Salvelinus sp. IW2-2015 (Arctic char): 111976505
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Entry
111976505 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111976505
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111976505
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
111976505
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-GeneID:
111976505
NCBI-ProteinID:
XP_023861130
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All DBs
Position
LG17:complement(2000460..2016869)
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AA seq
656 aa
AA seq
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MGCKHSGQGKWADNGVKGHDLSQLSRREALHFMGGGYEQPITMQIEGRHGRGRRAHHSQY
PMSDCSIQMERPSWEALRAXGVVEGAGPSLGAYAPGPYYDDMPLPPEMYAANGYLSSVAY
NLEDLNRIEYVDDPERCLIGCCNTDXDEPSSFLSQSEYEGHWLDRPMGYLPLHELDSGLG
CTDGSLHHGDLSDPETEEGVEAPMSSPPGHTSRGSSPSSESLLSSEVSDSGFHSVSTGEF
RHFQKIIDGRIQNYRSRVVPREKRSKSRWDLESIPETLTCDPKTGRAPDGAHTFMSHQCP
MRGSSFQIHEAMSPQQTRHGTRSAASSCRTEPCQRRVLMLNQHCSEDLPSRSHTVHDLSD
RRRASHPGLPSGNNAIGIYRHVDRQLPSNPNHLAVPTENSGTGQYNRGFNTDIIEKRTPQ
SSHVEGPWQGLYVEDHRGSMASEDYNSQKQCLSKSPSRKRPGKQLADWRQFATLGHPQIG
GDWPQADGPCGPLYSTLDGLSARSRKGLSGNPRAVRNQLLKARASRLADERSEVTTDEEA
RGDVWAGRYWSRTERRRHLALAREQRQRRLSRGGPEGAAEDGAAGTGGAGGQRGAEGPGG
GCSTVLELSHRKQSRLRNHKLLDDWTTVEELLTHGTRVGEGDNILCHSPLLSVTTV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtaaacactctggacagggcaagtgggctgacaatggggtcaaagggcatgac
ctgtcccagctcagccgccgagaggcgttgcatttcatggggggcggctatgagcagcca
atcacgatgcagattgagggacgacacgggagagggagaagagctcatcactcccagtac
ccaatgtcagactgcagtatccagatggagaggccatcctgggaggctctgagggccrta
ggggtggtggagggggctggacccagccttggtgcctacgctcctggaccttactacgat
gacatgcccctcccaccagaaatgtacgcagccaatggatacctctccagtgttgcctac
aatctggaggaccttaacaggatagagtatgttgacgatccagagcgctgtctgattggt
tgctgtaatactgataamgatgagcctagcagcttcctgagccagagtgagtatgagggc
cactggctggacaggcctatgggctacctgcccctgcacgagcttgacagtggcctgggc
tgcaccgacggcagcctccaccayggggacctgtctgacccagagacagaggagggggta
gaggcccctatgtcctccccaccaggacacaccagccggggcagctctccctcctctgag
tccctcctctcctcagaggtcagtgactctggcttccacagcgtcagcacaggggagttc
cgccacttccagaagattatagacgggaggatccagaactaccggagccgtgtggtcccg
cgggagaagagatcaaagtctcgctgggacctggagtccatccctgagaccctgacttgt
gaccccaagacaggcagggctccagacggagctcacactttcatgagccaccagtgcccc
atgcgtggtagctcctttcagatccatgaagcaatgagcccccagcagaccaggcatggc
accaggtctgctgcctccagctgccgtactgaaccctgccagaggagagtgctgatgctg
aaccagcactgctccgaggacctcccaagccgcagccacactgtgcatgacttatcagac
aggagacgagccagtcaccctggcctgccctctgggaacaatgckatagggatatataga
cacgtagacagacaactgcccagcaacccaaaccacctagccgtgcccactgagaactct
ggcacaggacaatacaacagggggttcaacacagacatcattgagaagagaacgcctcag
agcagccatgtggaaggcccctggcaaggactatatgtggaggaccacagaggcagtatg
gccagtgaggactataacagtcagaaacagtgtctttccaagagtccctcaaggaaacgg
cctgggaagcagctagcagactggcgtcagtttgcaacactgggacatcctcaaattggt
ggggactggccccaagcagatggcccctgtggccccctctacagcacgctggacgggctc
tctgcccgctccaggaagggtctctctgggaacccccgggcagtgaggaaccagctcctg
aaggccagggcctcccggctggctgacgagcgcagtgaggtcaccacggacgaggaggcc
cgcggggatgtctgggcaggccgctactggagtaggactgagcgccggcgccacctggcg
ttggcccgggagcaaaggcagaggaggctgagccgtggtgggcctgagggagcagcagag
gacggggctgcaggaacagggggtgcaggggggcaaaggggtgcagagggccctggagga
ggctgcagcacagtgctggagctcagccacaggaagcagagccgtctgaggaaccataaa
ctgctggatgactggaccacagtggaggagctgctgacacacggcacccgtgtgggggag
ggggataacatcctctgtcacagcccactgctgtcggtcactacagtataa
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