Salvelinus sp. IW2-2015 (Arctic char): 111976043
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Entry
111976043 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111976043
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111976043
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111976043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_5
zf-RING_2
TRAF3_RING
Cas12f1-like_TNB
Prok-RING_4
DUF1232
Motif
Other DBs
NCBI-GeneID:
111976043
NCBI-ProteinID:
XP_023860529
LinkDB
All DBs
Position
LG16:22708904..22719657
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AA seq
245 aa
AA seq
DB search
MNQTMHTSHSSHPRCDPLPEVTVGQGHLGSSSEHTQDRTSLKHVTYSKNSSQICPSAGHR
DWLCPVCLHTASFPVQTNCGHLFCAPCLISYWRHGSWLDAISCPLCRQKVKVLCRLFSKG
CSDSKEREVLGEITDYNKRYSGAPRKVTDYLCDTPLFLQLLIRRLGTMGGLVCLFFLRVA
LCCLGTVVSLASPPLDAPPSLPGLLGVLDDLVVVFLLLICVININQQMAPDSGNSSAHTG
GRPVQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaccatgcacacctcacacagctctcatcccagatgtgaccctctgcctgag
gtcacagtgggtcagggtcacctaggatcgtcctcagaacacacacaggatcgaacatcc
ctcaaacatgtgacctacagcaagaactcctctcagatctgtccatccgcgggccacaga
gactggctctgccctgtatgtctacatactgccagtttccccgtacagaccaactgtggc
catctcttctgtgctccctgtctgatctcctactggagacatgggtcctggctggacgcc
ataagctgccctctgtgtagacaaaaggtcaaggtcctgtgtcgtctgttcagtaagggt
tgttcagacagtaaagagagggaggttctgggagaaatcacagactacaacaaacgctac
tcaggagcccctcgaaaggtgacagactacctgtgtgacacgcccctgttcctgcagctg
ctaatccgccgcctgggcaccatgggggggctagtgtgcctcttcttcctccgggtggca
ctttgctgtctggggactgtggtgtccctcgcctcacctcctctggacgctccaccctcc
ctgcctggcctcctgggggtcctggatgacctggtggtggttttcctgctgctcatctgt
gttatcaatatcaaccagcagatggcaccagatagtgggaactcctcagcgcacacaggg
ggtaggcctgttcagtaa
DBGET
integrated database retrieval system
