaggctactttttcaaacctgtatttttgcccaggaac
ctgaggcacttcagacgctggcaggtgcgccaggtggaggcgatgcgctgcagacgggag
tggcacaggcagctgggcgtggagagtgctggcagtctggactgccgctttaaactcaac
acccacaagatggtattcgtcatgaactctgaggactacatgtaccgccggggagcgctg
gtcaaagccaggaagtcccagcacagggtggctgtgaaacagcacgagcgctttgacaag
tggcaccagggctggctggcagagcacgtgcctccggcggccgatcgctcggtccacgac
tggctgatgggtgaggaggaagaagacatgatcccctgcaagaccacctgcctcaacaca
caggtcaaaggcctgcctgtcaacagataccaggtgcattacagtaggaaacccccctcc
tctccctag
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integrated database retrieval system
