Salvelinus sp. IW2-2015 (Arctic char): 111975903
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Entry
111975903 CDS
T05762
Name
(RefSeq) uncharacterized protein LOC111975903
KO
K06260
platelet glycoprotein V
K28877
leucine-rich repeat-containing protein 15
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111975903
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111975903
04090 CD molecules [BR:
salp04090
]
111975903
Transporters [BR:
salp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
111975903
CD molecules [BR:
salp04090
]
Proteins
111975903
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_LRWD1
PRIMA1
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
111975903
NCBI-ProteinID:
XP_023860352
LinkDB
All DBs
Position
LG16:complement(5095196..5099032)
Genome browser
AA seq
1261 aa
AA seq
DB search
MWSVLLFLLVQPLLTDSMVCPSSCMCNLHGAVKCVGNIRDVPKGMPTNMYLLQLNGTNMK
VLNEQSLAMLPLMLRLGISHSPLDTIHPEAFHVAPQLLSIKLSSNALSSLPSRVFSPLVS
LEQLHLDDNRLESIAPVLFEGLANLNELDVSNNAIARLAANVFHGLSSLRYLNLGRNSLQ
QLPPTLFHSLTRLQFLMLYNNKLERLEVGALDELANLLELKLHNNQIAHIPPEVFWALGN
LMXLTMSSNQLQGVPNESFYHLPKLTKLTIYKNPLLSLPDKLMGQMPGMKEFYLYTTNLS
TVPWSLFANMSGMERLSLHLNNKLRELPPDLFCCLPNLQKLSLKSNDIQDLHPDIFSNLA
NMNTLLLNDNKLRSLSEDIFKGNPSLASIELKNNQLRTLPGEVFSTAGGLRVVTLSGNPW
DCRCGIRDIASWIKLNEGMVSDRTDVICRNPHPLLLRPLGSLLDEEFKCDVTTRSSSSTT
RSSSSTTRSSIELIHAVSTTALEEQEFTPTTTAPEAPSTQQTENPTESVRFTTPGSRRTT
AATPTTDVGDILDDDYIFKPMGTESLPVHVLSPPFHDRLVFENGLEFVHNIRLKGWVYLW
TLPPNGAYVGFLMALHILLVATGVALILAAMYGMYRLHQATEDLGAILTNRKHTIISERK
QKDPDELGRSFEQQDQIMILSGGEDRXSMDLPIDLLIFLLLLAISGVLGVCPDGCQCKDN
KILCHGRSITEFPSSVPGSTTTFYISNTNITALKPDDLAGFAEALGIFVVKDTGIREVFP
GTFDLTHNLGALGFTGTDLNDLPEALFLNLVKLESLTLSGNKLLVLRPAWLYSLAALRTL
DFSKNLITSVPEKAFRSVTQLEHLTLARNGINQLYRDTFRGLSKIKSLRLNRNALRAIPA
GAFDDLVSLEELSLQDNAITHLPANLFSQLQRLKKLYLSSNRLTSLPEGILLNLPNLAQI
SLYENELQSLSPGVFGPMAVRELWLYDNRLTHLEDHTFSNLTQLRLLVLSRNQISSVSPG
AFSGLAELGEVSLHTNLLTSLQEGTFQGLHKLVNISLEHNYIYSLPARLLQGHSHLGQLD
LHNNSLLNLPSELLSTLTVANEVLLAENPWKCDQDIVPLRDWLTQNPTKTNLSTVVCLTP
SVLSGDSIAELTDEELTLSTPTAVPDITPTEKRRKPHTPAPKRSTPSPAAEATPTPTQEQ
GEDTSSGQGNGEGVSRNTQIIIIAVVCTAIITSLIVCCVCWRRNNRGSRNLGRRNKNNSV
I
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcgtattactctttctcctggtccagcctttgctcaccgacagcatggtctgc
cctagcagctgcatgtgcaacctacatggggccgtcaaatgtgtgggcaacatcagggac
gtgcccaaaggcatgcccaccaacatgtacctacttcagctgaatggcaccaacatgaag
gttctgaacgaacagagtctggccatgttgccccttatgctgcgtttaggcatcagccac
agccccctggacaccatccaccctgaggccttccatgtggccccgcagctcctctccatc
aagctgtcatccaacgccctctccagcctcccttcccgggtgttcagccccttggtcagc
ctggagcagctgcatctggatgacaatcgtctggagtccatcgctcccgtgttgtttgag
ggtctggccaacctgaacgaactggacgtcagtaacaacgccatcgctcgcctcgccgcc
aatgttttccacggactgagtagcctgcgctatctcaacctggggagaaactccctgcag
cagctgccccccaccttgttccactcattgacgcggttgcagttcctcatgctctacaac
aacaagctagagcggctggaggtaggcgccttrgatgagctggccaacctcctggagctc
aaactgcacaacaaccagatcgcccacatcccccccgaggtgttttgggccctaggcaac
ctcatgarcctcaccatgtcctccaaccagctccagggcgtcccgaatgaaagcttctac
caccttcccaaactcaccaaactcaccatctacaaaaaccctctgctgtcactgccwgat
aagttgatgggccaaatgcccgggatgaaggaattctacctgtataccaccaacctcagc
accgtgccctggagcctgtttgccaacatgagcgggatggagaggctctccctgcacctc
aacaacaagctgagggagctgccccctgacctwttttgctgcctgcccaacctccagaag
ctttccctcaagtccaacgacatccaggatctacatccagatattttctccaacctggcc
aatatgaacactctgctcctgaatgacaacaagcttcgctccctttctgaggacatattt
aagggcaaccccagtttggccagcatcgagctgaagaacaaccagctgcggacccttccg
ggggaggtcttctctactgcagggggtttaagggttgttactctgagtggcaacccatgg
gactgcaggtgtggcatcagagacattgcaagttggataaagcttaatgaaggcatggtt
agtgatcggacggatgtgatatgtcgtaatccgcaccctctacttctccgcccacttggt
tccctactcgacgaagagtttaagtgtgacgttaccacacgctcgagcagcagcaccacc
cgctcgagcagcagcaccacccgctcttcgattgaactcatccatgccgtttccactaca
gctcttgaggagcaagaattcacacccacaactactgcacccgaggctccatcaacccaa
caaacagaaaatcctactgagagtgtcaggttcaccacacctgggtcgaggcgcacaaca
gctgctacaccgaccaccgacgttggcgacattcttgacgacgactatatattcaagcct
atgggcactgaatcgctccccgtccatgtcctatccccgccctttcatgacaggctggtg
tttgagaacgggctcgagtttgtgcacaacatccgcctaaagggctgggtttacctgtgg
acgctgccacccaatggggcttacgttgggttcctcatggctctccatatccttctagtg
gccacaggcgtggccctgattctggctgccatgtacgggatgtaccgtctccaccaggcc
acggaagacctaggagcaatactcacaaacaggaaacacaccatcatatcagagaggaag
cagaaagacccagatgaacttggtagaagctttgaacaacaggaccaaataatgatcctc
tcagggggagaggacagaycatcaatggacctgccaatcgacctcctcatctttctcctc
ctccttgccatcagtggagttcttggagtgtgcccagatggatgccagtgcaaagacaac
aaaatcctttgccatggcaggtcaatcacagagtttccctcctcagtgcccggttccact
accaccttctacatctccaacaccaacatcaccgctctcaaacctgatgacttggctggt
tttgccgaggcccttggcatctttgtggtcaaagacactgggatcagagaagtattccct
ggcacctttgacctcacccataacttgggtgccctgggcttcacaggcactgatctgaat
gacctgcctgaggccctgtttctgaatctggtgaagctggaatctctgactctgagcggc
aacaagctcctggtgcttcgccccgcctggctttactccctcgctgctctgaggaccctg
gacttcagcaagaacctcatcacgtctgtaccagagaaggcctttcgctctgtcactcag
ctggagcatctcaccctggccaggaacggcatcaaccaactctacagggacaccttcagg
ggcctgagcaagatcaaatccctgcgtctgaaccggaacgctcttagggcgatccctgct
ggagcgtttgatgacctggtaagcctggaggagctctctctgcaggataatgccatcact
catctccccgctaacctgttctcccagctgcagaggctaaagaagctttatctctccagc
aaccggctaacttccctcccagaggggattctcctcaacctccctaacctggcccagatc
tccctgtatgagaacgagctccagagtttgtccccaggagtgttcggccccatggccgtg
agggagctgtggctgtatgacaaccggctgacccacctggaggaccacaccttcagcaac
ctgacccagctgcgtctgctggtactgagccggaaccagatcagctctgtgtctcccggg
gccttcagtgggctggcagagctgggggaagtgtccctacacaccaacctcctcaccagc
ctgcaggaaggcaccttccaggggctgcataagctggtaaacatctccctggagcacaat
tacatctactcccttcctgccaggcttctccagggccactcccaccttggccagctggac
ctccacaacaactccctcctcaacctgccctcagagctcctcagcaccctcacggtggcc
aatgaggtgctgctcgctgagaatccctggaagtgtgaccaggacatcgtgccactgcgg
gactggctgacacagaaccccaccaagactaacctcagtactgtggtgtgcctcacgccc
tctgtcttaagcggtgacagcatagccgaactgactgacgaggagctgacgttgtccact
ccgaccgccgtccctgacatcaccccgacagagaagaggaggaagccccacaccccggct
cccaagaggagcaccccctcccctgctgcagaggccacgcccacgcccacccaggagcag
ggggaggacaccagcagtgggcaggggaacggagagggtgtgtccaggaacacgcagatc
attatcatcgcggtggtctgcaccgccatcatcaccagtctcattgtctgctgcgtctgc
tggaggaggaacaacagaggcagccgcaaccttggccgcaggaacaaaaacaactcggtc
atctag
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