Salvelinus sp. IW2-2015 (Arctic char): 111975869
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Entry
111975869 CDS
T05762
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111975869
Transcription factors [BR:
salp03000
]
Eukaryotic type
Other basic domains
RF-X
111975869
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
NTS_2
Motif
Other DBs
NCBI-GeneID:
111975869
NCBI-ProteinID:
XP_023860297
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All DBs
Position
LG16:complement(17285580..17367002)
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AA seq
744 aa
AA seq
DB search
MQSSEGGSDSSSSVALRTSTSAQAPVVQPVPASQQRVLVQATGSAQKGAQVQQLSVPRVQ
QVPQQHDTLVPLPPTDSTVVQQIHHVYPSQVQYVGEGGEAVYTNGTIRTAYSYNPEAQLY
GQGSGGAYFDSQGGGSQVTTVVSSASGVPPHGMVGIAMDVGGSQIISGGSTYLIHGGGME
GGRHHASHSSRSSSAMLEMAIENLQKSEGIATHKSSLLNSHLQWLLDNYETAEGVSLPRS
SLYNHYLRHCQEQKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPL
NRLQEDSQYMAMRQQPVHQKQRFKPLQKVDGMGDSLSGGSQHSASTPEQSVAAQSQHHQQ
YIDVSHVLPPFPIPDLGTQPLPERINMNDVKKLQNLYRDHCEATLDVVMNLQFHYIEKLW
QTFWFSTAPSSDGTTTIPNSDEDMEGVIPRQKLIALCKYEPVKLWMRSCDHILYQALVEI
LIPDVLRPVPSTLTQAIRNFAKSLEGWLTTAMSDFPNEIVRTKAAVVSAFAQTLRRYTSL
NHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDESVVQRLEQDFKVTLQQ
QSSLDQWAAWLDNVVNQVLKPHEGSPSFPRAARQFLLKWSFYSSMVIRDLTLRSAASFGS
FHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFSDLNSMMLMDKDPSFSDDMSDIGSD
EGRGPNEPAVKRERIEINHSLQEI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcagagggagggtccgattcgtcgtccagtgtggcgctgcgtacgtccacc
tccgcccaggcccccgtggtgcagcctgtcccagcctcacaacagagggtgctggttcag
gccacaggctcagcccagaaaggagcgcaggtgcagcagctgtcagtcccccgggtgcaa
caggtccctcagcagcatgacactttagtcccactgccacctactgacagcactgtggtc
cagcagatccatcatgtctacccctcccaggttcaatatgtgggagaggggggagaagca
gtttacactaatggaaccatccggacagcctactcctataaccctgaggcccagctgtat
ggccagggcagtggaggagcctattttgactctcagggcgggggttcccaggtcacgacg
gtggtctcctccgccagcggtgtgccgccccacggcatggtgggcatcgccatggatgtg
ggcggcagtcagatcatctcaggtggcagcacctacctgatccacggcgggggcatggag
ggaggccgccaccacgcctcacactcctcccgctcctcctccgccatgcttgaaatggcg
attgaaaacctccaaaagtcggaagggattgcaactcacaaaagcagcctgctcaacagc
catctgcagtggctgctggataactatgagacagcagagggggtgagcctgccccgaagc
tccctctacaaccactacctgcgccactgtcaggagcagaaactggacccggtcaacgct
gcctcctttgggaaactcatccgctccgtcttcatgggcctcaggacccgccgcctcggc
acaaggggcaactccaaataccactactatggcattagactgaagccagactccccactc
aacagactgcaagaggactctcagtacatggccatgagacagcagcctgtgcaccagaaa
caaaggttcaagcccctccagaaggtggatggcatgggggacagcctgtcaggaggctcc
cagcattcagccagcaccccagagcagtctgtggcagcccagagccagcaccaccagcag
tacattgatgtgtcccatgtcctgcccccgttccccatccctgacctgggcacccagccc
ctccccgaacgcatcaacatgaacgacgtgaagaagttgcagaacctgtacagggatcac
tgtgaggctactctggacgtggtcatgaacctccagttccactacattgagaaactgtgg
cagaccttctggttttcaacagcgccatctagtgacggaaccaccaccatccccaacagt
gatgaggacatggagggggtgatccccaggcagaagctgattgctctgtgcaagtatgag
cctgtcaagctgtggatgaggagctgtgaccacatcttgtaccaggccttggtggagatc
ctcatccctgacgtgctgcgccctgtccccagcactctcactcaggccatccgcaacttc
gccaagagtctggagggctggctgaccacagctatgagcgactttcccaatgagattgtc
cgcaccaaggcagcggtggtgagtgcatttgcccagaccctgcgtcggtacacctctctg
aaccacctggcccaggcggcccgcgccgtgctgcagaacacctctcagattaaccagatg
ctcagcgacctcaatcgtgtcgacttcgccaacgtacaggagcaggcgtcgtgggtgtgt
cagtgtgatgagagcgtggtccagcggctggagcaggacttcaaggtgaccctgcagcag
cagagctctctggaccagtgggccgcctggcttgacaacgtggtcaaccaggtccttaag
ccccacgaaggtagccccagctttcccagggccgcacgacagttcctgctcaagtggtcc
ttctacagctccatggtgatcagggacctgaccctgcgtagtgctgctagtttcggctcc
ttccacctcatcagactgctctacgatgagtacatgttctacctggtggagcaccgcgtc
gcccaggcaaccggagagacgcccatcgctgtcatgggagagttcagtgaccttaactcg
atgatgctcatggacaaagacccatccttctcagatgacatgagtgacataggcagtgac
gagggccgagggcccaacgagccggccgtgaaaagagagaggatcgaaatcaaccactcg
ctgcaggaaatctga
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