Salvelinus sp. IW2-2015 (Arctic char): 111976693
Help
Entry
111976693 CDS
T05762
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111976693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111976693
03036 Chromosome and associated proteins [BR:
salp03036
]
111976693
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111976693
Coactivators
SAGA/TFTC/STAGA complex
111976693
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111976693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
111976693
NCBI-ProteinID:
XP_023861490
LinkDB
All DBs
Position
LG17:10436589..10449037
Genome browser
AA seq
977 aa
AA seq
DB search
MRLTSECSRVKMAAGSDLLDDVFFNTEVDEKVVSDLVGSLESELTGPGRGKSSIRVQAAA
NNIDNSAVGRNSNVQDSEMGLSQELAKPGTGVPGGVINSRMSQGSTMYAAVGTTAAGSSM
TAGHSPSKTGAVSGVITGVPDHGAGIRKTGAAGVQTLNGRSVVINSHNSGSVAALVSSAS
STVPAVAVVNNGPSSVVKGNVIIPSTSSTVIQTPLMHNAVTSTVISSQLSVLNSVPTVTL
VRPPMQTPGTVTSQSGSNNTVLIRSVNVAHPASSEAQINKLESPKTTIQTTSQVTAPSVV
GKSLVLQNVRTSIPSTITACPGGIKAIAPQVFSPRLPQPQQNTSNIQNIQLPPGMVLVRS
ESGQLLMIHQQTLAQMQSQSQSAMTPRAATPTSTPPVQITSVQAPGTPMMSRQMTNTITK
QGSPAQTTVQATTTLQRPPVLQQNTIMLGGAAATSGQTPVQPCSAAVTQRAGTPGTPGAP
TVVSTTEILENVKKCKNFLSTLIKLASSGKQSSETTANVKELVKSLLEGKIEAEDFTSQL
YRELNSSPQPYLVPFLKRSLPALRQMTPDSAAFIQQSQLLHAGAQPAASSKALTAVVLGG
TSTAQKSRLNSTSPGTKGTMHQSPVSXLAQTPHSKPGLMVPQQQGAMGRPQVSLAQSPMV
TLRGQPHSHIIMGQPQVVRQLQTVPVVKQALAPGPKVTLGPQSMLSVVLKNRQKEAGGGT
FKDDDDINDVASMGGVNLSEESARILATNSELVGMVTRSCKDEAFLYTSSLTQRVHEIGR
RLGVTDLGPEVINYVSHATQHRLQNLLEKVTVVAQQKSITFKEDDKCEQVSDVRAQLKFF
EQLDQMEKQRKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQELNQIRQKEANMT
ALAAIGPRKKRKMNSPVSGTGAEDLCSGPSPSGGYSSGGSRPQRQRITRVNLRDLLFCLE
NERETSRSHLLFKGFLK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgagcgagtgtagcagagtaaagatggcggcgggctccgatttactggat
gatgttttcttcaacacagaggtggacgagaaagtagttagtgatctagttgggtctttg
gagtctgagctcacgggaccgggtcgtggaaagtcttcaatcagggtccaggctgcagca
aataacattgacaactcagctgtaggtcgcaattccaatgtccaggacagcgaaatggga
ctttcacaagagcttgctaaaccagggactggcgtgccagggggtgtcattaatagtagg
atgtcccagggttcaaccatgtatgctgcggtcgggacaacggcggcgggctcgagcatg
acagccgggcacagtccgagcaagactggggcagtcagtggtgtgataacgggggttccc
gatcacggagctgggatcagaaaaactggggcggctggtgtacaaactttaaatggaagg
agcgttgtgataaactctcataattcaggaagtgttgccgctttggtgagctcggcaagc
agcacagtgcccgccgtcgcggttgtcaacaacggaccgagctccgtggtcaaaggaaac
gtaatcataccctcaacttccagcacagtcattcaaacacctcttatgcacaatgctgtc
acttcaactgtgatatcgtctcagctgtctgttctaaacagtgtgcccactgtcacgctc
gtgaggccgcctatgcaaacccccggaacagtcacatcgcagagcgggagtaataatacg
gttctgatacgatctgtcaacgttgcccaccctgcaagttcagaagcgcaaatcaacaaa
ttggagtcgccaaaaacgaccatacaaacgacttcacaagtgaccgcccccagtgttgta
ggtaaaagcctggttttacaaaatgtgaggacctccatcccatcgactattacagcctgt
cctggtgggataaaggcgatcgcgccacaggtgttctccccgagacttccgcaaccccaa
caaaatacttcaaacatccagaacattcagctccctccaggcatggtgctggtacgcagt
gagagtgggcagcttctgatgatccaccagcagaccctggcccagatgcaatcccagtcc
cagagcgccatgaccccacgggcagccacccccaccagcactccccctgtccagatcact
tctgtacaggctccagggacgcccatgatgtcccgtcagatgaccaacaccatcactaag
cagggctccccggcccagaccaccgtccaggccaccaccaccctccagaggcctcctgta
ctacaacagaacaccattatgctgggtggagcggccgccacctcaggtcagactccagtg
cagccttgctcggcagcagtcacccagagagcagggacccctgggacaccaggcgccccc
acggtcgtttctaccacggagatcctggagaacgtgaagaagtgtaagaacttcttgtcc
acgctgatcaaactggcatccagcgggaagcagtcgtctgagaccacagccaacgtcaag
gagttagtcaagagcctgctggagggtaagatcgaagcggaggacttcaccagtcagtta
taccgggagctcaactcctctcctcagccatatctcgtgcctttcctcaagaggagtctt
cctgcactgcgtcaaatgaccccagactcggcagccttcatccagcagagccagctgctt
cacgctggcgcccagcctgccgcctcctccaaggccttgactgctgtggtgctggggggc
acgtccacggcacagaaatcgcgtctcaacagtaccagccctgggaccaaggggaccatg
caccagtctcctgtcagcagmctggcccagacacctcatagcaagcctggcctgatggtg
cctcagcagcagggggcaatggggaggcctcaggtgtctctggcccagtcacccatggtt
acgctccgaggccagccccacagtcacatcatcatggggcagccgcaggtggtcagacag
ctgcagacagttcctgtagtgaagcaggctctagcaccagggcccaaggtaacacttggg
ccccagtctatgctctctgtagtactgaagaacaggcagaaggaggcaggcggaggaacc
ttcaaggatgatgatgatataaatgacgtggcctctatgggtggagtcaacctatcagag
gagagtgcccgcattctggcaaccaactctgagctggtcggcatggtgactcgctcctgt
aaagacgaggccttcctctacacctcctcactaacccagagagtacatgagataggcagg
aggttaggggtgactgacctggggccggaggtgatcaactacgtttcccatgctacacag
catcggctgcagaacctgctggagaaagtgacggtggtggcgcagcagaaaagcatcacc
ttcaaggaggatgataagtgtgaacaggtgagtgacgtgcgtgcgcagctgaagttcttt
gagcagctggatcagatggagaaacagaggaaggaggagcaggagagagagatcctgatg
aaggcagctaagtctcgatcacgacaagaggacccagaacagcttcggcttaaacagaag
gctaaagagatgcagcagcaggaactgaatcagatcaggcagaaggaggccaacatgacg
gccctggcagccatcggccccaggaagaaaaggaaaatgaactcccctgtcagcggaacc
ggggctgaggacttgtgctctggtccctctccatcaggtgggtacagtagcggaggctcc
aggcctcagcgccagcgcatcacccgggtcaacctcagggacctgctcttctgtctggaa
aatgagagggagaccagccgctcacacctgctctttaaaggcttcctcaaataa
DBGET
integrated database retrieval system
