KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111976589
Entry
111976589         CDS       T05762                                 
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:salp03041]
    111976589 (dhx35)
Enzymes [BR:salp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     111976589 (dhx35)
Spliceosome [BR:salp03041]
 Complex C
  Other components
   Complex C specific factors
    111976589 (dhx35)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N DEAD AAA_22 ABC_tran AAA_19 nSTAND3 AAA_7 Cas3-like_C_2 AAA_30 PG_binding_1 ATPase AAA_23
Other DBs
NCBI-GeneID: 111976589
NCBI-ProteinID: XP_023861308
LinkDB
Position
LG17:4290302..4306440
AA seq 704 aa
MCDVEAKMAAPLSTMKFWKPGSEAPGISEERHVTTETTGSPIIFNPHTALSIEKQRQKLP
VFKHRNNILYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAIS
VANRLAEERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLML
DEAHERTLYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFQEFFNLNETGDPNKDTCGI
LTVEGRTFPVDVFYTVSPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQ
ARALGRLGMKKYLKVLPMYAGLPYTDQMKVFERTPPTVRKVVVATNIAETSITINGIVFV
IDCAFVKLRAYNPCTTIESLVVTPISKASASQRAGRGGRNRAGKCFRLYTEEDFEKLPAS
TVPEMQRTNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGLDQYGRLTD
PMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFMVPANQKKPAAREHRK
FAVAEGDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLQRAMTVREQLRRLMNKFKVPRT
SSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELHIHPNSVLFGEKPTKWVVFNE
VVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHGSLTSKRSRVL
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgtgtgacgtagaagccaagatggcggcccccctctccacgatgaaattttggaaaccg
ggttcggaggcccccgggatatcggaggagcggcatgtcacgacagaaacgacaggctcc
cccataattttcaaccctcacaccgcgctgtccatcgagaagcagcgacagaaacttcct
gttttcaagcacagaaacaacatcctttacttggtggagagttaccagacagtgatcatc
gtaggagagacaggatgtgggaagactacacagatcccccagtatttgctggaggctggc
tgggcagctgaggggaaggtgattggtgtgacacagcctcgtagagtggctgctatctca
gtagccaatcgtttggcagaagagcgtggagccctgttggggcatgaggtgggctatacc
attcgctttgatgactgctctgacccccatgccacccgcattaagttcctgacagatggg
atgctggtgagagagatgatggctgatcctctactgaagaagtacagtgtcctaatgctc
gacgaggcccatgaaagaaccctctacacggacatagccatcggcctgctaaagaagatt
cagaagaagcgcagagacctcaggctgatagtggcctctgccactctggatgccaagaaa
ttccaagagttctttaacctgaatgagactggagatcctaacaaggatacgtgtggaatt
ctgacggtggagggacgtaccttccctgttgacgtcttctacactgtcagcccagactat
gtgaaggccacagtggagacggtgctgaagatccatgagactgaggatgatggagatgtt
ctggccttcctcactggacaggaggaagtggagaaggtggtgtctctgctccaggagcag
gccagagctctgggccgtctcggcatgaagaaatacctcaaggtgctgcccatgtacgca
ggcctgccctacactgaccagatgaaggtgtttgagaggacgccccctactgtccgcaag
gtggtggtggccactaacatagcagagacgtccatcaccatcaacggcatcgtgtttgtg
atcgactgtgcgtttgtcaagctgcgggcatacaacccttgcactaccatcgagtcgctg
gtggtcacgcccatctccaaggcctcagccagtcagagggcaggacgagggggacgcaac
cgagccgggaagtgcttcagactatacacagaggaggattttgagaagctgcctgcgtcc
acggttcccgagatgcagcgcaccaacctggcccctgtcatcctgcagctcaaagctctg
ggcatagacaacgtgctgcgattcagctttctctctcctcctccagcccagtccatggtc
caagccctggagctgctctacgccctggggggtctggaccagtatggtcgtctgactgac
cctatgggcgtgcgtatggcagagttccccctcagccccatgtttgccaagatgctgctg
gagtcaggaaactttggctgttccaaggagatcgttaccatagcagccatgatgcagatc
caaaacatcttcatggtgccagccaatcagaagaaaccagcagcgcgggagcatcgcaag
tttgctgtggcggaaggagatcatctcaccatgctcaatgtgtacgaagccttcatcaag
caccagaagagctctcagtggtgtcaggaacacttcctcaactacaagggtctgcagcga
gccatgactgttcgagaacagctcagacgactcatgaataaattcaaggtgccacgcacc
tccagcgaaggtgacccggatgtgatcctgagatgcattgtgtctgggttttttgccaac
gctgcccgcatgcaccactcaggatcctacaggactctacgggatgacagagagcttcac
atccatcccaactctgtgctgtttggagagaagcctacgaagtgggttgtcttcaatgaa
gtcgtgcagacctctaagtactacatgcgtgatgtcacagctgtagagtcctcctggttg
gtcgagcttgctccccacttttacaagcaggctaagcatgggtcattaaccagcaagaga
tccagggtcctctga

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