Salvelinus sp. IW2-2015 (Arctic char): 111975693
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Entry
111975693 CDS
T05762
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111975693
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
111975693
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
111975693
NCBI-ProteinID:
XP_024003335
LinkDB
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Position
LG16:complement(8959899..8975494)
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AA seq
835 aa
AA seq
DB search
MMEVAYVCEWEKRPKSNHCPSIPLVCAWSCRNLVAFTTDLKNEEDEKEVSHMVHIIDTEH
PWDVYSIYSGHAEVISCLEWDQSGSRLLSADGDGQIKCWAMADHLVNSWETSLGSAVDGD
PIVALSWLHNGVKLALHVEMSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVT
VSLLKPNGQLLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSSSSPVQFYKVCVSVV
NEKCRIDTELLPSLFMRCTTDPVRRDKXPAVTHLKFLTRENSDQVLLCASSQTGSIVECW
SLRKEGLPVNNIFQHRSPVVGEKQPMILKWRILSATNDLDRVSAVALPKLPISISNPDLK
VASDTKFCPGLGLALAFHDGSIQILHRLSLHTMGVFYGSSSGSSQRPGDEPAIKRQRAGG
HTVHFKALQFSWTSLALAGVDNHGKLHMIRVSPSMGQMLDMNTLLRHLLFLLEYCMVTGY
DWWDVLLHVQPGMVHNLVEKLHEEYMRQNQALQQVLSTRIVAVKASLCKLSVATAARACD
FHAKLLLIAISATLKSLLRPHVLNTPDKSPGDRLAEICAKNTDTDIDKVMINLKTEEFVL
DGPPLQSLQQLIQWVGDFVLYLMANLPNQGSIVRPGFGFLRDGSSLGMLREMMVMIRIWG
LLKPGCLPIYTATSDNQDSMSLLFRLLTKLWLCSRDEGHPQEPDEPLIDECCLLPSQLLV
PSMDWLPVNDGIICKLQGKQPLRLQFGKPYSLPGLNSTAQVEIFSRSPGAQRMDNLRCLH
MGVCPTEESKACTRCGCVTMLRSPNKTNAMKQWEQRWIKNCLCGGLWRRVPSTLS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggtggcctatgtttgtgagtgggagaagagacccaagagcaaccactgtcca
tccatcccactggtgtgtgcctggtcctgcaggaacctagttgcctttaccacagaccta
aaaaatgaagaagatgaaaaagaagtcagtcatatggtccacatcattgacacagagcac
ccatgggatgtgtactccatttactctggacatgccgaggtcatatcctgtctggagtgg
gaccaatcaggttccaggttgttgtctgctgatggagacgggcagatcaagtgctgggcg
atggcagatcacctggtgaacagctgggagacttcactagggagtgctgtggacggagac
cctatcgtagctctgtcctggctgcataatggagtcaagctggctctgcatgtggagatg
tcgggctccaccaacttcggggagaagttttcacgggtcaagttctcgccgtctctcacg
ctgttcgggggtaagcccatggaaggctggctggcagtaacggtgagcggcctggtcacg
gtgtccttgctgaagcccaacggacagctgctgacagccagcgagagcctgtgtcgcctg
aggggccgtgttgccctggccgacatcgcattcaccggcgggggcaacatcgtggtggcg
gcaacggacggcagtagctcctcacctgtgcagttctacaaggtgtgcgtgagcgtggtc
aacgagaagtgtcgcatcgacacggagctgctgccctcgctctttatgcgctgcaccaca
gacccggtcaggagggacaagtkcccggccgtcacacacctcaagttcctcaccagggag
aactcagaycaggtgctgttgtgtgcctccagtcagacgggcagcatcgtagagtgctgg
tcactgcgaaaagaaggcctccctgttaataacatattccagcatcgctcaccagtagtg
ggtgagaaacagccgatgatcttgaaatggcgcatcctctcagccaccaatgacctggac
cgcgtgtcggccgttgctctgcccaagctgcccatctccatctccaaccctgacttaaag
gtggcgtcggacacaaagttctgcccaggcctcggcctggccctagccttccacgatggc
agcatccagatcctccaccggctgtccctccacactatgggcgtgttctacggctcctcc
tcgggctcctcccagcggcccggggacgagccggccatcaaacggcagcgtgccggcggc
cacaccgtccacttcaaggccctgcagttctcctggacctcgctggccctggccggagtg
gacaaccacggcaagctgcacatgatccgtgtgtctccctccatgggccagatgttggac
atgaacacactgctgcgccacctgctgttcctactggagtactgcatggtgacgggctac
gactggtgggatgtgctgctccatgtgcagccgggcatggtccataacctggtagagaag
cttcatgaagagtacatgagacagaaccaagccctgcagcaggtgctctcgacacgcatc
gtcgcagtgaaggcctctctctgtaagctgtcygtggctacggcggcgcgagcctgcgac
ttccacgccaagctcctccttatcgccattagcgccaccctcaagtccctgctgaggccc
cacgtcctcaacacgccagacaagagccccggggataggctggcagagatatgcgccaaa
aatactgacactgatatcgataaggtgatgatcaacctgaagacagaggagtttgtgctg
gacggccccccgctccagtctctgcagcagctcatccaatgggtgggagactttgtgctc
tacctgatggctaacctacccaatcagggctccatcgtgcgtcccggctttgggttcctg
cgcgacggctcgtccctgggcatgctgcgtgaaatgatggtgatgatccggatctggggc
ctgctgaagcctggctgcctgcccatctacacggccacctcggacaaccaggatagcatg
tccctcctcttccgcctgctcaccaagctctggctctgctctcgggacgagggccacccc
caggagcctgatgagccgctgatagacgagtgctgcctgctgcccagccagctgctggtg
cccagcatggactggctgcctgtcaacgacggcatcatctgcaagctgcagggcaagcaa
cctctgcggctacagtttggcaagccctacagccttccgggtctcaactccaccgcccag
gtggagatcttctctaggagcccaggggcccagaggatggataatctacgttgtctccac
atgggagtctgtcccacagaggagagcaaagcctgcacccggtgtggctgtgtgaccatg
ctccgctcgcccaacaagaccaacgcaatgaagcagtgggagcaacgctggatcaagaac
tgcctgtgcggaggcctctggagaagggttccctccacactgtcctga
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