Salvelinus sp. IW2-2015 (Arctic char): 111976153
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Entry
111976153 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: lamin-B2-like
KO
K07611
lamin B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04210
Apoptosis
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111976153
09142 Cell motility
04820 Cytoskeleton in muscle cells
111976153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111976153
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
111976153
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Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
ACBP4_C
Ned1_M
HMMR_N
DUF1326
Motif
Other DBs
NCBI-GeneID:
111976153
NCBI-ProteinID:
XP_023860683
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Position
LG16:complement(41285519..41306861)
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AA seq
604 aa
AA seq
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MATATPSRAAPAGTPLSPTRISRLQEKQDLQHLNDRLAVYIDRVRSLELENDRLMVKVSE
KESVTTREVTGIKTLYEAELADARRVLDETARERARLQIDLGKANSDVEEVTRNLKKKDG
DLALAMARAKDLEAQFNKSEANLATALSENGNLSAEVADLKAQLAKAEDAHSVAKKQLET
ETLMRVDLENRCQSLTEELQFRKSMFDEEVRETRRRREKRTVEVDSGVTQDYTFQLAQAL
QDLRRQHEEQVTIYKEELGNTFQAKLDNAKVSSELNDKAVSTAREELQEAHMRIESLAYQ
LSALQKQASANEERVRELEDLVAGERDKHRRQMDLKEREMAEMRERMQQQLNEYQELLDV
KLALDMEINAYRKLLEGEEDRLKLSPSPSGRVTVSRAMGTSSSRSSWAKRKRVELQEESV
VVPQVHVNQEAEAIGSVTIEETDLEGKCVTLKNDSDKDQSLGSWRLQRQIGEGEEITYKF
SPKFVLKAXKTVTVWGSDAGVSHSPPSDLLWKSQASWGTGDDITTILVNSDGEEVAKRTV
TKTLMEVENGDDDDDFEEEELRGEKASSGNVQSCEEVPIVCSPTKSASFSRATQIFLYNS
VLCF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcaaccccaagccgcgccgcgcctgctggaaccccgctctccccgactagg
atatcgcgcctccaggaaaaacaagacctgcaacatttgaacgacaggcttgccgtttac
atcgaccgagtccggtcactagagctagaaaatgaccggcttatggttaaggtctctgaa
aaggaatcagtcactacacgcgaggtgactgggattaagaccctgtacgaggcagagcta
gcggatgcgcggcgtgttttggatgagacggccagggagagggccaggcttcagatagac
ctgggcaaggccaactctgatgtggaggaggtgaccaggaatctgaaaaagaaagatggc
gacctggctcttgccatggctcgggccaaggaccttgaggcccagttcaacaagagtgaa
gcaaacctggccacggccctcagtgagaatggaaacctgtctgcggaggttgccgacctg
aaggcccagttagccaaggctgaagatgcccattctgtagctaagaagcagctggagacc
gagactctgatgagagtggatctggagaaccgctgccagagcctgacggaggagctgcag
ttcaggaagagcatgtttgacgaggaggtacgtgaaacacgtcgacgtcgcgagaagcgt
accgtggaggtggacagtggggtgacccaggactacacgttccaactggctcaggctctg
caggacctgcgcaggcagcatgaggaacaagtcaccatctacaaggaggagctgggcaac
accttccaggccaagctggataatgccaaggtgtcgtctgagctgaatgacaaggcggtg
agcacagctcgggaggaactgcaggaggctcatatgaggatcgagagcctggcctaccag
ctctctgccctgcagaaacaggcctctgccaatgaggagcgtgtgcgtgagcttgaggac
ctggtggctggagagagggacaagcaccgcaggcagatggacctgaaggagagggagatg
gctgagatgagggagcgtatgcagcagcagctgaacgagtaccaggagctgttggacgtc
aaactggccctggacatggagatcaacgcttacaggaaactgctggagggagaggaggac
agactgaagctgtcccccagcccgtccggccgtgtgacagtgtcccgcgccatgggcaca
agctcttcccgctcctcctgggccaagaggaagcgcgtggagctgcaggaagagtcagtg
gtcgttcctcaggtccacgtcaaccaggaggccgaggccatcggcagcgtcaccatcgag
gagactgacctggagggcaagtgtgtcaccctcaagaacgactcagacaaggaccagtct
ctaggtagctggaggctgcagaggcagattggagaaggagaggagatcacctacaagttc
tcccccaagtttgtcctcaaggctygcaagactgtcacggtgtggggctcagacgcaggt
gtgtctcacagcccaccctctgacctgctgtggaagagccaggcctcctggggcaccggg
gacgacatcaccaccatccttgtgaactctgacggagaggaggtggctaagagaaccgtc
accaagacgttgatggaggtggagaatggagatgatgacgatgacttcgaggaggaggaa
ctgagaggagaaaaggcctcttccgggaatgttcaatcatgtgaagaagttcccatagtt
tgttctcctacaaaatctgcttctttttctagagccactcaaatctttttgtataattct
gtgttgtgtttttaa
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