Salvelinus sp. IW2-2015 (Arctic char): 111975857
Help
Entry
111975857 CDS
T05762
Name
(RefSeq) transcription factor HES-1-B
KO
K06054
hairy and enhancer of split 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03460
Fanconi anemia pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111975857
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111975857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111975857
03400 DNA repair and recombination proteins [BR:
salp03400
]
111975857
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
111975857
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
111975857
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_IRO3
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
111975857
NCBI-ProteinID:
XP_023860281
LinkDB
All DBs
Position
LG16:4979558..4981588
Genome browser
AA seq
278 aa
AA seq
DB search
MCGRDISDGQKMPADMMEKNSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRAR
INESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGK
YRAGFNECTNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQISAGPPHPS
FGQSMVQMPNSSPQGNVMPLPCKGGSPQSMSPEATKVYGGFQLVPASDGQFAFLIPNAAF
APNGPVIPVYANQVNTPVPAAVSPGAPTGNSDSVWRPW
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggaagggatatttcagacggacagaagatgcctgccgatatgatggaaaaaaac
tcatcctctccggttgctgctaccccagccagcatgaacacgacacccgataaacccaag
acggcttccgagcacaggaagtcatccaaacctatcatggagaaaaggagaagagccaga
atcaacgaaagcttgggacagttgaaaacacttatcctggacgcgctcaaaaaagatagc
tctagacactcaaaacttgaaaaggcagacatcctggagatgacggtgaaacatctccgg
aacctccagagagcgcaaatgactgctgctttgaacacggatcccaccgtgctggggaaa
tatagagcgggattcaacgagtgcacgaatgaagtcacccggttcctatccacctgcgag
ggggtaaacaccgaggtcagaacgcggcttctcggtcacttggccagttgcatgacgcag
atcaacgctatgaactaccccacacagcaccagatttcagccgggcctccccacccctcc
ttcggccagtccatggtacagatgcccaactcatctccgcaaggcaacgtgatgcccctg
ccttgtaaaggtggctctccccagagcatgtcaccagaagccactaaagtatacggcggt
ttccagctcgtacctgcctcagacggacaattcgccttcctcatccccaacgcagctttt
gcacccaacggtccggttatccccgtgtatgcgaaccaggtcaacacgcctgttccagcg
gcggtgtcccccggtgcaccgacaggcaactcggactcagtgtggcgaccctggtag
DBGET
integrated database retrieval system