Salvelinus sp. IW2-2015 (Arctic char): 111976146
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Entry
111976146 CDS
T05762
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111976146
Membrane trafficking [BR:
salp04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
111976146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
111976146
NCBI-ProteinID:
XP_023860672
LinkDB
All DBs
Position
LG16:complement(26806864..26843459)
Genome browser
AA seq
1534 aa
AA seq
DB search
MASKEITASCFVSVSRDITESIRKIIDKSSTKFIRGIKLETKNGKSDDRILVLTTWRLYL
LVAKVPTKIEVTFNFLEIRAMNSHPEHQVVIDTDKSTYSLWLQSRDHLSHVVSHVNFALS
RIFNNSVFAPSICHSDSELSEGSRKYSPSSETSMETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNREFNLVDFSHLESRDLAVIVASMAYNTWFTKLYCKDIRIGSEVTE
QVLHTLSKSSSLEEITLENAGLKSDFPQKLSVALSENPASVIHSLNLAHNTLDNQGVANL
IQQVCRLSKGLRLLNLSKTFINSKGVVSLSQALCSSDEYSNSLLHLDLSKNPGFLSGEDA
SNLCLFLSQPNCLVHLDLSGTDCSVDSLFGALLRGCCADLSYLNLSRNTFSHRKVKETLP
LFRQFFSSAFSLTHVSLASMKLPPEALRSLFIGLTTNPHINDLHLDISGCELKSAGASVI
QELFPRLSSIATLDISDNGLDADLLSVLPALSRHTSLKHLYLGKNFNIKSRVLDEILHKL
VQLIQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDLSGNSLEDIGAKMLSKAL
QINTTLRSVTWDRNNTSATGFLDVARALEHNFTLQYMPLPLSDISQAYRSTSERTEQALT
KIQRALLRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLSVCVQQQVCVLRGVGEMEEIQ
AAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDQLAGELTKAADKELQVIVDSMVS
LCRELCPLSSSAAERLSPPLSSVSERVSIPRSAIRTALMERAAQDIHRALEEVKLSVVSY
LTNSIVDQILQELYATHKTLTRRVSQVKRWEVTCDGGTGLRSHRHRDSLDLTDDEMGTSI
VSIDTIAIKKHSSRTRRIRPVSTRLSQCDDSSSSPPPSASSSFSAFSRSTSWEGLPELPT
QGAPLHHVTRVRPRPPRRHRAGHAPSDTQNGAVTPIDHGLPDFYTKRVLPDSQLSSLHKA
HSLRRKKRRNMLAIFGFRRNRNSTLSNQGPDSGGDGCGEECRTVTMAPTGTATENVYTLL
QPPLSAARAGSPGEGGDVEDQRLEEPVGLSLQPVQSIPPQPGMPGRRHPFYSLSQQSELE
TKHEQPADTDRQVDRQWTEDRWVDRQWTEGNHTDRERTLIRPADRQAERHWPEDRLSDKT
WTEGRTAERQMDRYWTESRHTDRHMERQWTVDRHTPRQIDRQFDRDRQWTVSRQQTDRTW
AEGRPKDIQIDRQWIDSRQSGRQTDRQAQGQHLAQRPLPPYPSDRTPSPKSETDSQKNMD
RQKYSDTQTDRHLXSDTAVGQVEGWRDGGGVPPGRVSTSASKPDPPSQSSKPNLSKLRQR
HLQESSEEEAGGERDCGRMERKERERDRDAEGQPPPIPEKPKTSSYVSSPNEYANERPIP
PPAPSAFRKPLLGLAYRAVSQGEEAVRPQAPVKPQRNRKAMSCDTGTDRDSPNNLEKPPN
RKPPVKKPRLPQNRNKSLDYPDSVNLASGNSKLL
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaagagataactgcctcttgttttgtcagtgtgagcagggatattacagag
agtatcaggaagattattgacaagtcctcaaccaagtttatacgtggcattaagcttgaa
accaaaaatggcaaatcagatgataggatactggttctcacaacatggagactctatctc
ctggttgccaaggttccaacaaagatagaggtgacatttaacttcttggagatccgagcc
atgaacagtcacccagagcatcaggtcgtcatagacacggacaagtccacttattccttg
tggctacagtcacgtgaccacctcagtcatgtggtcagccatgttaactttgccctgtcc
agaatatttaacaactctgtgtttgctccctccatctgtcattcagacagtgaactttct
gagggaagcaggaagtactcccccagctcagagacgtctatggaaacccagagggcctgt
ggagggttttcggagacctacgctgccctgtgtgactataatggaatcagctgcaaggag
gaagtgcagtgggatgtggacactatctatcactcccaagacaacagggagtttaatcta
gtggacttcagccacctggaaagcagggacttggcagttattgtggcatcaatggcgtac
aatacctggttcaccaaactatactgtaaggacatacgcatagggtcagaggtcactgag
caggttctgcacaccctcagtaagtcctccagtctggaagaaatcactctggagaatgct
gggctcaaatctgactttcctcagaagctgtcagttgcgctctcagagaatcctgcttct
gtcatccactctctgaatctggcccacaacacactggacaaccaaggtgtggctaacctc
atccagcaagtgtgtcgcctcagcaaaggactgcgtctcctcaacctctccaagaccttc
atcaactccaaaggtgtggtgtctctgtctcaggctctgtgctccagtgatgagtattct
aactctctgctgcacctggacctgagcaagaaccctgggttcctgtctggggaggatgcc
tcgaatctgtgcctgttcctgtcccagcctaattgtctggtccatttggacctgtctggc
actgactgttctgttgactcactatttggggctctgctgaggggttgttgtgccgatctc
tcctacttgaatctctccagaaataccttctcccataggaaagtgaaggagaccctgccg
ttgttccgtcagttcttcagctcggccttcagtctcacccatgtcagcctggcctctatg
aagctgccccctgaggccctgaggtctctcttcatcggtctgaccacaaaccctcacatc
aatgacctacacctggacattagtggctgtgagctgaaatctgcaggagcttctgtgatc
caggagctgttccctaggctctcctccatcgccactctggacatctcagacaacgggctg
gatgcagaccttctctcagttctaccagctctctccagacacacctccctaaagcacctg
tatctgggcaagaacttcaacatcaagagcagggtgctggatgaaatcctacacaagctg
gtccaactcatacaggaggaggagtgtgccctccagtccctctcactggctgactcgcgg
ctgcgttctcggggtacagtgctggtaaacgctctgggcagcaacacctgtctgcgaaag
gtggacctgagtgggaacagcctggaggacattggagccaagatgctgagcaaagcccta
cagatcaacaccacactcaggagtgtgacgtgggatcgtaacaacacctcagctacagga
ttcctggatgtggctcgagcccttgaacataacttcaccttgcagtacatgcccctcccc
ctcagtgacatcagccaggcgtaccgtagtacctcggagaggacagagcaggcactgacc
aagatccagcgtgctctgctgcggaacaaccagactcagcgcttctctcagagacaggct
ctacggctgcaccagggcctggtcaccagcactgctgaacaggtgatggagcgtctgagt
gtgtgtgtgcagcagcaggtgtgtgtgctgcgtggagtaggggagatggaggagattcaa
gctgctaaacaggtgctgaaggaggccagaaactcccgtgcgctgtacccctctctctgt
gagctagctcatgtgctgtcagtagacgggccagtcagacagagactggaccaactggca
ggggaactgaccaaagcagctgacaaggaactacaggtgattgttgattccatggtgtct
ctctgtcgtgagttgtgcccgctgtcctcctctgcagcggagagattaagtcctccgctc
tcgtctgtctcggagcgcgtctccatccctcgctccgccatccgcacagccttgatggag
agagcagcacaggacattcaccgagcgctggaggaggtgaagctctcagtggtctcctat
ctcaccaactccattgtggatcagatcttgcaggagctctacgccactcacaagactctg
acgcgtcgggtgtcccaggtgaagcgctgggaggtaacatgtgacggaggaacaggtctg
aggtcacacagacacagagactctctggacctcacagatgatgagatgggcaccagtata
gtgagcattgacacaattgccattaagaagcatagctctagaactagacgtattcgacct
gtctctaccaggctgagccagtgtgatgactccagctcctccccacccccctctgcgtcc
tcttctttctcggccttctctcgctctacgtcctgggaggggctgcctgagctccctacc
caaggtgcacctctccatcatgtgacgcgggttaggccgaggcccccacggaggcaccga
gcaggacatgccccctctgacacacaaaatggagctgtcacccctattgatcatggactc
ccagatttctacaccaagagagtgctccctgatagtcagttgtcctctctccataaagcc
cactccctcagacgaaagaagagacgcaatatgctggccatctttggtttccgtaggaac
cgcaactcaacyctctccaatcaggggccagattctggcggagacggatgtggggaagag
tgtcgcactgtcaccatggcacccacagggacagccactgagaatgtctacacactgctg
cagccccctctctctgctgccagggcaggctctcctggtgaggggggtgatgtggaggac
cagaggttggaggagccagtgggcctgagcctgcagccagtgcagagcataccaccacag
cctggcatgccaggtagaagacaccccttctactcactcagccagcaatcagagctagag
acaaagcacgagcaacctgcagatacagacagacaggtggacagacagtggacagaagac
agatgggtggacagacagtggacagaggggaatcacacagacagagagagaacattaata
agaccggctgacagacaggctgaacggcactggccagaggacagactgtcagacaaaaca
tggacagagggaagaacggcagaaagacagatggacagatattggacggagagcaggcat
acagatagacacatggaaagacagtggacagttgacagacacacaccgagacagatcgac
agacagtttgatcgagatagacagtggacggtgagcagacaacagacagacagaacgtgg
gcagagggtcgaccgaaagacatacagatagacagacagtggatagacagcaggcagtca
ggcagacagactgacagacaagcccagggacaacatctggctcagagaccgctgccccct
tacccatcagacaggactccatcacctaaaagtgagactgactctcagaaaaacatggac
agacagaagtactctgacacacagacggacagacacctgcyctcagacactgctgtagga
caggtggaagggtggagggatggaggaggggttccccctggacgggtttctacgagtgca
tctaaaccagaccctccttcccagagcagcaaacccaacctgtccaaactgagacagaga
catctacaggagagctctgaggaggaagcaggcggagagagggattgtggaagaatggaa
aggaaagagagagagagagacagagatgcagagggacagcctcctcccattcctgaaaag
ccwaagacatcatcctatgtgtcttctccaaacgagtatgccaatgaaaggccgatcccg
cctcctgcaccatctgcattcagaaagccattgctgggattggcctacagggctgtcagc
caaggtgaggaagcagtgaggcctcaagcccccgtgaaaccccagaggaacagaaaggct
atgtcttgtgacacaggcactgacagggatagccctaataatcttgagaagcccccaaat
cgcaaaccccctgtgaaaaaacctagactaccccagaacagaaacaaatccttggactat
cctgacagtgtcaacttagcgtctggtaacagcaagctgttgtga
DBGET
integrated database retrieval system
