Salvelinus sp. IW2-2015 (Arctic char): 111976589
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Entry
111976589 CDS
T05762
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111976589 (dhx35)
Enzymes [BR:
salp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111976589 (dhx35)
Spliceosome [BR:
salp03041
]
Complex C
Other components
Complex C specific factors
111976589 (dhx35)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
AAA_7
Cas3-like_C_2
AAA_30
PG_binding_1
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
111976589
NCBI-ProteinID:
XP_023861308
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Position
LG17:4290302..4306440
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AA seq
704 aa
AA seq
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MCDVEAKMAAPLSTMKFWKPGSEAPGISEERHVTTETTGSPIIFNPHTALSIEKQRQKLP
VFKHRNNILYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAIS
VANRLAEERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLML
DEAHERTLYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFQEFFNLNETGDPNKDTCGI
LTVEGRTFPVDVFYTVSPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQ
ARALGRLGMKKYLKVLPMYAGLPYTDQMKVFERTPPTVRKVVVATNIAETSITINGIVFV
IDCAFVKLRAYNPCTTIESLVVTPISKASASQRAGRGGRNRAGKCFRLYTEEDFEKLPAS
TVPEMQRTNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGLDQYGRLTD
PMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFMVPANQKKPAAREHRK
FAVAEGDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLQRAMTVREQLRRLMNKFKVPRT
SSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELHIHPNSVLFGEKPTKWVVFNE
VVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHGSLTSKRSRVL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgtagaagccaagatggcggcccccctctccacgatgaaattttggaaaccg
ggttcggaggcccccgggatatcggaggagcggcatgtcacgacagaaacgacaggctcc
cccataattttcaaccctcacaccgcgctgtccatcgagaagcagcgacagaaacttcct
gttttcaagcacagaaacaacatcctttacttggtggagagttaccagacagtgatcatc
gtaggagagacaggatgtgggaagactacacagatcccccagtatttgctggaggctggc
tgggcagctgaggggaaggtgattggtgtgacacagcctcgtagagtggctgctatctca
gtagccaatcgtttggcagaagagcgtggagccctgttggggcatgaggtgggctatacc
attcgctttgatgactgctctgacccccatgccacccgcattaagttcctgacagatggg
atgctggtgagagagatgatggctgatcctctactgaagaagtacagtgtcctaatgctc
gacgaggcccatgaaagaaccctctacacggacatagccatcggcctgctaaagaagatt
cagaagaagcgcagagacctcaggctgatagtggcctctgccactctggatgccaagaaa
ttccaagagttctttaacctgaatgagactggagatcctaacaaggatacgtgtggaatt
ctgacggtggagggacgtaccttccctgttgacgtcttctacactgtcagcccagactat
gtgaaggccacagtggagacggtgctgaagatccatgagactgaggatgatggagatgtt
ctggccttcctcactggacaggaggaagtggagaaggtggtgtctctgctccaggagcag
gccagagctctgggccgtctcggcatgaagaaatacctcaaggtgctgcccatgtacgca
ggcctgccctacactgaccagatgaaggtgtttgagaggacgccccctactgtccgcaag
gtggtggtggccactaacatagcagagacgtccatcaccatcaacggcatcgtgtttgtg
atcgactgtgcgtttgtcaagctgcgggcatacaacccttgcactaccatcgagtcgctg
gtggtcacgcccatctccaaggcctcagccagtcagagggcaggacgagggggacgcaac
cgagccgggaagtgcttcagactatacacagaggaggattttgagaagctgcctgcgtcc
acggttcccgagatgcagcgcaccaacctggcccctgtcatcctgcagctcaaagctctg
ggcatagacaacgtgctgcgattcagctttctctctcctcctccagcccagtccatggtc
caagccctggagctgctctacgccctggggggtctggaccagtatggtcgtctgactgac
cctatgggcgtgcgtatggcagagttccccctcagccccatgtttgccaagatgctgctg
gagtcaggaaactttggctgttccaaggagatcgttaccatagcagccatgatgcagatc
caaaacatcttcatggtgccagccaatcagaagaaaccagcagcgcgggagcatcgcaag
tttgctgtggcggaaggagatcatctcaccatgctcaatgtgtacgaagccttcatcaag
caccagaagagctctcagtggtgtcaggaacacttcctcaactacaagggtctgcagcga
gccatgactgttcgagaacagctcagacgactcatgaataaattcaaggtgccacgcacc
tccagcgaaggtgacccggatgtgatcctgagatgcattgtgtctgggttttttgccaac
gctgcccgcatgcaccactcaggatcctacaggactctacgggatgacagagagcttcac
atccatcccaactctgtgctgtttggagagaagcctacgaagtgggttgtcttcaatgaa
gtcgtgcagacctctaagtactacatgcgtgatgtcacagctgtagagtcctcctggttg
gtcgagcttgctccccacttttacaagcaggctaagcatgggtcattaaccagcaagaga
tccagggtcctctga
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