Salvelinus sp. IW2-2015 (Arctic char): 111976039
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Entry
111976039 CDS
T05762
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03010
Ribosome
salp04120
Ubiquitin mediated proteolysis
salp04137
Mitophagy - animal
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
111976039
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111976039
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111976039
04137 Mitophagy - animal
111976039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
salp03011
]
111976039
04121 Ubiquitin system [BR:
salp04121
]
111976039
Ribosome [BR:
salp03011
]
Ribosomal proteins
Eukaryotes
Large subunit
111976039
Archaea
111976039
Ubiquitin system [BR:
salp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
111976039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
111976039
NCBI-ProteinID:
XP_023860524
LinkDB
All DBs
Position
LG16:9367983..9370048
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagacgttgacggggaaaaccatcacccttgaggttgagcccagc
gatactattgaaaatgtcaaggccaagatccaggataaggaaggtattcctcctgaccag
cagcgtctgatcttcgctggaaaacagcttgaagatggtcgcaccttgtcagactacaac
atccagaaagagtccaccctgcatcttgtgctgcgcctgcgtggaggcatcattgagcca
tctctgagacagctggcccagaagtacaactgcgacaaaatgatctgccgcaagtgctac
gctcgcctccatcctcgtgctgttaactgccgcaagaagaagtgtggacacaccagcaac
ctgcgccccaagaagaagctgaagtaa
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