Salvelinus sp. IW2-2015 (Arctic char): 111976467
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Entry
111976467 CDS
T05762
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111976467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111976467
04090 CD molecules [BR:
salp04090
]
111976467
04091 Lectins [BR:
salp04091
]
111976467
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
SIGLEC family
111976467
CD molecules [BR:
salp04090
]
Proteins
111976467
Lectins [BR:
salp04091
]
I-type lectins (Siglecs)
111976467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
V-set
Ig_5
Ig_4
Ig_CD22
SIT
ICAM_N
Ig_C17orf99
Izumo-Ig
PFF1_TM
MLANA
DUF922
Motif
Other DBs
NCBI-GeneID:
111976467
NCBI-ProteinID:
XP_023861073
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All DBs
Position
LG2:19889173..19891107
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AA seq
464 aa
AA seq
DB search
MCDCVAVVLGQNGWRVTYNPQNICTLKRSTVNLTCSYTYPRGHTVTETSWFYRWSVVKPQ
NDDRVEYYGDRVNDCTLRITDLRESDSAEYWFTFETQIIQGHVFQSVRSESYSGSPGVRL
SVTGLKPTFQTIVTEGQPVTLTCSTTCTLTDNPNPTYIWNKNRQRLTNPKTKNNYLYLDP
VSSEDTGRYSCAVNGHENLPSAEETLTVRYGPKRVSVSVSPSGELVEGSSVTLTCSSDAN
PPVDKYTWYKKNVTQPKASGQSYSITNISSEDSGEYYCEAENTIGAQISTPQLIMVAGKM
CFYFKFQVTLSDNIHIILYALGKQASVKNASIGIIVVVLVLILCLSVLMWFRKKASKSTS
DTRDRRDTVENGQGDSSPVYDNISGMAMTHTAAPTVDTDNQDNVHCASTQHRNQEVPEYS
TAQPSQPQKQEEDVQYAAVKVNHTSTVDMPVETTVVQNTGNTRF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgactgtgttgcagtggtactgggtcagaatggctggagggtgacttacaaccct
cagaatatctgtaccttgaagaggtcaacagtgaatctgacctgctcttacacatatccc
agaggtcatacagtcacagagacatcatggttctatagatggtctgttgtgaaacctcag
aatgatgatcgtgtggaatactatggggacagagtgaacgactgcaccctgagaatcaca
gacctgagagagagcgactcagctgagtactggttcacattcgagactcagatcatacaa
ggtcatgtttttcaaagtgtgagaagtgagagctattctggcagtcctggagtcaggctg
tccgtcacaggcctgaagccaacatttcaaactatagtgacagagggacagcctgtgaca
ctgacctgtagcaccacctgtactctgactgacaaccccaaccccacctacatctggaac
aagaacagacaacgtctcacaaacccaaagaccaaaaataactacttgtacctagaccca
gtcagcagtgaggatacaggcagatactcctgtgctgtaaacggccatgagaatctcccc
tctgctgaagagactctcactgtcagatatggcccaaagagagtgtcagtatcagtcagt
ccttctggtgaactagtggagggcagttcagtgactctgacctgcagcagtgatgccaac
ccacctgtggacaaatacacctggtacaagaagaatgttacccaaccaaaagcgtcaggg
cagagttatagcatcactaacatcagctctgaggacagtggagaatactactgtgaggct
gagaatacaattggagcccagatatctacacctcaattgatcatggtagccggtaagatg
tgtttttattttaaatttcaagttacactatcagataacattcatatcattctttatgct
ttagggaaacaagcttctgtgaagaatgcatctataggaatcatagtggtggttctggtt
ctcatcctctgtctctctgtccttatgtggttcaggaagaaggcctccaaatccacctcc
gacacaagagacagaagagacacagtagagaatggacagggagactctagtcccgtgtat
gacaacatctcaggcatggccatgacccatactgcagcaccgacagtggacacagacaac
caggataacgttcactgcgccagcacccaacacagaaaccaggaagtgcctgaatactcc
actgcccaaccgtctcaaccccagaaacaggaggaggatgtccagtacgctgctgtgaaa
gttaaccacaccagtactgttgacatgccagtagagaccactgtggtacagaacactgga
aacaccaggttttag
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