Salvelinus sp. IW2-2015 (Arctic char): 111975719
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Entry
111975719 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 2-like
KO
K20994
Notch 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111975719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
EGF_2
Ank_4
EGF_3
JAG1-like_EGF2
EGF_Teneurin
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
111975719
NCBI-ProteinID:
XP_023860029
LinkDB
All DBs
Position
LG16:16856119..16883406
Genome browser
AA seq
2490 aa
AA seq
DB search
MGQLPGFASDKVLVFVVCCIRLSLALQCLDAVKPCVNNATCATFTNGTGYCSCAAGFLGE
YCHHKDPCHPGYCLNGGNCSVAVSGIPGSPTCSCPLGYTGQHCQTPQNSTCYPNNPCANR
GVCNLLSLDKYKCQCAHGWTGIRCERVDTCLPGPCANGGTCSSLSGGKFSCTCPAGYWGP
RCLNDTDECAASAPVCQNQGACVNTPGSYRCNCAPGFTGRHCETPYIPCTPSPCLNGGTC
RQTSETSYWCHCLPGFNGTNCDNNIDDCPDHHCQNGGTCMDGVNTYNCKCPPEWTGQSCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSENIDDCATAACTKGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYKGSTCNDDI
NECIIGPNPCEHGGLCVNTDGSFTCNCARGYGGPRCETDINECVSSPCQNDGTCLDRIGD
YSCICMEGFEGTHCEIDINECASSPCLNQGICLDQVKRYICQCPLGFSGEMCQIDIDECS
STPCLNGAKCIDRPNGYECECAEGTNRVCVCNIDDCDPEXCHHGVCREWHSPRFSCELRP
GHTPASICNIQVMEAQANPAERADGCIDLVQQSTQCNWSAWHSGVNCEINVDDCASNPCE
YGECQDGINEYKCVCAPGYTGAKCDVDINECNSSPCMSGGTCVDKVNGFICQCPPGTHGP
LCHSGTDHCAPRPCVHGDCVEQQSGYHCECESGWVGQHCGQEKDECQSSPCQHSGSCVDR
LNGYSCQCRPGFTGVNCEVNIEECASSPCENHGTCVDGVNSYTCLCAAPYSGKHCEEELV
PCASHPCERGGVCQPTPDYTFYTCRCPSGWQGPRCTEDVDECRKNPCQNSARCINSHGSY
VCKCQPGYSGLNCQTNIDDCSPNPCLNGGSCVDGVGGFSCDCRPGFDGERCEAEMDECAS
QPCRNGAVCQDYVNSFVCECRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRCRP
GFYGTFCQYEQNECDSQPCKNGGTCTDGLGSYRCTCPVGYNGQNCQNFVNLCSQPLCRNG
GSCSQSQTTWSCHCPVGWTGLYCDVPNMSCQDYAARNGIPVEMVCKHMGCCVNVGNAHQC
QCQPGYTGSYCDKTVDECQSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHSNP
CRHGGTCINLINRFSCACPPGTHGVQCEVNMDDCAPKPGSWGPRCLNGGQCMDGVGRYTC
SCPPGFAGEHCEGDVNECLSGPCHSPGSLDCVQLVNDYQCRCRLGYTGRLCESMVDLCQS
KPCHNSGTCSMNMSSVHGYSCTCQPSFTGFNCGEVEGYNCAQLRCQNGGHCQDSQGGHLH
CRCQPGFSGSRCETVHSCQNRPCLNGGTCMKDPHNPYQYSCRCPAHFSGRHCENVIFDQS
PRTPSCPYVECEQRSGDKVCDPQCNNHECQWDGGDCSLHWRRPWVNCTASVPCWELFRNG
RCDHECDNSGCLFDSFECQESTKSYCKYDDYCADHYANKICDKSCNTEACGWDGLDCSED
TPAKVVDGTLVIVVLLQPEELLGDVRGFLRSLGTLLHTNLRVKMDAQQKLMVYPYYGLEH
DNAIEGQSATMKRRGKRELDKEVIGSKVYLEIDNRECAESSMDCFSSTELAASFIAAEYL
KSALPYPVVSVDSDHMDPQKPPFMLYLAVGAAVIILLILVLGVLAAKRKRKHGILWLPDG
FLAKKDDKRREPLGQDDFGMKNFKTQDGGMMDGGQRWMEEEAPPKKPRTEDKPLLPLGVD
GGVDRREWTLQHHKAADISLTPPQADLEADCLDVNVKGPDGFTPLMLASLRNGGASDCGL
QAEEEEESGGDEPGPNVISDLITQGATLIAQTDRTGETALHLAARYARADAAKRLLDAGA
DANAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVE
ELVHCHADINAVDNHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREG
SFEAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGG
VGHSRVCGGNGAGYMGMRPGPQGKKSRRGGGKVGGSGGGTAKELKDMKAKRRKKPTGGEG
PAVGAVGGANGNGTKAAGGLSESSVTMSPVDSLESPHSYTGDAAVASNTAKSPPLLSSPS
SRPLLPPVSHMLGQQQSWLGLKHGYGGHMFSLLPQQMGNGHSGISQHHGQGLLTPMNVTM
SREQLPPIVTFQMMAPGGGQALLKQPQPGQVQSQGQNQCQPRSQQGPTHLHCTQGMMYQM
PGVGLQHSLSHSLPHSHSLAHSHGMVHDGQSRQQLPPYQAIQSPVDKYPTPPSQHSYATA
GSEGTTPGHPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHALPPP
RHTHIPEQPQSQQTQQNPQQHQHGNMQVFV
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccggttttgcttcggacaaagtattagtcttcgtcgtctgctgcatt
cggctttctttggctcttcagtgtctggatgctgttaagccgtgtgtgaacaatgctacg
tgtgccaccttcaccaacgggacagggtactgcagttgtgccgcaggcttcctgggtgag
tactgccatcacaaagacccgtgtcatcctggttactgtctgaatggagggaactgctca
gtggctgtgtcgggcatcccgggcagccccacctgctcctgtcccctgggctacaccggg
cagcactgtcagactccccagaactccacctgctatcccaacaacccttgtgccaacaga
ggagtctgcaacctgctctccctcgacaagtacaagtgccagtgtgctcacggatggaca
ggcatacgatgtgagcgtgtggacacctgtctaccaggaccctgtgctaacggaggcacc
tgcagctctctgtccgggggcaagttcagctgtacctgtcctgcaggctactggggtccc
cgctgtctcaacgacactgacgagtgtgctgcctccgccccggtgtgtcagaaccaaggg
gcgtgtgtcaacacccccggctcctacagatgtaactgcgcccccgggttcaccggccgc
cactgtgagaccccctacatcccctgcaccccctcgccctgcctcaacgggggcacgtgt
cgccagacttctgagaccagctactggtgccactgcctgccaggtttcaatgggactaac
tgtgacaacaacattgacgactgccccgaccatcactgccaaaatggagggacctgcatg
gatggcgtcaatacctacaattgcaaatgtcccccggaatggactggtcagtcctgtaca
gaggatgtggatgagtgtcgtctgcagcccaacacgtgtcagaacggagggacctgcagc
aacatccagggcagctacacctgtgtgtgtgtcaacggctggagtggcctggactgctct
gagaacatagatgactgtgctacggctgcctgcaccaagggctccacctgtattgaccgt
gtggcatccttcctctgtgtctgcccctatggaaagacaggtttgctgtgccacgtgaac
gatgcctgcattagtagcccgtgccgggacggggcgcagtgcgacaccaaccccatcaac
ggcatgttcaactgcaactgtgccccaggctacaagggaagcacctgcaatgacgacatc
aacgagtgcatcattggtccaaacccctgtgagcatggaggattgtgtgtgaacacggat
ggctcgttcacatgtaactgtgcgagaggttatggtgggccgcgctgtgagacagacatc
aatgagtgtgtctccagcccctgccagaacgacggcacctgtctggaccgcataggagac
tacagctgcatctgtatggaaggatttgagggaacacactgtgagattgacatcaacgag
tgtgctagctctccatgtctgaaccaagggatctgtctggatcaagtcaaacgctacatc
tgccagtgccctctaggattcagtggggagatgtgtcagatcgacattgacgagtgttcc
agcacaccctgcctcaacggggccaagtgtatcgaccgtcccaatggctacgagtgtgaa
tgtgctgaaggtactaaccgtgtgtgtgtgtgtaacatagatgactgtgacccggagncc
tgccaccatggtgtgtgtcgtgaatggcattcgccacgcttctcctgtgaactgcgaccc
gggcatacaccggcttccatatgtaacatccaggtcatggaggcccaggcaaaccccgcc
gaacgtgcggacgggtgcatcgacctagtccaacaaagtacgcagtgcaactggtctgcc
tggcactcaggggtgaactgtgagatcaatgttgatgactgcgccagtaacccctgtgag
tatggggagtgccaggatgggatcaatgagtacaagtgtgtctgtgctccagggtacaca
ggtgcaaaatgtgacgtggacatcaatgagtgtaattccagcccgtgtatgagtggtggc
acatgtgtagacaaggtgaacggcttcatctgccagtgcccccctggcacccacggcccc
ctgtgccactctggcaccgaccactgtgccccccggccctgtgtacacggagactgtgta
gagcagcagagcgggtaccattgtgagtgtgagtctggctgggtggggcagcactgtggc
caggagaaggatgagtgccagtccagcccctgccagcacagtggcagctgtgtggacaga
ctcaacggatactcctgccagtgtcgccccggattcacaggtgtgaactgcgaggtcaac
atagaggagtgtgcatcaagcccgtgtgagaaccatggtacctgtgtggacggagtcaac
agctacacctgcctgtgtgccgctccgtactcaggaaaacactgtgaggaggagttggtt
ccctgtgcgtctcatccatgtgagcggggaggtgtgtgtcagccaaccccagactacacc
ttttacacctgtagatgtcccagcggctggcaaggccctcgttgcactgaggatgtggat
gagtgcaggaagaacccgtgtcagaacagcgcccgttgcatcaacagccayggcagctac
gtgtgcaagtgtcagccaggctacagcggtctcaactgccagaccaacatcgatgactgc
tcccccaacccgtgtctgaacggcggttcctgtgtggatggagtgggaggattctcctgt
gactgccggccagggtttgatggggagcgctgtgaggcagagatggatgagtgtgccagt
caaccgtgccggaacggagccgtgtgccaggactacgtcaacagcttcgtctgcgagtgc
cggccaggcttcgacggaatcctatgtgaacacaacatcccagaatgcactgagagttcc
tgtctgaataacgggacctgtgttgacgacatcaacaccttctcgtgtcgttgtcgtcct
ggtttctacgggaccttctgtcagtatgagcagaatgagtgtgactctcagccctgtaag
aacggagggacctgtacagacggcctaggatcctaccgttgcacctgccctgtaggctac
aacgggcagaactgccagaactttgtgaacttgtgtagccagccactgtgcaggaacgga
gggtcctgttcccagtcacagaccacctggtcatgtcactgtcctgtgggctggactggt
ctgtactgtgacgtccccaacatgtcctgtcaggactatgctgctcggaatggtattcca
gtggagatggtgtgtaagcacatggggtgctgtgtgaacgtcggtaatgcccaccagtgt
cagtgccagcctggctacacaggcagctactgtgacaagactgtggacgagtgccagtcc
aacccctgccgcaacggagccacctgcatggactaccagggcacatatgagtgtatgtgc
aaggctggctaccagggggtgaactgtgagtatgacgtggatgagtgtcactctaaccct
tgtcgtcatggaggaacctgcatcaacctcatcaaccgcttctcctgcgcctgcccacct
ggtacacatggtgttcagtgtgaggtgaacatggacgactgtgctcccaagcctggctcc
tgggggcctcgctgtctgaacgggggccagtgtatggatggggtgggccgctacacctgc
tcctgcccccctggcttcgctggggagcactgtgagggggacgtcaatgagtgtctctct
ggaccctgtcactctcctggcagcctggactgtgtgcagctggtcaacgactaccagtgc
cgctgtcgcctaggctacacaggacgcctctgtgagtccatggtggatctgtgccagtct
aagccgtgccataacagtggcacctgttccatgaacatgagctcagtgcatggatactca
tgcacctgtcaaccaagtttcactggcttcaactgtggagaggtagagggctacaactgt
gcccagctgcgttgtcagaacggtgggcactgccaggattctcagggtggtcatctgcac
tgccgttgccagccaggcttcagtgggtcgcgctgcgagaccgtccacagctgccagaac
cggccctgtttgaatggaggcacctgtatgaaggacccacacaacccataccagtacagc
tgtcgctgcccagcccacttctcaggcaggcactgtgagaatgtcatcttcgaccagtcc
ccccgcaccccctcctgcccttatgtagagtgtgagcagcggtccggggataaggtgtgt
gacccgcagtgcaacaaccatgagtgccagtgggacggaggggactgttctctacattgg
cgccggccatgggtcaactgcaccgcctccgtgccctgctgggagctgttccgcaacggc
cgctgtgaccacgagtgtgacaactctggctgcctcttcgacagctttgagtgtcaagag
agcacaaagtcctactgcaagtatgatgactactgtgcggaccactatgccaacaagatc
tgtgacaagagctgtaacacagaggcatgtggctgggacggcctggactgctctgaggac
acccctgctaaggtggttgacggcacgctggtgatcgtagtgttactgcagcctgaggag
ctgctgggagacgtgagaggcttcctgcgctccctgggaaccctgctgcacaccaacctc
cgtgtcaagatggacgcccagcagaaactcatggtgtatccttactatggcctggagcac
gacaacgccattgaaggacagtctgctacaatgaaacgtagaggcaaacgggagctggac
aaggaggttatcgggtctaaggtttacctggagatcgataaccgagagtgtgctgagagc
tccatggactgtttctccagcacagagctggctgcatctttcatagctgcagagtacctg
aagtctgcgctgccctaccctgtggtctctgtcgacagtgaccatatggacccccagaag
ccccccttcatgctgtacctggctgtgggagcagctgtcatcatcctgctcatcctggtg
ctgggtgtgctggccgccaagaggaaacgcaaacacggcatcctctggctccccgatggc
ttcctggccaagaaagacgacaagaggagagagcccctgggccaggacgacttcggcatg
aagaacttcaagacccaggatggagggatgatggacggaggccagagatggatggaagag
gaggctccgcccaagaaaccaaggactgaggacaagcccctgctgccactgggtgtggat
ggaggagtggaccgacgggagtggactttacaacaccacaaggctgctgacatctctctc
actccaccacaggctgatctggaagcagactgccttgatgtcaatgtcaaaggaccagat
ggctttacccccctgatgctggcttctctacgaaacggaggggcgtctgattgcggcctg
caggcagaggaggaagaggagagtgggggagatgagccgggacccaacgtcatctcagac
ctcatcacccagggtgcaacactcatagcccagacagatcgcaccggtgagacggcactc
cacctggctgctcgctacgcccgggccgatgctgccaaaaggctgctggatgctggggca
gatgccaatgctcacgacaacatgggtcgcacacctctccacgctgctgtggcagccgat
gcccagggagtgttccagatcctgatccgtaaccgggccaccgagttggatgccaggatg
aacgatggcaccacacctctgatcctggctgccaggctggctgtggagggcatggtggag
gaactggtccactgccacgcggacatcaatgctgtcgacaaccacggtaagtctgccctg
cactgggcagctgctgtgaacaatgtggaggccaccctagtgctgctgaagaatggagcc
aacagagacatgcaggacaacaaggaggagaccccattgttcctggcagccagagagggt
agttttgaggcggcccaggttctgctggaccactactctaatagggacatcacagaccac
ctggaccggctgccccgtgacaccgcacaggagcgcatgcaccacgacattgtacgtctg
ctcgatcagtacaacctggtccacagccctcacaacggccccaaccacatgggcggggga
gtgggacactcccgggtctgtgggggcaacggagcgggctacatgggcatgcggcccggg
ccccagggcaagaagagcaggcggggaggggggaaggttggaggttcgggcgggggtaca
gccaaagagctgaaagacatgaaggctaagcggaggaagaagccaacaggaggagaaggg
cctgcagtgggagctgttggaggagccaatggcaacggcactaaagctgcaggagggctg
tcagagagctcagtcaccatgtctcctgtggactccctggagtctccacactcgtacaca
ggagatgctgccgtggcatccaacacggccaagtctcctcctctcctgagcagcccctcc
tctaggcccctgctgcctcccgtcagccacatgctgggccaacagcagagctggctgggt
ttgaagcatggatacggcggccacatgttcagcctcctcccccagcagatgggtaacggc
cattctggtatttcccagcaccacggccaaggcctgctcacccccatgaatgtcaccatg
agccgcgagcaactgcctcccatcgttaccttccagatgatggcaccggggggcgggcag
gcactgctgaagcagccccagcctgggcaggtgcagtcacaggggcaaaaccagtgccag
ccccgctctcagcagggccctactcacctgcactgcacccagggcatgatgtaccagatg
cccggcgtgggcctccagcacagcctgtcccacagcctcccccactctcacagcctggcc
cacagccacggcatggtgcatgacggccagtcccgccagcagctccctccatatcaggct
atccagagccccgtggataagtaccccacccctccctctcagcacagctacgccaccgct
ggctcggagggcaccaccccggggcacccggctcacccgcccagtgagcacccgtacctc
accccctcccccgagtcccctgacccctggtcctcctcctccccccactccaactcagac
tggtctgacgtcaccaccagccccacccccctggggaacccccatgcactgccgcctccc
cgccacacacatattccagagcagccgcagtcccagcagacacaacagaacccccagcag
catcagcatggcaacatgcaggtgtttgtataa
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integrated database retrieval system