Salvelinus sp. IW2-2015 (Arctic char): 111976651
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Entry
111976651 CDS
T05762
Name
(RefSeq) retinoic acid receptor gamma-A-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111976651
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111976651
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111976651
Nuclear receptors [BR:
salp03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
111976651
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111976651
NCBI-ProteinID:
XP_023861419
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Position
LG17:complement(28021418..28082632)
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AA seq
515 aa
AA seq
DB search
MATNRERQVGHMTGFPPAVYPFAFNSMRNHSSFDLLSNSSLFGRFSTDLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEGERPVRNDRNKKKKDVKEELVPPESYE
LSGELEELVNKVSKAHKDTFPSLLQLGKYHTNSSAEQRVQLDLGLWDKFSELSTKCIIKI
VEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHN
AGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAISLISGDRMDLEEPQKVDKLQEPLLEAL
KIYARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEA
FEDQTESSGESSPPPAPPAAPPASTKPPTTMKTEAEDEEDSWGTENGSEPSPEEEDEDDY
DDGEEEDRGSDSEGESWALESSSEGDRKSHAGRAQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggagcggcaggtgggtcacatgacagggtttccaccggctgtctac
ccatttgccttcaactccatgcggaaccactcctcctttgacctgctgtccaatagcagc
ctgtttgggagattcagcaccgacctccctaaagagatggctgcactgtcggtggagacc
cagagcaccagctcagaggagatggttcccagctctccctctccacctcccccgccacgc
atctacaagccctgcttcgtgtgccaggacaagtcctccggctatcactacggggtcagc
tcctgtgagggctgcaagggtttcttccgacgcagtatccagaagaacatggtgtacacc
tgtcaccgagacaagaactgccagatcaacaaggtcaccaggaaccgctgccagtactgc
cgactgcagaagtgcttcgaggtcggcatgtccaaggaaggtgagagaccagtgcgtaac
gacaggaacaagaagaagaaggacgtgaaggaggagttggtgccgccggagagttatgag
ctgagtggcgagctggaggagctggtcaacaaagtcagcaaggcccacaaagacaccttc
ccctcactgctgcagctgggcaaataccacaccaactccagtgcagagcagcgcgtgcag
ctggacctggggctgtgggataagttcagtgagctctccaccaagtgcatcatcaagatc
gtggagtttgccaagcgcctccccggcttcaccaccctcaccatcgctgaccagatcacc
ctcctcaagtcagcctgcctggacatcctgatgttgaggatctgcacgcgctacacccca
gagcaggacaccatgactttctccgacgggctgaccctgaaccggacccagatgcacaac
gcaggcttcggcccgctcacagacctggtgtttgccttcgctggccagctgctgcctctg
gagatggacgacacagagacgggcctcctcagcgccatctccctcatctctggagaccgt
atggacctggaggagccccagaaggtggacaagctgcaggagcccctgctggaggccctg
aagatctacgctcgtcgcagacgccccaacaaaccacacatgttcccccgcatgctgatg
aagatcactgacctcagaggcatcagcaccaagggtgctgagagggccatcactctgaag
atggagatcccaggccccatgcctcctctgatcagagagatgttagagaacccagaggcc
ttcgaggaccagacagagagcagtggagagagctccccaccgcctgcccctcctgccgct
ccaccagcctccaccaagccccccaccaccatgaagactgaggccgaggacgaggaggac
agctgggggacagagaacggaagtgagccctccccagaggaggaagatgaggatgattat
gatgatggggaggaagaggacaggggctcggacagtgagggggaatcctgggctctggag
agtagcagcgaaggggataggaagagccatgctgggagggcgcagtga
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