Salvelinus sp. IW2-2015 (Arctic char): 111975755
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Entry
111975755 CDS
T05762
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111975755 (syde2)
Membrane trafficking [BR:
salp04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
111975755 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C2
Motif
Other DBs
NCBI-GeneID:
111975755
NCBI-ProteinID:
XP_023860086
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All DBs
Position
LG16:complement(33800799..33883633)
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AA seq
1822 aa
AA seq
DB search
MADPLRRNLLAKLRGKKSKKGTPAGGYGAATNGGRAGKGKVSQNPDGQTRPVVMFAEVHC
LTDNIMRGNDSYVNGIVVNKVGLDQEQSTVGVVETSEFPQQYEASANMHINTSRGPGDNQ
GSGCSGIRGRVNEELLGVSLQRATQYEGNDRDEMIRIHKQGPGYFSGQLQQGHIGRPHEQ
RKHFVPIPRQYSAGDSIGFGSNSPNNHIIYHRRPDGVVKMTNGHYPASKNNGTNVCFDKD
LKTRVSHGQPDDSCHQTVYNYKADNGQRSINDLKFTANVHPGHNQILKTNVTTNGTQMCP
PGIPXAHHPDSNYTEENIVIRNIESYGSSPEFTGDNIRVTHLQSPTFFPTELEICDVNVA
SHFICAREGTLRHYSLDSEDDDYYDNVILPFYVSESLGPNDRKSSDKIEAIESGKDVPKG
QVISDSAQETDRLRSQLKEAYYLLINTMHDISFDGQVSVNGFIDQASSSSHSRDSMCSRL
SIKHVDSDAWSSGEHSVQQVSDTDSILLCLLSENRGDPSLKNNFISKSLVNLSASRIGPP
LMRSTSDRAIKYRSGAHNAPCVQALGSQSPAVVGACENGDIASRPQAVGASDPFEKQASY
DGGTSSDDLLQDTGEDFKLNESSGSVNSLTGSSDKADTQQGGNSRRDGEMSAWDRGGSAK
PHGVTVNKMQEWMHKGRLLSSEMKQRIAGSMPQPHGTHGGLDSAARSSQGQASSVPGGSK
PAALTTRVHVAIPAAVVPCQSQALHQSALIENVHSSSSDRREVGEGKASELSLWRPPLNT
ITVSKKRNWLQQSSGRPHHTTQDDSQCILGAEEDNGHGHTPLPPPSPSPEYLKAPGPPPS
RPLRLHLPQVSMCHARVGPQPRCVDPAEENDADDEGEIWYNPIPEDEEPELPHIYRPTAI
PQVRLMVPTRPQELQAPQIQSRPSQEGGGGWTLEGCSPDLEVVGESLGGGDGGGEGSQQG
NAVHSMEPSVQLHRQMLLTCKPQEEGPSSSSRATAAAEGPDLATPGFSPPSSPNPAKKGS
SLNWSFPDKIKSPRTVRKLSMKMKKLPELSRKLSVKGIPSNNNNTSGNGASASSQSETRT
QCPKTNSGSEPGSAPPRLSPGGGQGAAASRNVISXYHLDSSVSTQQSYSKKKSSGTSMSA
SKGGYLSDGDSPELVAKSGKHRSSEGKGGKGKEKEKDPATGGGERTGAGGVTGGGGSSKL
HGTELDIDAFRHYAFTEQPKCTQYISGLMSLHFYGAEDLKPPRVDSRDVYCAIQVDSVNK
ARTALLTCRTTFLDMDHTFNIELENAQHLKLVVFSWDPTPKKNRVCCHGTVVLPALFRVT
RSHQLAVKLEPRGLIYVKLNLMEHWQNSLDGGYDGDRERQMFGVEAWRVVERENSGLMVP
LLIEKCITEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSLRVELCENTYPDINVITGV
LKDYLRELPYPLITKHLYEAVLDSMAKRPLRIGAGGCENDLVDTEHTVSLLENLPEVERL
TLRRLLDHLKLVASHHDVNKMTCQNLAVCFGPVLLSQRQEASCHSNRVFIDSEELASALH
FKKHIEVLHYLLQLWPVVDPHGKTSSPILEHPGPADQPAAPPLRRRKERPQVLNLSDAEM
AGVLRPRPGRLDSPSNRYAGDWSRCGERYLPPPLPQEENDYDDVPSEDMEVTEEGQEGQE
TEKEGXEELRQEGLLDSGQEEGQAEPPTAKQEPPLLQEVMEGPVEKEEEEREAEEERVEE
SDVSGGGQPSDDRVCDDDDDDDERILPLHNPKEHTYQAYMKIQDISPVLSNRVNLRDLQE
SIDTLIGNLERELNKNNLKVSY
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggaatttattagcaaaacttcgggggaagaaatctaagaaa
gggacgccggctggtggatacggcgctgcgactaatgggggcagagcaggtaaaggaaaa
gtttctcaaaacccagacggccaaactcgtccagtagtaatgttcgcagaggtgcattgt
ctgacagacaacatcatgagaggtaacgacagttacgttaacggcattgtagtaaacaag
gttggattagatcaagagcagagcacggtaggagttgttgagacgagtgagtttccccag
cagtacgaggcttcagctaacatgcacataaacactagccgggggccaggggacaatcag
ggtagcgggtgctccgggattaggggtcgagtaaatgaggaactcttgggggtctcactt
caaagagcaactcagtacgaggggaacgatagagacgagatgatcagaatccataaacaa
gggcccggctacttctctggacaattacaacaaggacacatagggagaccgcacgaacag
agaaaacactttgtccccattccgcgacagtatagcgcaggggattcaatagggtttggg
agcaatagtcctaataatcacattatataccacagaaggccagatggggtagttaaaatg
acaaatggccactatcctgcttcaaagaataatggaacaaatgtctgctttgacaaagat
ctaaagactcgagtaagccacgggcagccagacgactcctgccatcaaactgtgtacaac
tacaaggcagacaacgggcagaggtctataaatgatttaaagtttacggcaaacgtgcat
cctggccacaaccaaatattgaaaacaaatgttacaactaacgggacgcaaatgtgtccg
ccgggtatcccgtytgcgcatcatccggacagtaattacaccgaggaaaacattgtgatt
agaaacatagagagttacgggagctcgcctgaatttacaggggacaacattagggtgacc
catttgcagagcccgacatttttccccactgaattggagatatgcgacgttaacgtggcc
tcccatttcatatgcgcaagagaaggaacactccgacactactctctagatagcgaggat
gatgattattatgataatgtaattcttcccttttatgtatctgagtcattaggtccgaat
gatagaaaaagctctgataaaatagaagccatagagtcgggaaaagatgttccaaaaggg
caagtcatcagcgacagtgcgcaggagacagacagactacggagccagttgaaagaggcg
tattaccttcttataaacaccatgcatgatattagttttgatggtcaggtcagtgtraac
ggttttatagatcaggcaagttcctccagtcactctcgggacagcatgtgctcacggttg
tccatcaagcacgtggacagtgatgcttggtcgtcgggagagcacagtgtccaacaggtg
tctgacacagactccatcctgttgtgcctgctgagtgaaaaccgtggggatccaagtctc
aaaaataatttcattagcaagagcctcgtgaatctatctgctagcaggattgggcctccc
ttaatgcgttccactagtgacagagctatcaaataccgcagtggtgcgcacaatgcgccc
tgcgtccaggccctcggttcccaaagccctgctgttgttggggcctgtgagaatggggat
atagcaagtaggccacaggctgttggagcctctgacccgtttgagaaacaggccagctac
gatggtggcacgagcagcgacgacctgcttcaagacaccggtgaagacttcaagttgaac
gagagtagtggctcggtcaacagcctcactgggtcgtccgacaargcagacacccagcag
ggtggtaacagcaggcgagatggagagatgagcgcatgggaccggggaggctctgccaag
ccccatggagtcaccgtcaacaagatgcaggagtggatgcacaaaggccgtctgttgtct
tcggagatgaagcagcgcatcgcgggttccatgccccaaccccatggcacccacggtggc
ctggatagtgcagcacggtccagccagggccaggccagctcagttccaggtggatctaaa
ccagcagccctgacgaccagagttcacgtggccatacccgccgcggtggtcccatgccag
agccaggcattgcatcagtcagctctgatagagaatgtccactcctcctcctccgacagg
cgcgaggttggcgagggcaaggccagcgagctgtcactatggagacccccactcaacacc
atcaccgtttccaagaaacgcaactggctccagcagagctctgggaggccgcatcacacc
acccaggacgactcccagtgcattctgggagcagaggaggacaatggacatggacacaca
cccctaccccctcctagcccctccccggagtacctaaaagcccccggaccgccgccctct
cggcccctccgcctgcacctaccccaggtaagcatgtgccacgcccgcgttgggccccag
cccaggtgtgtggacccggccgaggagaatgatgcggatgacgagggggagatctggtac
aaccccatccctgaggatgaagaaccagagctgcctcacatttacagacccaccgccatc
ccccaggtcagactgatggtccctacacggccccaggagctccaagccccccagatccag
agcaggcccagccaggaaggggggggcgggtggaccctggaaggctgcagccctgacttg
gaggttgtgggggagagcctgggtggcggagatggaggtggagaggggagtcagcagggg
aatgctgtacattccatggagccgtcggtacagctgcacagacagatgctgctcacatgc
aaacctcaggaggaggggccatccagttccagcagagccacagctgcagcagaaggccct
gacctggccacacccggcttctcgcctccctccagccccaaccctgctaagaagggaagc
tccctcaactggtcattcccggacaagatcaagtccccgcgtaccgtcaggaaactctcc
atgaagatgaagaagcttccggaactcagccgcaagctcagcgtcaaagggatccctagc
aacaacaacaacaccagcggtaacggagccagcgcgagcagccaatcagagacaaggacc
cagtgtcccaaaaccaatagtgggtcagaaccaggctcagctcctcccaggttgtcccca
gggggcgggcagggggcggccgccagccgtaatgtgatctcgayatatcacttggacagc
agtgtgtcgacgcagcaaagttacagcaagaagaagagcagcgggacctccatgtcggct
agcaaggggggctacctragtgacggggactccccagaactggtggccaagtctgggaag
cacaggtcctcagagggcaagggaggcaaggggaaggagaaagagaaagacccagccact
ggaggaggagagagaacaggagcaggaggagtaacaggaggaggtggcagctccaagctg
cacggcacagaactagacattgacgcgttccgccactacgccttcacagaacagcccaag
tgcacccaatacatctcaggcctgatgagcctgcacttctacggcgctgaggacctcaag
ccgccacgtgtcgactcccgggacgtctactgcgccatccaggtggactcggtcaacaag
gcacgcactgccctgctcacctgccggaccaccttcctagacatggaccacaccttcaac
atcgagctggagaacgcccagcacctgaagctagtggtgttcagctgggaccccacaccc
aagaagaaccgtgtgtgctgtcatggcactgtggtgctaccggctctcttcagggtgacc
aggagtcatcagctggccgtgaagctggagccacgaggcctgatctacgtgaagctgaac
ctgatggagcattggcagaactccctggacggaggctacgatggggaccgggagcgacag
atgtttggggtggaggcctggagggtggtggagagggagaactcaggactcatggtgccc
ctgctcatcgagaagtgcatcacagagattgagaagagaggctgccaggttgtgggcctc
taccgtctgtgtggttcagcggcagtaaagaaggagcttcgggaggcctttgaaagggac
agcctgcgtgtggagctctgtgaaaacacctaccctgacatcaacgtcatcacaggtgtg
ctgaaggactacctgcgtgagttgccgtaccccctcatcactaagcacctgtatgaggct
gtgttagactccatggctaagagacctctgcgtattggagcaggaggatgtgagaacgac
ctggtggacacagaacacactgtcagcctgctggagaacctgccagaggtggagaggttg
accctgcggagactgctggaccacctgaagctggtggcgtcgcaccacgacgtcaacaag
atgacgtgtcagaacctggcagtgtgcttcggccccgtgctgctcagccaacgccaggag
gccagctgccatagcaaccgcgtcttcatcgactcagaagagctggccagtgccctgcac
tttaagaagcacatcgaggtgctgcactaccttctgcagctatggccagtggtggaccca
catggcaagacctcatcccccatcctggagcaccccggcccagccgaccagcctgccgct
ccacccctgcgtcggcggaaggagcgtccccaggtgctgaacttgagtgatgcagagatg
gctggggtgctgcgacctaggccgggccgactggacagccctagcaaccgttacgctggt
gactggagtcgctgtggagagcgctacctcccccctcctctgccccaggaggaaaatgac
tatgatgatgttccttctgaggatatggaggtcactgaggagggacaggaaggacaggag
acggagaaggaggggygagaggagctgagacaggaaggattactggacagtggacaggag
gaaggacaggcagagccacctacagcaaaacaggaacccccactactccaggaggtgatg
gagggacctgtagagaaggaggaagaggagagagaagcagaggaggagagagtggaggag
agcgatgtctccggtggcggtcagccgtcagacgatagggtgtgtgatgatgatgatgat
gatgatgagcgcatcctgcccctccacaaccccaaagagcacacataccaggcttacatg
aagatccaggacatcagccccgttctcagcaacagggtcaacctgcgagacctgcaggag
agcatcgacacactcataggcaacctggagagagagctcaacaagaacaatctcaaagtt
agctactga
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integrated database retrieval system
