Salvelinus sp. IW2-2015 (Arctic char): 111975906
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Entry
111975906 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111975906
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111975906
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111975906
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
Pox_A_type_inc
zf-RING_UBOX
Endonuclease_7
zf-ANAPC11
zf-Nse
Motif
Other DBs
NCBI-GeneID:
111975906
NCBI-ProteinID:
XP_023860355
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All DBs
Position
LG16:complement(5544789..5550956)
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AA seq
480 aa
AA seq
DB search
MDLHRPSFKMDSSSYLPSPLASPALMVLASTAEAGNDSSIPCQAPRPFGVPISEKDLHLP
FPSGSYTFASMYHRQGPVSSHGTFPTRDFPASLLHLHPQFHPPNLDCSSLGMLNHSGVGA
FRPFSSPPEEREVRGYQSAFTPAKRLKGCYTDSERKQYEFGGGRILSGSPWSLKAAEDSG
RKLFAVSGLLSDSEALSSPEDRKEGCGQGGEVAGPPSRLKWCRDTTFLRVRTNRHTRLNV
RIGKLKRRKADEVQDILVDLGGEGVQWRERRRLQMTSMLGGFKGSVFVSSSTSNEGRGDS
DADLDVDGDDTADYGRAQYTEADIIPCSQREPGEVEERKALRGAVLNVGTLSNRVTLEHS
KWTNEGCPSTSNGERNKLDNSIISLHRTCKNSDIETVSEDSALTTLDALKTRIRDLEKQM
SRGDRYKCLICMDTYTTPLSSIQCWHVHCEECWLRTLGAKKLCPQCNTITSPGDLRRVYL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaccggccctcctttaagatggacagctcctcctacctgcccagtcccctg
gcctccccagccctgatggtgctggcctccacagccgaggctggcaacgattcctccatc
ccttgccaggccccacggccttttggggtccccatctccgagaaggacctccacctcccc
ttcccctccggctcctacacatttgcctccatgtaccaccgccaggggcccgtctccagc
catggcaccttccccaccagagacttccctgcctccctgctccacctccacccccagttc
cacccccccaacctggactgctcatctctagggatgctgaaccacagcggggtaggggcc
ttcagacccttctcctccccgcctgaggaaagggaggtcaggggttatcagtcagccttc
acccctgctaagaggctcaagggctgctataccgactcggaaaggaagcagtatgagttt
ggaggagggcgtattctctctggttcgccgtggtcgctcaaagccgctgaggattctggg
aggaagttgtttgcggtgtctggcctgctgtcagacagtgaggccttgtctagtcctgag
gaccgtaaggaaggctgtgggcaggggggcgaggtggcgggtcccccctcacgtttaaaa
tggtgcagagataccacgtttcttcgtgtgaggaccaacagacatacaagactgaatgtc
aggatcggcaagctgaagaggaggaaagctgacgaagttcaggacattttggtggacctg
ggaggagagggggtgcagtggagggagcggaggaggttacagatgacatccatgctgggg
gggtttaaagggtcggtatttgtgagcagcagcacatctaatgagggccgcggtgacagt
gatgctgacctggacgttgatggagacgacaccgcggactacggaagagcacaatataca
gaggcagacatcatcccctgttcacaacgggagcctggggaggtggaggagaggaaagca
ctgaggggggctgttttaaatgttggaactctgtccaacagagtaactctggaacattcs
aaatggacaaatgagggatgtccatccaccagcaacggagaacgcaacaaactggacaac
agcataatctccctacacaggacctgtaaaaacagtgacatcgagacggtctctgaggat
tcggcactcacgacactcgatgcactaaaaactcggatacgagacctagagaagcagatg
tccagaggagacagatacaaatgtctcatctgtatggacacatatactacgcccctcagc
tccatccagtgctggcacgtccactgtgaggagtgctggctccgcacactgggggctaag
aagctttgtccacagtgtaacaccataacttcacctggggacctgcgacgggtgtatctg
taa
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