Salvelinus sp. IW2-2015 (Arctic char): 111976149
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Entry
111976149 CDS
T05762
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111976149
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111976149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
111976149
NCBI-ProteinID:
XP_023860674
LinkDB
All DBs
Position
LG16:complement(12466968..12576948)
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AA seq
1532 aa
AA seq
DB search
MPTLPSPSLAMDGENYLHPEGPQLDSSMFEVASSNMESSMYPSASWGSLSQQSGGYSAHC
PMQSGNQQYHLNDTMPDMHIDMFSHSGFHDDFPCLNLPRNGGFPQDLSCIDDLSNNSLFS
SPADSLSEYADAQDFIHADNLAHVPTLWDINTPAQSQLELNANRFQGLSSLEDISAIIST
PPLGGYQVQRTQTPAEEEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSV
PPPDITYTLSIPNLTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGR
TVAGIILENYLKGRKKALWFSVSNDLKYDAERDLKDINAPTIPVHALNKIKYGDTATSEG
VLFATYSALIGESQAGGQRRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLD
LQHKLPLARVVYASATGASEPKNMIYMSRLGIWGDGTPFKTFDDFLHAIEKRGVGAMEIV
AMDMKVSGMYIARQLSFSGVSFRIEEISLDDDFKLVYNKSAKLWAETLAVFMRAADELCL
VSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELANKELEAGKCIVIGLQSTGEARTREVL
DENDGHLDRFVSAAEGVFKALVQKHFPSEKPRREKAPGNKRKRKPRGRQPKFPKHTIVDP
GGVINISDDSSTDTDGMDTDSNSSPDSLLDNNNDDDVIFVDTRIEEMKQGLLNKIADLGK
ELPLNTLDELIDKLGGPEKVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKEKDR
FMCGEKLVAIISEAASSGISLQADKRVKNQCRRVHMTLELPWSADRAIQQFGRTHRSNQV
TAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKALD
KITKAILGHIESKVSPPKGYPGGDAVFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSITKF
LNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQETFMT
VGNPQDGQVVLYKISVDRGMPWEEAYEKAQNLNSPDEGFYLSYKLRGNHPCVLLAEQGRG
RNFIVYKPNIGKQAHPESLDNLQQRYRKVTPDEAKDSWESQFNFSFGKCSHANWNGKCKK
IEEGQECLQGMRLRQYHMLCGALLRVWKRVADVVSDITSSSILQIVRLKTKNSNKQVGIK
IPENCVARVRVELLKMDEEVKRRRKEREQHAQEQRLAEQRQLQDIHLLAKPYSQPHSLSQ
SHRTQNFYQSLTQAKPLQVKPLLQPKPPQVKPQPSPINQLPSMASIFSHFSHHFPSLPPM
QPAPTSTTKPFRVGEEVLDLTVSSSPSPDSTEGVLGLVSLTGGSDFDLERLISRHALAAQ
NTAHILQQPLQPPLIKQRQLQSPQQIQPQLQQWSDQPLINSAHQDYYILDHPDSLPYSLS
SQTATNPATSSTSSSSSNTVAHVSSGHLSSPSTPSSHFSSTALAPSEQQPLANSHCSTDT
LINAREVLDNMMRTSADRQSVIQYQPNEWDSA
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgcccacactcccgtcaccctcactggccatggacggggagaactacctgcacccagag
gggccgcagctggacagcagcatgttcgaagtggcctcttccaatatggagagttctatg
tatccttctgcttcctggggatcgctctcacagcagtctggaggctacagcgcacactgc
cctatgcaatctggaaaccagcaataccacttgaatgacaccatgccggatatgcacatc
gacatgttcagccattctgggttccatgatgatttcccctgcctcaatctccccagaaac
ggaggcttccctcaggacctgtcctgcatcgatgacctctccaacaactctctgttctcc
tctccggccgactctctgtcagagtacgccgatgcccaggacttcatccacgcagacaac
ctggcccacgtgcccacgctatgggacataaacacaccagcacagagccagctggagcta
aatgccaaccggtttcagggtttgagcagtttggaggatatctctgccattatcagcacc
ccacctttgggaggataccaggttcagagaacccagactccggcagaagaggaggaggag
gaggaggagacagaggagctgggacatgtagacacctacgccgactacaaaccatccaaa
tccaccatagggatctcccacccagacatagtggtggagaccaacacgctgtccagcgtc
cctcctcctgacatcacctacactctatccattcctaacctcaccatcaactgtggcctg
ctctctgccctgcaactcgaggccatcatctacgcctgccagcaacatgaggtgatcctg
cagaacaaccagagagcaggcttcctgataggagacggggccggagtggggaagggccgt
acggtggccggcatcatcctggagaattacctaaaaggaaggaagaaagcactatggttc
agtgtgtccaatgacctgaaatacgacgcagagagagatctcaaagacataaatgctccc
actattcctgtgcatgccttaaacaagataaagtatggcgacacagctacctcagaagga
gtcctgtttgcgacatactctgctctgattggggagagtcaagcaggagggcagcgccgc
accagactcaagcagatcctggactggtgcaagcccggctttgacggcgtcattgtgttt
gacgaatgccacaaggccaagaatgccacatccaccaagatgggcaaggccgtgctggac
ctgcagcacaagctgcccctggccagggtggtttatgccagtgccacaggtgcctctgag
ccaaagaacatgatttatatgagccgcctggggatctggggcgacggcacacctttcaag
acctttgatgatttcctgcacgccatcgagaagaggggtgtgggcgccatggagattgtt
gccatggacatgaaggtgagcgggatgtacatcgcccggcagctgagcttctcaggggtg
tccttccgcattgaggagatcagcctggacgacgacttcaaactggtctacaacaaatct
gccaaactgtgggcggagactctggccgtgttcatgcgtgcagcggatgagctgtgtctg
gtcagcaggaagtccctgtggggtcagttctggtcgtctcaccagcgcttcttcaaatac
ctctgcatcgccgccaaggtccgctgcctggtggagctggccaataaggagctggaggct
ggcaagtgcattgtgattggtctgcagtctacaggagaggcccgaaccagagaggtcctg
gatgagaacgatggacacctggacagattcgtatctgcagcagagggggtgttcaaagct
ctggtacagaaacactttccctctgagaaaccgaggagagagaaagcgcctggaaacaag
agaaaacgtaagcccaggggccggcagcccaagttcccaaagcacaccatagtggatccg
gggggtgtaatcaacatcagtgacgacagcagcacggacacggacggcatggacaccgac
tccaactcctcacccgactccctgctggacaacaacaacgacgacgacgtcatcttcgtc
gacaccaggatagaggagatgaagcagggcctcctgaacaagatcgctgacctggggaag
gagctacctctgaacactctggatgaactcatcgacaagttgggaggtccagagaaagtc
tcggagatgactggtcgtaaggggcgtgtggtgcgacggcctgacgggagcgtgcgctac
gagtcgcgtgcggagcagagccataccatcgaccacatcaaccttaaggagaaggaccgc
ttcatgtgcggagagaagctggtggccatcatctcagaggcggccagctcgggcatctcc
ctgcaggcagacaagcgggtgaagaaccagtgtcggagggtccacatgacgctggagctg
ccctggagtgcagacagagccattcagcagtttggtcgtacccatcgctccaaccaggtg
acggctccagagtacatcttcctcatctctgagctggccggggagagacgctttgcctcc
atcgtggccaagagactggagagcctgggtgcattgacccacggtgacaggagagccaca
gagtccagagacctgagcaaatacaactttgaaaacaagtatggtaccaaggctctagat
aagatcaccaaagccatcctgggtcacattgagagcaaggtgtcccctcccaaaggctac
cctgggggcgatgccgtgttcttcagagacatgaagcatggcatgatggacgtgggcatc
ttctgcaaggagcctcgctttggtctcagtactgagaaagactgcagcatcaccaagttc
ctcaacaggatcctgggcctagaggtccacaagcagaactctctgttccagtacttcact
gacaactttgactacctgatcgaaaaggacaagaaggagggcaaatacgacatgggcatc
ttagatctggccccaggtaatgatgaaatctatgaggagaaacaggagaccttcatgaca
gtgggtaacccccaggacggacaggtcgtgctctacaagatcagcgtggatagagggatg
ccctgggaggaggcctacgagaaggcccagaacctcaacagtcctgacgaaggcttctac
ctctcctacaagttgcgggggaaccacccttgtgtgctgctggcggagcagggccgaggg
aggaacttcatcgtctacaagcccaacatcggcaagcaggcccaccccgagagcctggac
aacctgcagcaacgctaccgcaaggtgaccccagacgaagccaaggacagctgggagagc
cagttcaatttctcctttgggaaatgtagccatgctaactggaacgggaagtgtaagaag
atcgaggagggacaggagtgtctgcagggtatgcgtctgcgccagtaccacatgctgtgc
ggggcgctgctgcgcgtctggaagcgcgtggctgacgtggtctctgacatcaccagctcc
agcatcctgcagatcgtacgcctcaaaaccaaaaatagtaacaagcaagtcggtatcaag
atcccagagaactgcgtggcccgtgtgcgagtggagcttctcaaaatggatgaggaggta
aagaggaggcgcaaggagagggagcagcatgcccaggagcagaggctagccgagcagcgg
cagcttcaggacatacacctgcttgccaagccctacagccagccccacagcctgtctcag
agccacaggactcagaacttctaccagagcctgacccaggccaagcctttacaggtcaag
cctctactacagcccaaacctccacaggtcaaaccccagcccagcccgatcaaccagctt
cccagcatggccagcatcttctcccacttctcccaccacttcccctccctgcccccaatg
cagcccgctccaacctccaccaccaagcctttccgggttggggaggaggtcctggacctg
acggtgagctcctctccctccccagacagcacggagggagtcctgggcctggtcagcctg
acagggggctccgactttgacctggagagactgatatcgcggcacgcactcgccgcccag
aacactgcacacattctgcagcaacctctacagccaccgctgatcaaacagcggcagcta
cagtcgccacagcagatacaaccacagctacagcagtggtcagatcagcctttaatcaac
agcgcccaccaggactactatatccttgaccatccagactctctgccttactctctgtcc
agccagacagctactaaccccgctacctcttctacctcctcctcttcctccaacacagtg
gctcacgtctcgtccggccacctctcgtccccctccaccccctcctctcacttctcctcc
acggccctggccccctcagaacagcagcctctagccaacagccactgcagcacggacaca
ctcatcaacgcgcgcgaggtcctggacaacatgatgcggaccagtgcggaccgccagtcg
gttatccagtaccagccgaacgaatgggactctgcgtaa
DBGET
integrated database retrieval system
