Salvelinus sp. IW2-2015 (Arctic char): 111975929
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Entry
111975929 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: fibrillin-2-like
KO
K23342
fibrillin 2/3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111975929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111975929
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111975929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
TB
EGF
hEGF
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
111975929
NCBI-ProteinID:
XP_023860368
LinkDB
All DBs
Position
LG16:12026884..12126194
Genome browser
AA seq
2838 aa
AA seq
DB search
MGAGKLARLLLGWAAVCWAAVHTAYGQAGAGDGGYQASRFTGKVDEREVQRVRRRGQETL
RGPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGA
GAGAGMQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVY
GFTGPQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHP
CRRGFIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCEDID
ECSTNPGVCDGGECTNTAGSYVCTCPRGYITSTDGARCVDQRVGTCFSALASGRCAGDLQ
GQYTKMQCCCDTGRCWASGQIPEMCPVRGSDEYRRLCIDGVPHGTGNGGFPHGVFPNGGG
SNGNGYSYGYKLNPNGPNGNGHHGNGGGIGGGGQGGGGGGGNGFGGNGGGRNIVSLNETV
DVCKHFTNLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTPGS
YHCKCHEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTGGSFQCICNAGFELTPDGKNC
IDHDECATTNMCLNGMCINEDGSFKCICKPGFALAPNGRYCTDIDECQTPGICMNGRCIN
SEGSFRCECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCASPEH
GFGEPCLPCPARNSAEFQAVCSSGIGITADGRDINECALDPEICQNGMCENLRGSYRCXC
NIGYESDSSGKNCVDINECLVNRLLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDINE
CDSSPCVNGICRNIAGSFNCECSHGSKLDSTNTICVDSMKGTCWLNIQDGRCEVNINGAT
LKSECCSTLGAAWGSPCERCEIDTACSRGFARMKGVNCEDINECEVFPGVCTNGRCVNTQ
GSFICECAEGLTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRVDMCCCSVGAAWGI
DCEECPKAGTPEYKSICPRGPGFANRGDILTGRPFYKDVNECKVFSGLCSHGTCRNTIGS
FKCRCSSGFALNMEERNCTDIDECRISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKN
CMDIDECERNTLLCQGGACLNTEGSYECECPPGHQLSPDGSSCEDVNECQLSNNLCKNGH
XVNMVGNYQCSCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALM
PDLRTCADIDECEDSPDICDGGQCTNVPGEYRCLCYDGFMASMDMRTCIDVNECELNPNI
CFMGLXEHQGILSSCHCQLGYFVKKGSTGCTASSTDRMREALTFMSLHFLNADCVNTPGS
YRCACKEGFNGDGFSCSDMDECADNVNLCENGQCLNAPGGYRCECEMGFTPTEDSKACQD
IDECNFQNICVFGTCQNLPGMFRCVCDDGYELDRSGGNCTDINECADPVNCINGLCVNTP
GSYLCNCPPDFELNPTGVGCVDTRVGNCFLDTLARGDGGISCSAEIGVGVTRASCCCSLG
GAWGNPCELCPPINSTEYKTLCPGGEGFRPNPITVILEDIDECQELPGLCQGGNCVNTFG
SFQCECPAGYYLNEETRICEDIDECTAHIGICGPGTCYNTLGNYTCVCPPEYMQVNGGNN
CMDMRKSVCYRNFNDTCENELSFNMTKKMCCCAYNVGKAWNKPCEACPTPVTSEYQLLCG
NQAPGFIIDIHTGKPIDIDECREIPGICANGVCINQIGSFRCECPMGPSSYXQYTAICED
IDECKQRDNLCQRNANCINIPGSYRCECSPGFKLXPSGACVDRNECQEIPNVCSHGECXD
TQGSYRCLCHNGFKATADQTMCMDIDECDRQPCGNGTCKNTVGSYNCLCFPGFELTHNND
CMDIDECSALVGQVCRNGQCINSLGSFQCLCQDGYELTPDGKNCVDINECVSLPGTCSPG
TCQNLDGSFRCICPSGYEVQNDQCIDINECEVEPNICQFGTCTNTPGSFQCICQKGFVLS
DNGRRCLDTRESFCFTRFESGKCSVPKAFNTTKAKCCCSKMPGEGWGDPCELCPRESEAS
FKSLCPYGHGSLPGLGDAREDMNECLDNPASCVNGVCINTDGSFRCECPLGYNLDTQRGQ
CALXGCTSILRSHSCSLPPSLSPDINECSLNPLLCAFRCVNTFGSYECMCPSGYVLRDDH
RMCRDQDECSEGLDDCESKGMSCKNLIGTFMCICPLGMQRRPDGEGCMDLNECRAKPGIC
KNGRCENTVGSYRCVCNEGFQPSSTGTDCIDNRQGFCFTEVLQTMCQRGSTNRNSVTKSE
CCCNLGRGWGPQCELCPLPGTVQYKRMCPLGPGYTTDGRDINECTVMPDLCKKGQCINTI
GSFRCHCNVGYTTDFTGTSCIDMDECSASPKPCNFLCKNTEGSYLCSCPRGYTMQPDGKT
CKDLDECSTKQHNCQFLCVNTIGGFTCKCPAGFTQHQTACIDNNECNGQNSVCGSRASCV
NTPGSFNCDCGKGFSLDTTGLECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQW
NQCVDENECSGASVCGSASCYNTLGSFKCLCPSGFDFEQGGGGCQDVNECSMGSNPCSFG
CSNTDGGYLCGCPGGYYRAGQGHCITGQGFQDQYSSEGDDEDSLSPEACYECKINGDVGK
KGRHRRHAAGDNDLKEVSMASVDTQESIPMNLSLASLHNKEPLLELLPALEPLEHHVRYV
ITHGNQGEHFRLLERRDGKSVLRLGRKSPPPGSYRLEIASLPLFGPRRLRQLEEEHDSDY
LLGEIGDALRIKLHIHLH
NT seq
8517 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagggaagctggcccggttgctgctgggatgggcggccgtttgctgggccgcg
gtccacacagcgtatggccaggcaggagcgggagacggagggtaccaagccagccgcttc
acggggaaggtggacgagagggaggtgcagagggttcgccggagaggccaggagacactc
agagggcccaatgtgtgtggctctcgcttccactcctactgttgccctggctggaagact
ctgcctggagggaaccagtgtattgtcccgatctgccgtaactcgtgcggtgatggcttc
tgttccagacccaacatgtgcacctgcggcagtggccagctctcccccagttgtggggcc
ggagccggagccggaatgcagagctgtaacgtcaggtgtatgaacggaggcagctgccaa
gaggactcctgctcctgtcagaaaggctacaccggcaaccactgtggacagcctgtgtgt
gagaatggttgccagaacggagggcgctgcattgggcccaacagatgtgcctgtgtctac
ggcttcactggcccgcagtgcgagagagactaccggaccgggccctgcttcacgcaggtc
aacaaccagatgtgccagggccagctgagtggcatcgtgtgcaccaagacattgtgctgt
gccaccatcggacgggcatggggacacccctgtgagatgtgccccgcccagcctcacccc
tgtcgccgaggcttcatccccaacatccgcagtggcgcgtgccaggatgtggatgagtgt
caggccatcccggggctgtgtgcaggaggtaattgcatcaacacagtgggctcctatgag
tgtaaatgtcctgcgggccaccgccagagtgacaccagccacaagtgtgaagatattgac
gagtgcagcactaacccaggtgtttgtgacggaggtgaatgcactaacacagccggcagc
tacgtctgcacctgtccccgtggttacatcaccagcactgacggtgccagatgtgtagac
cagcgtgtgggcacgtgtttctcagcgttagcgagtgggcgctgcgcaggtgacctgcag
ggccagtataccaagatgcagtgctgctgtgacacgggccgctgctgggcttctggacag
atccctgagatgtgccctgtcagagggtccgatgagtacagaaggctgtgcatcgatggg
gttccccatggcacaggtaacggaggtttcccccacggagtcttccccaatggtggtggc
agcaacgggaacggttacagctacggctacaagctcaacccaaacggacctaatggcaat
ggtcaccatggcaacggaggaggaattggaggagggggacagggaggaggaggaggagga
ggaaatggtttcggaggaaacggtggggggcgtaatatcgtatcactcaatgagaccgtt
gatgtgtgtaaacatttcaccaacctgtgtttgaacggacgctgtatccccaccccgacc
agctaccgctgtgaatgtaacatgggctacagacaggacgtacgaggggagtgtatcgat
gtggatgagtgcgtcagcaacccctgtgtcaatggagactgtgtcaacacacctgggtcg
taccactgcaagtgtcacgaaggctaccagggcacccccaccaaacaggcctgcattgat
attgacgagtgcatcgtgaacggagtgatgtgtcgtaacggacgttgtgtcaacactggc
ggaagcttccagtgcatctgcaacgctggctttgaactcactcctgatggaaagaactgc
atagatcatgatgagtgtgccaccaccaacatgtgtctcaatggaatgtgtatcaatgag
gatggtagcttcaagtgtatctgtaaacctggctttgccctggcacctaacggacgctac
tgcacagacattgatgagtgccagaccccaggcatctgtatgaacggacgttgtatcaac
tctgagggctccttccgctgtgagtgcccaccgggcctggccatcgacgtggacgggaga
gtgtgtgtggacacacacatgcgcaccacctgctacggcgccatcaagatgggcacgtgc
tcgcggcccttccctggcgccgtcaccaagtctgagtgctgctgtgccagtcctgaacac
ggcttcggagagccctgcctgccctgccctgcccgcaactcagctgagttccaggccgtg
tgcagcagtgggattggcatcaccgctgacggcagagacatcaacgagtgtgccttggac
cctgaratttgtcagaacggcatgtgtgagaacctgagagggagctaccgctgcwtctgt
aacatcggttacgagtccgactccagcggaaagaactgcgtggacatcaacgagtgtctt
gtgaaccgtctgctgtgtgacaacggcctgtgtagaaacacccctggcagctacacctgc
tcctgtcccaaaggcttcgtcttcaaaccagactctgagacctgcgaagatatcaacgag
tgtgactccagcccgtgtgtcaatggaatctgccggaacatcgccgggtccttcaactgc
gagtgttcccacggcagcaagctggactccaccaacaccatctgcgtggacagcatgaag
ggaacgtgctggctgaacatccaagatggccgctgtgaggtcaacatcaacggcgccacg
ctcaagtctgagtgctgctctacgctgggagccgcctggggcagtccttgtgaacgctgc
gagatcgacactgcctgttccagagggttcgctcgtatgaagggagtcaactgtgaagac
atcaatgagtgtgaggtgttcccgggggtgtgtaccaacgggcgctgtgtcaacacccag
ggctccttcatctgtgagtgtgctgagggtctcaccctggacgggagtggacgcacctgc
gtggatgtgcgcagcgagcagtgctacatgaagtggcatgaggatgagtgtggcgagccg
ctgcccgggcgctaccgcgtggacatgtgctgctgctcggtgggcgcggcctggggcatc
gactgtgaggagtgtcccaaggcgggaaccccggagtacaagtccatctgcccccgagga
ccaggcttcgccaaccgaggagacatcctgactggcagacccttttacaaagatgtgaat
gagtgtaaggtgttcagcggcctgtgttctcacggaacgtgtcgcaacaccatcggcagc
ttcaaatgtcgctgcagcagcggcttcgccctcaacatggaggagaggaactgcaccgat
attgacgaatgtcgtatctctccggacctgtgtggccacggcacctgtgtgaacaccccc
ggcagcttcgagtgtgaatgcttcgagggctatgagagcggcttcatgatgatgaagaac
tgcatggatattgatgagtgtgagaggaacacactgctgtgtcaaggaggcgcctgtctg
aacacagaggggagttacgagtgtgaatgtccccccggacaccagctgagccccgacggt
tcctcctgcgaagatgtgaacgagtgccagctgagtaacaacctgtgtaagaacggccac
tgrgtcaacatggtggggaactaccagtgctcctgtgacacgggctaccaggttacacca
gacagacagggctgtgtggatattgatgagtgtaccatcatgaacggcggctgtgacaca
cactgtaccaactcagagggcagctacgagtgcagctgtagtgagggctacgctctcatg
cccgacctcagaacctgcgctgacatcgatgagtgcgaggacagccctgatatctgtgac
gggggccagtgtaccaacgtccccggagagtaccgctgtctctgctacgacggattcatg
gcctccatggatatgaggacctgcattgatgtgaacgagtgtgagctgaaccctaacatc
tgcttcatgggactgtgagaacaccaagggatcctttcatcctgtcactgtcagctggga
tactttgtcaagaagggctccaccggctgcacagccagcagtacagacagaatgagagag
gcactcacatttatgtctctacattttctcaacgcagactgtgtcaacacccccggctcc
taccgctgtgcctgcaaggagggcttcaacggggacggcttctcctgttctgatatggat
gagtgtgctgacaacgtgaacctgtgtgagaacggccagtgtttgaacgctccgggcggc
taccgctgcgagtgtgagatgggcttcacccctactgaggacagcaaggcctgccaggat
atcgacgaatgtaacttccagaacatctgtgtgtttggaacgtgtcagaacctcccgggg
atgttccggtgtgtgtgtgacgacggctacgagctggaccgcagcggaggaaactgcact
gacattaacgagtgtgcggaccctgtgaactgcatcaacggcttgtgtgtgaacacacca
ggaagctacctgtgtaactgccctccggacttcgagctcaatccaactggagtgggctgt
gtggacacacgagtgggcaactgtttcctggacacgttggcgcgtggcgacggtggcatc
tcctgcagcgctgagatcggcgtgggcgtcacccgcgcctcctgctgctgctccctggga
ggagcctggggaaacccctgtgagctctgcccacccatcaactccacggagtacaagaca
ctgtgtcccggaggagagggcttcagacctaaccccatcactgtcatcctggaagacatt
gatgagtgccaggagctgccaggcctgtgccagggtggcaactgtgtcaacaccttcggt
agcttccagtgcgagtgccccgcaggctactacctcaacgaggagacacgcatctgcgag
gatattgatgagtgcacagcacacattggaatctgtggtcctggtacctgctacaacacc
ttggggaactacacctgcgtgtgtcctcctgagtacatgcaggtcaacggaggaaacaac
tgcatggacatgaggaagagcgtgtgttaccgcaacttcaacgacacgtgtgagaacgag
ctgtcgttcaacatgaccaagaagatgtgctgctgtgcctacaacgtgggcaaagcctgg
aacaagccctgtgaagcctgccctacccctgtcacctcggagtaccagttactgtgtggg
aaccaggctcctgggtttatcatagacatccacacgggcaagcccatcgatattgatgag
tgtcgagagatcccggggatatgtgcaaacggagtgtgtatcaaccagataggaagcttc
cgctgtgaatgtccaatggggccttcaagctactaacaatatactgctatctgtgaagat
attgacgagtgtaaacagcgagacaacctgtgccaacgaaacgccaactgtatcaacatc
ccagggagctaccgctgcgagtgctcaccaggcttcaagctgntcccaagtggggcctgc
gtggaccgcaacgagtgccaggagatccctaacgtgtgtagccacggagagtgtatrgat
acccagggcagctaccgctgtctctgccacaacggcttcaaggccaccgccgaccagaca
atgtgcatggatattgatgagtgtgacaggcagccgtgtgggaacggaacctgtaagaac
acggtgggctcctacaactgtctctgcttccctggattcgagctcacgcacaacaatgac
tgcatggacattgatgagtgcagtgcgttggtgggtcaggtgtgtagaaacggccagtgt
atcaacagcctgggatccttccagtgtctctgtcaggatggctacgaactcacccccgac
ggaaaaaactgtgtcgatatcaatgagtgtgtgagtcttcctggtacctgctctcctgga
acctgtcagaacctggacgggtcgttccgctgtatctgcccatctggatacgaggtccag
aacgaccagtgtatagatatcaacgagtgtgaggtggagcccaatatctgccagtttggc
acgtgcaccaacaccccaggaagcttccagtgtatctgccagaagggcttcgtcctgtcg
gacaatgggcgccgctgtttggataccagagagagcttctgtttcacacgcttcgagtca
ggcaagtgttctgtgcccaaggccttcaacaccaccaaggccaagtgctgctgcagcaag
atgccaggcgagggctggggagacccctgcgagctgtgcccacgcgagagcgaggcgtcc
tttaaaagcctgtgtccctacggccatggatccctgcctggacttggggacgcccgtgag
gacatgaacgagtgtctggacaacccagcgtcttgtgtgaacggtgtctgtatcaacacg
gacggatcgttccgttgcgagtgtcctttgggctacaacttggatactcagcggggtcaa
tgtgctttgtgaggctgtacctctattttgcgctctcattcttgctctctccctccatct
ctctctccagatatcaacgagtgttctcttaaccccctgctgtgtgccttccgttgtgta
aacacctttggttcctacgagtgcatgtgtccctcgggctatgtgctgcgagacgaccac
cgcatgtgcagagaccaggatgagtgttcagaggggctggatgactgtgagtccaagggc
atgtcctgtaagaacctgattggcacctttatgtgtatctgcccccttggcatgcagcgc
agacctgacggagagggctgcatggacctgaatgagtgtcgcgcgaagcctggcatctgt
aagaacgggcgctgtgagaacacagtgggcagctaccgctgtgtatgcaacgagggcttc
cagcccagctccactggaacggactgtatcgataaccgacagggcttctgtttcacrgag
gtgctccagactatgtgtcagcggggctccaccaacaggaacagtgtcaccaaatctgag
tgctgctgcaatcttgggcgcggctggggaccccagtgtgagctctgcccactgcctggc
accgtgcagtacaagaggatgtgcccactgggacccgggtacaccaccgacggcagagac
atcaatgagtgcacggtgatgccagacctgtgtaagaarggccagtgcatcaacaccatc
ggatcgttccgctgccactgcaacgtgggttataccaccgacttcaccggcacctcctgc
attgatatggatgagtgttccgcytctcccaagccctgtaacttcctgtgtaagaacaca
gagggcagctacctgtgctcctgccccagaggatacaccatgcagcctgacggaaagacc
tgcaaagatctggatgagtgttccaccaagcagcacaactgtcagttcctgtgtgtcaac
accatcggaggtttcacctgcaagtgtcctgcaggcttcacccagcaccagaccgcctgc
atcgacaacaatgagtgtaatgggcagaacagtgtgtgtggctccagagcctcctgtgtc
aacactcccggcagcttcaactgtgactgtgggaaaggcttctctctggacaccactggc
ctggagtgtgaagatgtggatgagtgtggcagtaaccatcgctgtcagcacggctgtcag
aacatgatgggaggcttccgctgtggctgtcctcagggctatgtgcaacactaccagtgg
aaccagtgtgtggatgagaatgagtgttcgggtgcgtctgtgtgtggctcggcctcctgc
tacaacaccctgggcagctttaagtgtttgtgtccgtccggctttgactttgaacaggga
gggggcggctgccaggatgtcaatgagtgttccatgggcagtaacccctgcagcttcggc
tgctccaacacagacggaggatacctgtgtggatgccctggagggtactacagggctgga
cagggtcattgtataacgggccagggcttccaggaccagtatagttcagagggagacgat
gaggacagtctgtctccagaggcctgctacgaatgtaagatcaatggagacgtcggcaag
aagggccgacacagacgtcacgctgctggggacaacgacctcaaggaggtgagcatggcc
agcgtggacacccaggagtccatccccatgaacctgagcctggcctcgctgcacaacaag
gagcccctgctggagctgctgccggccctggagcccctggagcaccatgtgcgctacgtc
atcacccacggcaaccagggcgagcactttcgcctgctggagcgccgsgacgggaagagc
gtgctgaggttgggcaggaagtcgcctccccctggctcctaccgcctggagatcgccagc
ctgcccctgttcgggccgcggcgcctccgacagctggaggaggaacatgacagcgactac
ctgctgggagagataggagacgccctacgcatcaagctgcacatccacctgcactga
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integrated database retrieval system
