Salvelinus sp. IW2-2015 (Arctic char): 111976627
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Entry
111976627 CDS
T05762
Name
(RefSeq) tubulin alpha-1B chain
KO
K07374
tubulin alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04145
Phagosome
salp04210
Apoptosis
salp04517
IgSF CAM signaling
salp04530
Tight junction
salp04540
Gap junction
salp04814
Motor proteins
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111976627
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111976627
09143 Cell growth and death
04210 Apoptosis
111976627
09144 Cellular community - eukaryotes
04530 Tight junction
111976627
04540 Gap junction
111976627
09142 Cell motility
04814 Motor proteins
111976627
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111976627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111976627
03036 Chromosome and associated proteins [BR:
salp03036
]
111976627
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111976627
04147 Exosome [BR:
salp04147
]
111976627
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111976627
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
111976627
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
111976627
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111976627
Exosomal proteins of other body fluids (saliva and urine)
111976627
Exosomal proteins of colorectal cancer cells
111976627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
111976627
NCBI-ProteinID:
XP_023861381
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All DBs
Position
LG17:complement(27211546..27228437)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RVRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDTVEGDGQEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcatctctatccacgtgggtcaggctggtgtccagattggcaatgcgtgc
tgggagctctactgtctggagcatgggatccagccggatggacagatgccatccgacaaa
gccatcggaggtggagacgactccttcaacaccttcttcagtgagactggggctggaaag
catgttcccagggctgtgtttgtagacctggaacccacagtcatagatgaggtgcgcact
gggacctaccgccagttattccatcctgaacagctcatcactggcaaagaggatgctgcc
aataattacgcccgtggacactacactattggcaaagagatcattgacctggtgctggac
agggtccgcaaactgtctgaccagtgcacaggccttcagggcttcctggtttttcacagc
tttggaggtggcaccggctctggtttcacctctctgctgatggagcgcctgtctgttgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccacagct
gtggtggaaccttacaactccatcctgaccacccacaccaccctagagcactctgactgt
gctttcatggtggataatgaggctatctatgacatctgccgtaggaacctcgacattgag
cgtcccacctacaccaacctcaacaggctcattagccagattgtttcctccattactgct
tcccttcgatttgatggtgctctcaatgttgatttgacagagttccagaccaacttggtg
ccctatccccgaattcattttcctctggccacctatgccccagttatctctgcagagaag
gcttaccatgagcagctctctgtggctgaaatcaccaatgcctgctttgagccggccaat
cagatggtgaaatgtgaccctcgccacggcaagtacatggcatgttgtcttctttaccgt
ggtgatgtggtgccaaaagatgtcaatgctgctattgccaccatcaagaccaaacgttct
attcagtttgttgactggtgcccaactggtttcaaggttggcatcaactatcagcctccc
actgtggtccctggtggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgatcacaagtttgatttgatgtatgct
aaacgtgcctttgtgcactggtatgtgggtgagggcatggaggagggagagttctctgaa
gccagagaggacatggcagccctggagaaggattacgaagaggtgggggttgacaccgtc
gagggtgacggacaggaggagggagaggagtactga
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