Salvelinus sp. IW2-2015 (Arctic char): 111975971
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Entry
111975971 CDS
T05762
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
salp00535
]
111975971
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
111975971
Proteoglycans [BR:
salp00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
111975971
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
Others
111975971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
Fz
Put_Phosphatase
DUF5856
Zn_ribbon_9
Motif
Other DBs
NCBI-GeneID:
111975971
NCBI-ProteinID:
XP_023860411
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Position
LG2:complement(16855862..16974647)
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AA seq
569 aa
AA seq
DB search
MLRYQTVLWTFSLLSVAAGSDFKARNCSGVKEASIAKGFSFENVPLQQMSGDHLRVCPPG
NTCCSSEMEDKFGQQSKLELENLVDETSKELRSTFVSRHKKFDEFFLELLENTEKSLNEM
FVRTYGKPYMQNSEVFQNLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
DDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLSVGREVANRVSKVSSTPA
CIRALTKMMYCPYCQAIPSVKPCNNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRLE
GPFNIESVMEPIDVKISEAIMNMQDNSVQVSYRVFQGCGQPKPSGMGGRSTRGVSDVFNA
RFRPYSPEERPTTAAGTSLDRLRTVWSAMQHSVIDIKEKLKLFKKLWSNLPEDICQPHRV
TAGNATDDDQCWNGHTKGRYFPEVMKDGLTNQVNNPEVGVDITRPDTFIRQQIMALRVMT
NKLKNAYNGNDIYFQDSSDEGSGSGSGSGCTETCVTEFDFASTEAPVVGADRSGSGPVED
SAAATHPSPSAALLASLALSVLALHRLWR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgctgagataccagaccgtcctttggactttctcattgctgtctgttgcagctggatcc
gattttaaagcacgtaactgcagtggggttaaagaagcttctattgcgaaaggcttcagc
tttgaaaatgttcctctccaacaaatgtcaggtgaccatctccgggtatgtcccccgggc
aatacctgttgcagttcagaaatggaggacaagtttggccaacaaagcaagctggagtta
gagaacctggttgatgaaactagtaaagaattgcgaagcaccttcgtctccagacataaa
aagtttgatgagttcttcctggagctgctggagaacacggagaagtccctgaacgagatg
ttcgtgcggacctatggcaagccttacatgcagaactcagaagtcttccagaacctgttt
gccgagctgaagcgctactacactgggggcaacgtgaacctggaggagatgctcaacgac
ttctggtcgcggctgctggagcgcatgttcacgctgctcaactcccagtacgtaatcaca
gatgactatctggagtgcatcagcaagtacacagaccagctcaaaccctttggagacgtg
cccaggaagctcaaagctcaggttacaagggccttcattgcagcccgcacattcgtccag
gggctctcggttggtcgagaggtggccaacagggtgtccaaggtgagcagcaccccagcg
tgtatccgagcactgaccaagatgatgtactgcccatactgccaagccataccctccgtg
aagccctgcaacaactactgtctgaacgtcatgaagggctgcctcgccaaccaggccgat
ctggacccagagtggaaccagtacatcgatgccatgttgctggtggcacagaggctggag
ggacccttcaacatcgagtctgtcatggaacccattgatgtcaagatttcggaggccatc
atgaatatgcaagataacagtgtccaagtctcctacagggtttttcaaggctgcggccaa
ccaaagccctcaggaatgggcggcaggtctactcggggcgtctcggacgtgttcaacgcc
cgcttcaggccctacagcccagaggagcggcccaccactgcagctggcaccagcctggac
agactgaggactgtctggagtgcaatgcaacacagtgtgattgacatcaaggagaaactg
aagctgttcaagaagttgtggtccaacctgcctgaggacatctgccagccacacagggtg
acagcagggaatgccaccgatgacgaccagtgttggaatgggcacaccaagggcaggtat
ttcccagaggttatgaaagacggattgaccaatcaggtgaataacccggaagtgggcgtg
gacatcaccaggccggacacgttcattcgccagcagatcatggctctgagagtgatgaca
aacaagttaaaaaatgcctacaatggcaatgatatctactttcaagactcaagtgatgag
ggcagtggctcaggcagtggcagcggctgcacggagacctgcgtcactgagtttgacttt
gccagcaccgaggccccggtggtgggagcggaccggagcgggagcggcccggtggaggat
tcagcagcagccacacatccttccccctcagcagccctgctggccagcctggccctctca
gtcctggcactgcacaggctatggagataa
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