Salvelinus sp. IW2-2015 (Arctic char): 111976594
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Entry
111976594 CDS
T05762
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111976594
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111976594
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111976594
Protein kinases [BR:
salp01001
]
Serine/threonine kinases: Other
Other
111976594
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111976594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
WDR55
WD40
LisH
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR19_1st
WAPL
TPR_CCP1_N
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
111976594
NCBI-ProteinID:
XP_023861318
LinkDB
All DBs
Position
LG17:complement(7115546..7139288)
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AA seq
1568 aa
AA seq
DB search
MASASASVDSKAELTALLEHWLEKWEGEQQASTPDLVNILTKISELVERETEEYHKADPD
PFDDRHPGRADPECVLGHLLKILFKDDDFMNALVNSYVMTSRELTLNTAACRLLQNIMPG
LETAVVFQEKEGIVERLFKWAQEAEQPLMIYATGLLAGAMENQDIAANYREENSVLVPLM
LQRLRELQAKDTENRKEFKRPSPRKALGEPLLPLDEETVDGGFEDTPFSSGNNSTERVEK
GPEEGREENPFPPGNNRTEMGPEEDIEENPFPSNESDNSSHKTSSCTSSSIKGQMKPVSA
PQSLSHRDFLDSRAEGSSHLKRRAERENGRKVKQKLNFSLPEPERNFSELSNSSWSEMSP
WVIGNNYHLYPLTPEMEQRLILQYLTPLGEYQELLAVFMQMGACELLIHYMDLKQTNDVQ
LTFEALKYLASLLLHKKFAAQFVAHGGVQKLLEIPKPSMAATGVSLCLYYLAYNQDAMER
VCMLPHSILSDVVSYTLWLLECSHASGCCHATMFFSISFSYRAVLELFDRQDGLRRLVNL
ISTLEILNPEDQAALLSDDQIFSSRQTAKHTCMALRRFFEAHLAIKVEQVKQSLQRTEGG
APIHPQPYYKACSYTHEQVVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACD
WRTYYGRSDTVRYALDILSILTVIPKTQLLMAESVAVPDGEGGNAVSTVGMSVVLLVAEG
EVFVNDAEIQKSALQVVINCVCAPDKRMSSIGKFISGTPRRRLPQTTKSSESVLSKMWNV
VQSNNGIKVLLSLLTVKMPITDADQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQ
LMKEPVLQDKRSEHVKFCKFAAELIKRVSGKPLMIGTDVSLAWLQRANVVAQSRISFPEK
ELLLLIRNHLVAKGLHDTATTLTKEADLPMAILPHPSSSALLPVVVPPPPASPAPALPRT
PRLANGVAARLASHGSHPSMPLSVQPRPSTSQLLALPPAAPPLLTPHQSNGSPLIGRIVF
TRERPSPCPVPASCKKPRVLRQKSDYGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQ
HARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTSRNTRRVVYPKYGGVDGGCFDRHL
IFSRFRPMSVFREADEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHS
SAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGT
KEHIAHIYDIQTGQKTLTLNYPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSARAIHKF
DKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQA
DDDDDIMEMQTKTPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSV
NTDTVCRLYEVGRQRLAEEEEDEDDQEDDDQDDDDDDDDDDSDDDMDTDPLIAELDNDNG
EDEEDEDGNNELSLSDDEVSRLLEGDGEEEEDDDDSDDDEEDGDLALDNTDSSDNSDLED
DIILSLNE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagcgtggattccaaggcagagctgaccgctctgctggagcat
tggttggagaagtgggagggggagcagcaggctagcacaccagacctggttaacatcctc
accaagatctcagagctggtggagagggagactgaggaatatcacaaagctgatcctgat
ccttttgatgacaggcaccctgggagagctgatccagaatgcgtcttgggtcacctgctt
aagatcctgttcaaagatgatgatttcatgaatgcgctggtgaatagctatgtgatgacc
agcagagagctcacccttaacacagcagcctgtcgtttgctgcagaacatcatgcctggg
ttggagaccgctgtggtctttcaggagaaggagggcatagtggagaggctgtttaaatgg
gcccaggaggctgagcaacccctgatgatatatgctacgggcctgctggctggagccatg
gagaaccaggacatcgctgccaactacagggaggagaactcagtcctggtgcctctaatg
ctgcagcggctacgtgagctgcaggccaaggacactgagaacaggaaggagtttaaacgg
cccagtcccaggaaggccctgggggaacctctccttcctctggatgaggagactgtcgac
ggaggtttcgaggacaccccgttctcctctgggaataacagcacggagagggtggagaag
ggaccagaggagggcagagaggagaaccccttccccccagggaataacagaacagagatg
ggaccagaggaggacatagaggagaaccccttccccagcaatgagtctgacaactcttcc
cacaagaccagcagctgcaccagctcgtccatcaaaggccagatgaaacccgtgtctgcc
ccgcagtctctgtcccaccgggacttcctagacagcagggcggagggcagcagtcacctc
aagaggagggcggagagggagaatggacggaaggtaaaacagaagctgaacttctccctg
ccggagccggagaggaacttcagcgagctgtccaacagcagctggtctgagatgagcccc
tgggtgattgggaacaactatcacctttaccctctgaccccggagatggagcagaggctc
atcctacagtacctcacccctctgggggagtaccaggagctgttggctgtcttcatgcag
atgggagcctgtgagctgctcatccattacatggacctgaagcagaccaacgatgtacag
ctcacctttgaggctctcaagtacctggcctccctgctcctgcataagaagtttgcagcc
cagtttgtggcccatggaggagttcagaagcttctggagatccccaagccttccatggct
gccacaggggtgtctctgtgcctctattacctggcctacaaccaggatgccatggaaagg
gtgtgtatgctgcctcactccatcctgtctgacgtggtgagctacactctgtggctgttg
gagtgttcccacgcctcgggctgctgccacgccaccatgttcttctccatctccttctcc
taccgagccgtgctggagctcttcgacaggcaggacggcctccgacgccttgtcaacctg
ataagtacgttggagatcttaaaccctgaagaccaggcggccctgctgagtgatgatcag
atcttctccagcagacagacagccaagcacacctgcatggccctgcgcaggttcttcgag
gcccatctggccatcaaggtggagcaggtcaagcagtccctgcagaggactgaggggggc
gctcccattcaccctcagccctactacaaggcgtgcagctacacccatgagcaggtggtg
gagatgatggagttcctgatcgagtacggaccagtcagattgtactgggagccagctgag
gtcttccacaagctgtcctgtgttcagctgctactacagctcatctccattgcttgtgac
tggaggacctactatggcaggagtgacacagtgcgttatgccctggacatactgagcatc
ctgacggtgatccctaagacccagctgctgatggctgagtctgtggctgtgccagatggg
gaggggggtaacgcagtctccaccgtgggtatgagtgtagtcctgttggtggcggaggga
gaggtgtttgtgaacgacgccgagatccagaagtctgctctgcaggtggtcatcaactgt
gtgtgcgctccggacaaacgcatgtccagcatcggcaagttcatctcgggcactcctcgt
agacgcctgccccagaccaccaagagcagtgagagcgtgctcagcaagatgtggaacgtg
gtgcagtccaacaacggcatcaaggtgctcctgtccctgctgacggtgaagatgcccatc
acagatgcagatcaaatccgtgccctggcctgtaaggctctggtgggtctgtcccgctcc
agctcagtcagacagattatcagcaagctgcctctcttcagcagtggacacatccagcag
ctcatgaaggagcctgtgctccaagacaaacgcagcgaacacgtcaagttctgtaagttt
gcggcagagctcatcaagcgagtgtctggtaaacccctcatgatagggacggatgtctcc
ctggcctggctgcagagggctaatgtggtggcccagtccaggatctccttccctgagaag
gagctactgctgttgatccggaaccacctggtggccaaaggcctgcatgacacggccact
acactcaccaaggaggccgacctccccatggccatcctcccccacccatcttcctcagct
ttacttcctgtcgttgttccccctcctcctgcctctcctgcccctgccctccccaggacc
cctcggctggccaatggggttgcagcgcggttggcgagccacggctctcatccgtccatg
ccgttgtcagttcagccccgtccctcgacatcgcaactcctcgcactccctccggccgcc
cctcccctgttgacccctcaccaaagcaacggttctcccctaattggtcggatcgtgttc
acgcgagagcgcccatcgccgtgccccgtgcctgccagttgtaagaagccgcgggtgctg
aggcagaagtcagattacggtgccttcagccagagtccagccatgaagaaacagctggac
agacacctgccctctccccctgccctggacagcatcatcacagagtacctgagggagcag
cacgcgcgctgcaagaaccctgtcaccacctgcccccctttctccctcttcaccccccac
cagtgccccgaacccaagcagaggcgccaggccccaaccaacttcacctcccgaaacaca
cgcagggtcgtctaccccaagtatggaggggtggacgggggctgcttcgacagacacctc
atctttagcaggtttcgtcccatgtctgtgttcagggaggcagatgaggatgagagtggg
ttcatgtgttgtgccttctctgcccgtgagcggttcctgatgctggggacgtgtacgggc
cagctcaaactctacaatgtgttcacaggccaggaggaggcgagctacagctgccacagc
tctgccatcacacacctagagccatcacgggatggctctctgttgttgacgtcggcatca
tggagttatcctctgtctgcactgtggggcatgaagtcggtgttcatcatgaagcattcc
ttcttagatgatcattatgtggagttcagcaaactctcacaagaccgagttattggcaca
aaggaacacatagctcacatctatgacatccagacggggcagaagaccctgaccctcaac
tacccggacctggccaataactacaagaggaactgtgcgacctttaaccccactgatgac
ctggtgctgaatgacggcgtactgtgggacgtgcgctcggctcgtgccatccacaagttt
gacaagttcaacatgaacatcagtggagtgttccaccccaatggcctggaggtcatcgtc
aacactgaaatttgggacctgcggacttttcacctcctccacacagtgccagctctggac
cagtgtaggatcgtcttcaacaacaacggcacggtcatctacggagcgatgctccaggca
gatgatgatgatgacataatggagatgcagacgaagactccctttggctcctccttcagg
acgttcaacgccaccgactacaaacccattgccaccattgatgtgaagaggaatatcttt
gacctctgcacggacaccaaggactgctacctggctgtgattgagaaccaggactcagtc
aacacagacacggtgtgcagactgtacgaggtgggacgccagagactggctgaagaggag
gaggatgaagacgatcaggaggatgacgatcaagatgatgacgatgatgatgatgatgat
gactctgatgatgacatggacacggaccctctgatcgctgagctggataacgataacggg
gaggatgaggaagacgaagacgggaacaatgaattatctctctccgacgatgaggtgtct
cgcttgctggagggggatggagaggaggaggaggatgatgatgactcggatgacgatgag
gaagatggggaccttgccctggataacacagacagctctgacaactctgaccttgaggat
gacatcatcctgtccctgaatgagtga
DBGET
integrated database retrieval system
