Salvelinus sp. IW2-2015 (Arctic char): 111975957
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Entry
111975957 CDS
T05762
Symbol
cacna1e
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111975957 (cacna1e)
04020 Calcium signaling pathway
111975957 (cacna1e)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111975957 (cacna1e)
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111975957 (cacna1e)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
111975957
NCBI-ProteinID:
XP_023860399
LinkDB
All DBs
Position
LG16:complement(20445830..20585745)
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AA seq
2239 aa
AA seq
DB search
MILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGIKVVALGFVLHKG
SYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKS
IMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHNTCLPMPNILENETVDKSESEFPCG
VRKCPDKYACSETWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGPTWNC
MYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWID
RAEEVMLAEENKNLGPSALDVLKRATIKRRGVDAVHRGPEEEQYGDISSVGIPMTRASIR
SAKRGPTAYFKRKERLLRISIRRMVKTHIFYWTVLGLVALNTLCVAIVHHNQPHWLSVFL
YYAEFLFLGLFLTEMCLKMYSLGPRLYFHSAFNRFDCGVIVGSIFEVMWGFFRPDMSFGI
SVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLIFLLFLFILVFALLGMQLFGGR
FIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLF
GNYTLLNVFLAIAVDNLANAQELTKDEEDEEAAFNQKHALQKAKEVGAMSSLMSSQRRRP
YLYRKRAIHRSRPAYSLEEAESLAEGPPCPPLNSSNSFMSRGERRRRMTMSVWEQRTSQL
RRHRQMSSREILFSSPSEEQEAPPGCPHNLKATGTPTGSLKLAEPAASTAQPPKPMDLTL
EEPPLSMGVQEPPLSVPLAEPPIPIDSPLPDPSMSTVVSIPEPTDSEPCPEGQLDVTDHC
HPGLNGRRSPRLNGERRQRAVRKFRPPAGDTLTSDMAGMRLRRPRGTGHHEAQVGARGLD
SPQGEGSSRSVSRERKTPEERQDKERRACNTGETSQPSETREAEHRQGDPNQAGGPELLN
REEGPQSERFQAAVPELPEGQTGDSDTGNNATTLNQDKSPLSSSIYIEVTNVQSSLELTP
ITGNSKDMEASKPEKEEEQLSSPANIVTPDSMFIFKPGNPIRRACHYVVNLRYFETCILL
VIAASSIALAAEDPVSATSNWNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDL
WNILDFIVVVGALVAFALTNVLGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDC
VVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSKDTEKDCQGFYIDYEKDKK
EVKRRDWRRHDFHYDNIVWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRGNRMEMSI
FYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMP
QNRQTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLKHLNTAFTVLF
SVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVLXTYSLISLKSIETFNMGFLKLF
RAARLIKLLRQGYTIRILLWTFVQSFRFLFQALPYVCLLIAMLFFIYAIIGMQVFGNIRL
DEETHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQKCEPDPLALTSDHEERCG
TEFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAA
CGRIHYTDMYEMLTLMSPPLGLGKKCPSKVAYKRLVLMNMPVDEEMSVHFTSTLMALIRT
ALEVKIARGGEDRGQMDSDLQKEISVIWSHLSQKTLDLLVPIHKASHMTIGKIYAAMMIM
DYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCSAKALPFLPHSPGSALTRGGFV
ALSPISPQEMFMQPMSQDLEDKEEDYHNYHNHHLLHHQLHTLVPERKEFNRNLCPTNRQD
APLRVPGRAVSIRASSMPRLAVDTQVGTDSSKSMKRSFSTIGDQCVNGLWQEEYSLKRVS
PDRLNRPRQRSIRGIRCNLREPVDHERGRSKERRHLLSPDVSRCNSEERSQDPSQERKQS
RSPSEGRTHALHRQGNTSGSPDLSSTPRGRRQLPQTPLRPRPHISYSPLVCRAHLSPPAA
SEGRARTQEAPGEMEDPSLREEGERLDPESGAGVGVVIGVGGPRLGVSHPHPSPHRYISE
PYLTLHEELHSPDSSGLDETLTFEAAIATSLGRANTISSAPQLRHNWQVPNGHFHKRLGQ
ASSVVACELLSDTDEDDRC
NT seq
6720 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagccaccatcatcgccaactgtatcgtattggctttggagcagcacctgcct
ggagaggacaagactcccatgtccaagagactggaaaagacagagccttacttcattggg
atgttctgctttgaagctgggattaaggttgtggcgttgggatttgttctccataaaggc
tcctacttaaggaacggctggaacgtcatggacttcattgtggttctgagtgggattctg
gccacagcgggagctcacatgaacatcccagtggacctgcggaccctgcgggccgtacgc
gtgctcagacccctcaaactggtctctggaatccccagcctgcagatagtcctgaagtcc
atcatgaaagccatggtgccgctgctccagatcggcctgctgctcttcttcgccattctc
atgtttgccatcatcggcctggagttctacagcggaaagctccacaacacctgtctgccc
atgccaaatatcctggagaatgagacggtggacaagtctgagtcagagttcccgtgtggg
gtgaggaagtgccctgacaagtacgcctgcagtgaaacctggatcggccccaacgatggc
atcacccagtttgataacatcttgtttgctgtgctcaccgtcttccagtgcatcaccatg
gagggctggaccaccgtgctctacaataccaacgatgccttaggccccacgtggaactgc
atgtacttcatccctctgataatcatcggctccttcttcgtgctgaacctggttttagga
gttctctcaggggagtttgccaaggagagggagcgggtggaaaaccgcagggcgttcatg
aagctacggaggcaacagcaaattgagcgggaactcaatggctaccgagcctggatcgac
agagcagaagaggtgatgcttgcggaggagaataagaatttaggaccttctgctcttgat
gtgctgaagagggccaccatcaagaggagaggggtggatgccgtccatcggggcccagag
gaggagcagtacggtgacatctcttctgtgggcatcccgatgaccagagccagcatcagg
agtgctaagagaggacccacagcttatttcaagcggaaggagcgtctgctgcgtatctct
atccgccgcatggtgaagacacacatcttctactggaccgtactgggcctggtggccctc
aacacactctgtgttgccatcgtccatcacaaccaaccccactggctgtctgtgttcctc
tactatgcagagtttctcttcctgggtctctttctcactgagatgtgtttaaagatgtac
agcctgggacccagactctacttccactccgccttcaaccgcttcgactgcggcgtgata
gtgggcagcatctttgaggtgatgtgggggttcttcaggcctgacatgtcctttggcatc
agtgtgctgcgcgctctccgtctgctgaggatattcaagatcaccaagtactgggcgtcg
ctgaggaacctggtggtatccctgatgaattctatgaagtccatcatcagcctcatcttc
ctcctcttcctcttcatcctggtctttgctctgctgggcatgcagctattcggtggcagg
ttcatctttgaagactacactcctacaaactttgacacatttcctgctgccatcatgact
gtctttcagatcctgacaggagaagactggaatgaggtgatgtacaatgggatccgctcc
cagggaggagtgaagtcaggaatgtggtcctccatatacttcattgtgctcacactcttt
ggtaactacacactgctgaatgtcttcttggccattgctgtggacaatctggctaatgcc
caggaactaaccaaggacgaagaggacgaagaggctgctttcaatcagaaacatgctctc
caaaaagccaaggaagttggggccatgtcttccctgatgtcatcacagaggaggagaccc
tacctgtacaggaaaagagcgatacacaggagcaggcctgcctactctctggaggaggct
gagagcctcgccgaggggcccccctgcccgccattgaattcctctaactctttcatgtcc
aggggagagaggagaagacggatgaccatgtctgtgtgggagcagagaaccagccaactg
cgcaggcaccggcagatgtccagccgagagatcctcttcagcagccccagtgaggagcag
gaagcgccccctggatgcccccacaacctcaaagccacaggcacacccacaggcagcctg
aagctggctgaacctgcggcctccacagctcagccccccaagcccatggacctaactcta
gaggagccacccctgtccatgggggtccaagagccccccttgtccgtccctttagcagag
ccacccatacccatcgacagtcccctgcctgacccctccatgtccacagttgtgtccatt
ccggagcccactgactctgagccgtgcccagagggccagcttgatgtcaccgaccactgc
cacccaggtctcaatggccgcaggagccccaggttaaatggggagagaaggcagagagcg
gtgcgtaagttccgccctcctgctggtgacaccctgacctctgacatggcagggatgagg
ctcaggaggccaaggggtacagggcaccacgaagcccaggttggggctagaggcctggac
tcaccccagggggaggggagcagtcgctctgtcagcagggagaggaagaccccagaggaa
cgacaggacaaggagaggagagcctgtaacacgggagagaccagccagccttctgagacc
agggaagctgaacacagacagggtgaccctaaccaggctgggggtcctgagctgctgaac
agggaggagggtccacagtcagaacgatttcaggctgcagtaccggagctcccagagggc
cagacaggagacagtgatactggtaacaacgccaccactctgaaccaggataagtcccct
ctgagctccagtatctacatagaggtgaccaatgttcagtcttcactagagctcaccccc
atcacaggtaatagtaaagacatggaggcgtccaagcctgagaaggaagaggagcagttg
tccagcccagccaatattgtcacgcctgacagcatgttcatcttcaaacctggcaacccg
atccgccgggcctgtcactatgtggtgaacctgcgttactttgagacatgcatcctgctg
gtgatcgctgccagcagtatcgccctggctgcagaggaccccgtgtcagccacctctaac
tggaacaaagttttgcgttactttgactacgtgttcacaggtgtctttacatttgaaatg
ataataaagatgatagaccagggcttgattctccatgacggctcctatttccgggacctg
tggaacattctcgactttatcgtggtggtcggagctctggtagccttcgccctcacgaat
gtgttgggaaataataaaggacgggacatcaaaaccatcaagtctcttcgggtcctgcgc
gtcctgaggcccctgaagaccatcaagagactaccgaaacttaaggcagtgtttgactgt
gtggtgacctctctgaagaacgtcttcaacatcctcatcgtctacaagctcttcatgttc
atcttcgctgtcatcgctgtgcagctgttcaaagggaaattcttctactgcacagacgga
tccaaagacacagagaaggactgccaaggcttctacattgactatgagaaggataagaag
gaagtgaagaggagggattggaggagacatgacttccactatgacaacatagtctgggcc
ctactcactctgtttactgtctccactggggagggctggccacaggtcctgcagcactct
gtggacgtgacagaggaggacagaggtcccagccggggcaacaggatggagatgtccata
ttctatgtcatctactttgtggtcttccccttcttcttcgtcaacatctttgtggctctc
atcatcatcaccttccaggagcagggagacaagatgatggaggaatgcagcttggagaag
aacgagagggcttgcattgactttgccataagtgccaaacccctgacccgctacatgcct
cagaacagacagacgttccagtaccgtctctggcactttgtggtctccccctccttcgaa
tacactgtgctggccatgattgcactcaacaccattgtcctgatgatgaagtattactct
gccccaccagcatacgaggctgtgctgaaacacctgaacacagctttcactgtgctcttc
tctgtggagtgtgtcctcaagatcatggcctttggctttctgaactactttcgagacact
tggaatatattcgacttcatcacagttttgggaagcatcacagaaatagtgctgtaaaca
tactctctcatctccctgaagtcaattgagaccttcaacatgggcttcctgaagctgttc
cgtgcagccagactgatcaagctgttgaggcagggttacaccatccgcatcctgctctgg
acctttgtccagtcctttaggtttctctttcaggctctcccctacgtttgtctgctcatt
gccatgctctttttcatatatgcaatcatcggaatgcaggtttttggaaacatcagactg
gatgaggagactcacatcaaccaacacaacaacttcaagaccttttttggtgctctgatg
ttgctattcaggagtgccacgggggagtcgtggcaggagatcatgctgtcatgtttaggg
gggcagaagtgtgagccagaccccttagctctaacgtcagaccatgaggagcgctgtgga
actgagtttgcctacttctacttcgtctccttcatcttcttcagctcatttctaatgctg
aatctgtttgtggctgtaatcatggacaactttgagtacctcacccgggattcctcgata
ttggggcctcaccacctggatgaatttgttcgtatctggggtgaatatgaccgagctgct
tgcgggcgtattcattacactgacatgtatgaaatgctgaccctcatgtcgccacctcta
ggcctcggcaagaaatgtccatccaaagtggcttataagaggctggtgctgatgaacatg
cctgtggatgaagagatgtcggttcacttcacctccaccctcatggccctgatccgaacc
gccctcgaggtgaaaatagccagaggaggggaggaccgaggtcagatggattcagatcta
cagaaggagataagtgtcatttggtcacacctttcacagaagaccctggacctgctcgtc
cccatccacaaagccagtcatatgaccattgggaagatctatgcagccatgatgatcatg
gactactacaagcagagcaaagccaagaagctcaggcaacagctggaggagcagaaacac
gctcccatgttccagcgtatggacgcttcctctctgcctcaagagatcctctgcagtgcc
aaagccctccctttcctgccccacagccctggatctgccctgaccagaggaggatttgtg
gccttgagtcccatatcccctcaggagatgttcatgcagcccatgtcccaggacctagag
gacaaagaggaggactaccacaactatcacaaccaccacctgctccaccaccagctccac
acactggttccggagcgcaaagagtttaaccgcaacctttgccccactaacaggcaggat
gccccactcagggtgcccgggcgggcagtctctatccgagcctcctctatgcctcggctg
gctgtagacacacaggtggggacagacagcagcaaatcgatgaagcgctccttctccact
attggggatcaatgtgtgaatggcctgtggcaggaggagtactctctgaagagggtcagt
cctgaccgtctgaacagaccacgacagaggagcatcagaggaatcaggtgcaacctcagg
gaaccagtggatcatgagcgggggcgctccaaagagaggcgccacctgctgtctcccgac
gtgtcccgctgcaactctgaggagcggagccaggacccgtcacaggaacgcaagcagtcc
cgttcccccagcgagggacgcacacatgccctccacagacagggcaacacttcaggcagc
ccagacctgtccagcacaccccgcggccggcgccagctcccccagacgcccttgcggcca
cgccctcacatctcctactcccccctggtgtgccgagcccacctctccccccctgctgcc
agtgagggcagagcccggacccaggaggcccccggagagatggaggatccctcgttgaga
gaggagggggagaggctagacccagagtcaggagcgggggtgggggtggtaataggggtg
ggtggcccaaggttaggggtcagtcacccgcacccctcacctcaccggtacatctcggag
ccgtacctgaccctgcacgaggagttacacagcccagactcctcaggcctggatgagact
ctgaccttcgaggcggccattgcaaccagtctgggcagggccaacaccatcagctctgcc
ccccagctcagacacaactggcaggtccccaacggacacttccataaacgcctgggtcag
gccagctctgtggttgcctgcgagctcttgagtgacaccgacgaggatgaccgctgttaa
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integrated database retrieval system
