Salvelinus sp. IW2-2015 (Arctic char): 111976175
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Entry
111976175 CDS
T05762
Name
(RefSeq) mast/stem cell growth factor receptor Kit-like isoform X1
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111976175
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
111976175
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111976175
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
salp04090
]
111976175
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111976175
Protein kinases [BR:
salp01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
111976175
CD molecules [BR:
salp04090
]
Proteins
111976175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR1-3_N_Ig-like
Tlr3_TMD
Motif
Other DBs
NCBI-GeneID:
111976175
NCBI-ProteinID:
XP_023860713
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Position
LG16:26398600..26441171
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AA seq
1004 aa
AA seq
DB search
MEYHWVLFSVLLQLSFQTGSARPTITPRGLHLVIPLNIPFSLLCQGDQVVQWKREDRPKL
RGEERTNGSSVLKIPRAQPGHMGRYICLEERTGEQSSIYVYVKDPDNVFRKTIVFSILTR
AGDSASIPCLATDPRVVNLRLEPCHGGALPNDLHYAASLERGMVIYDTKKAFEGCYICTG
RLGGARVKSHSYDLTVRPVPDVPPVIELRGPKRVVLTRGQNLTLTCSTTNVNGDIKLKWA
APPGTDAVWASYPQQPAVENGSRILTEPITHVRSATLQVNSVGTQNSGRYRCEGQNERGI
SSESIWLDVYDRGFINLAPSDNSSVRVRAGESLSLHVDMEAYPKPHTFSWSFSGQQLRNT
SDHVITKQNHQHRYNSELRLVRLKMSESGVYTFYASNGDATINQSFTVYVISKPEIVSHD
GPVDGQVRCVAEGYPAPQITWYYCEQPYMRCSHQMNATQEEQDIVTVTLLSPSFGKTEVE
SRLNITTGRFHTLECVATVEGEQDFTLFSISERTVPHELFTPLLIGIVSATALLILILIV
LFYKYLQKPKYQIQWKVIEGIHGNNYVYIDPTQLPYDHEWEFPRDKLRFGKTLGSGAFGK
VVEATAYGMSKADTVMTVAVKMLKPSAHATEKEALMSELKVLSYLGNHMNIVNLLGACTV
GGPTLVITEYCCFGDLLNFLRRKRETFFCDTLGEDCYYRNVMLQRETATAWSDGDSRNGY
MDMRPSVAGVLPNGFSSEKRISIRRPGGSSSEPDVVSEMLHEDSLSLDTEDLLSFSYQVA
KGMDFLASKNCIHRDLAARNILLTQGRVAKICDFGLARDITTDSNYVVKGNARLPVKWMS
PESIFECVYTFESDVWSYGILLWEIFSLGSSPYPGMLVDSKFYKMIKEGYRMDAPEFAPS
EMYEIMRSCWDSNPFKRHSFSKVVERIEQQLSDTTKHIYLNFSSRFPVTMGQQVTSVDQG
TQNANILCLNSVGSSNASTQPLLASASDDIFLGEMATGLRVHQV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggaataccactgggtactgttttctgtgttgttgcagttatccttccaaacaggtagc
gccagacccaccatcacccccagaggcctccacctggtcattccactcaacatccccttc
agcctgctttgccagggtgaccaggtggtgcagtggaagcgggaggatcgccccaaactg
aggggcgaggagcggactaatgggtcgtccgtcctgaaaattcccagagctcagcctggc
cacatgggccgatacatctgtctggaggagagaaccggagagcagagctctatctacgtc
tacgtcaaagatcctgataatgtctttagaaagaccattgtgttcagtatcctgactcgt
gcgggagacagtgcctccatcccctgcctagcaaccgacccgagagtggtcaacctgcgc
ttggagccatgccatggcggtgccctccctaatgatctccactatgctgccagcctggag
cggggcatggttatctatgacactaagaaggcctttgagggctgttacatctgcactggc
agactgggcggtgcccgcgttaaatcacacagctatgatctgactgtgcgaccagtccca
gatgtgccccctgtgattgagttgcgtgggcccaagagggtggtcctgacgcggggccag
aatctcaccctgacctgcagcaccaccaacgtcaacggagacatcaagctgaagtgggcc
gctccgccgggcacggatgccgtgtgggcttcgtatccacagcaaccggcagtggagaat
ggctcacgcatcctgactgaacccatcacacacgtccgcagcgctacactccaagtcaac
tctgtcgggacacagaattctgggagatatcgatgtgagggtcagaatgagagggggatc
agctctgagtcaatctggctggacgtctatgatagaggtttcatcaacctggctccgtca
gataacagttctgtgcgtgtgcgtgctggggagagtctgtccctgcatgtggacatggag
gcctatcccaaaccacacaccttctcctggagcttctcaggccagcagctgaggaacacc
tctgatcatgtcatcaccaaacagaaccaccaacacaggtacaacagtgagctcaggctg
gtgcgtttgaaaatgtcagagagtggagtctacaccttttatgcctccaatggtgatgca
acaatcaatcagtcatttaccgtctacgttatcagtaaaccagagattgtatctcatgat
ggcccagttgatggacaggtgcgatgtgtagctgagggataccctgccccacagatcacc
tggtactactgtgaacagccttatatgaggtgctcccaccagatgaacgccactcaggag
gagcaggacattgtcacggtgacgttgttgagtccttcctttgggaagacggaggtggag
agcaggctgaacatcaccacaggaagattccacacgctggagtgtgtggccaccgtggag
ggagagcaggacttcacactgttctctatcagtgaaagaacagttccccatgagctcttc
acacctctgctgattggcatagtgtcagcaaccgccctcctcatcctcatcctcatagtg
ctcttctacaagtacctgcagaaacccaaataccagatccagtggaaagtcattgaaggt
atccacggaaacaactacgtgtatattgaccctacccagctcccatacgatcacgagtgg
gagttcccccgggacaaactgcgtttcgggaaaactctgggctccggagccttcgggaag
gtagtggaggctactgcttatggaatgtccaaagctgatacagtgatgacagtggcggtc
aaaatgctcaaacccagtgcccatgccactgagaaggaggctctgatgtcagagctgaaa
gttctcagttacctgggaaaccacatgaacattgtcaacctgctgggagcctgtactgtt
ggaggcccaaccctggtgatcacagagtattgctgcttcggtgacctcctcaactttctg
agaaggaagagggagacgttcttttgtgacacgttaggggaggactgctactacaggaat
gtcatgctgcagagggagacagctacagcttggtcagatggagacagcaggaatggatac
atggatatgaggccttctgtcgctggtgtcctgcccaatggcttctcctcagagaagaga
atctcgatacgcagaccaggtggttccagtagtgagcctgatgttgtgagtgagatgctc
catgaggacagtctctctctggacactgaggatctgctcagcttctcctatcaagtggcc
aaaggcatggacttcctggcttccaaaaattgcatccacagagacctggctgcccggaac
attctgctgactcaggggcgagtggcaaagatctgtgacttcggcctggcccgtgacatc
accacagactccaactatgtagtcaaaggcaatgctcgcctcccagtcaagtggatgtct
ccagagagcatctttgaatgtgtgtacacatttgagagtgacgtatggtcctatggcatc
ttgctctgggaaatcttctcactcggaagcagtccatatcctgggatgcttgtggactca
aagttctacaaaatgattaaggaaggatatagaatggatgcaccagagtttgcaccgagt
gaaatgtatgagataatgaggtcgtgctgggactcgaacccctttaagagacactccttc
agcaaggtggtggagaggattgaacaacagctgtcagacaccaccaaacacatctatctg
aacttcagctccaggtttccggtcacaatggggcaacaggttaccagtgtggaccagggg
acgcagaatgccaacatcctttgcctcaactctgtgggcagcagcaacgcctccactcag
cccctattggccagcgccagcgatgacatctttctgggggagatggccaccgggctcagg
gtccaccaggtgtaa
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