KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111976881
Entry
111976881         CDS       T05762                                 
Symbol
cacna1d
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010  MAPK signaling pathway
salp04020  Calcium signaling pathway
salp04218  Cellular senescence
salp04260  Cardiac muscle contraction
salp04261  Adrenergic signaling in cardiomyocytes
salp04270  Vascular smooth muscle contraction
salp04530  Tight junction
salp04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    111976881 (cacna1d)
   04020 Calcium signaling pathway
    111976881 (cacna1d)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    111976881 (cacna1d)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    111976881 (cacna1d)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    111976881 (cacna1d)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    111976881 (cacna1d)
   04261 Adrenergic signaling in cardiomyocytes
    111976881 (cacna1d)
   04270 Vascular smooth muscle contraction
    111976881 (cacna1d)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:salp04040]
    111976881 (cacna1d)
Ion channels [BR:salp04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   111976881 (cacna1d)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH CAC1F_C PKD_channel
Other DBs
NCBI-GeneID: 111976881
NCBI-ProteinID: XP_023861797
LinkDB
Position
LG17:12989696..13049615
AA seq 2076 aa
MARGGSAGAQIASSTRAPPLVIRRPSVGSLSQRKRQQYAKSKKQGGSTNSSRPGPCSASP
QQPHRRACISLVEWEPFDIFILLSIFANCVALAVYIPFPEDDSNSTNHDLETVEYAFLII
FTIETFLKIIAYGLVMHQNSYVRNGWNMLDFVIVIVGLFSVVLEVITKEGDAGAQGGKPG
GFDVKALRAFRVLRPLRLVSGVPSLQVVLNAIIKAMVPLLHIALLVLFVIIIYAIIGLEL
FIGKMHATCYLAGTGILAEEEPVPCAMSGHGRQCMMNGTVCREGWHGPNGGITNFDNFLF
AMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKE
REKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENDEEGDEEGVKRNRVTLADLT
EKKKGKFGWFSQSTETQASKPASETESVNTDNPNGEDDKANCCGPLCQKMIKSKYSRRWR
RWNRFCRRKCRVAVKSVSFYWLVIILVFLNTLTISSEHYNQPNWLTEVQDVANKVLLALF
TCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIVETILVELAIMSPLGISVFRCVRLLRI
FKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETITKRS
TFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPFSSGMVVCIYFIILFVCGNYILLNV
FLAIAVDNLADAESLNTAQKEEEEEKERKKSARXLGDDDNDNDNLPEVPVGPRPQRLSDL
SIKEKTPPIPEGSAFFIFSNTNPVRVACHKLINHHIFTNLILVFIMLSSVSLAAEDPIRN
FSARNIILGYFDYAFTAIFTVEILLKMTAFGAFLHKGAFCRNYFNLLDLLVVGVSLVSFG
IQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFAC
IGVQLFKGKFYRCTDEAKSSPEECKGTYILYKDGDTALPAVRERIWYNSDFNFDNVLMAM
MALFTVSTFEGWPALLYKAIDSNRENMGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFV
IVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNLYQYKFWYVVNSTGFEYVM
FVLIILNTLCLAIQHYGQSHLFNYAMDILNMVFTGVFTVEMIFKLIAFKPRXHYFADAWN
TFDALIVVGSVVDIAITEINNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIK
SFQALPYVALLIAMLFFIYAVIGMQVFGKIALVDHTQINRNNNFQTFPQAVLMLFRCATG
EAWQEIMLACLPGKLCDSESDYNPGEEKTCGSGFAIIYFISFYMLCAFLIINLFVAVIMD
NFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHR
VACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTS
MKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGRHSFSSLNSTIALQAG
LRTLHDIGPEIRRVISCDLQDEGLVDMNAEEDDEVSRRNGVLFANHTNHVNADHRGSVTQ
RPLQVPPPSCHAFVEPSQVGSEEGAGDPHPYNHYYPKSPMASNANLNNANISTVPSLTKG
GQRCCLRREHSSANGAPSSSSHHKSVDFDTLTTVQSARSESGGVLYPTIRREKPGGADSD
DDKGSGEYFSGEEYQEDDLMLHKDRMPHKEFQDLQTDLDTNASRGYHQPDSLYDDDQQPI
YQDGGRSPKRRLFPSTPQAPHRPSFNFECLRRHSSQDDDIPLTPSVPHRTALPLHLMQQQ
VMAVAGLDSSRVQRLSPSRSLRSWATPPTSPISRDHSPYYTPLIQVDWRGPGSVSSTPGS
VRRSSWYTDALEAPLSLTYSPSQLQIPPEYRRQYHQKIGSATXLVEAVLISEGLGKYAKD
PKFVAATKHEIADACEMTIDEMESAASNLLNGSMGXWSGGTGATTIGPXSHDYSDEEPDT
SVKCEEDLTDEIICTAPYSSQSHRLTWHSIVVSHIG
NT seq 6231 nt   +upstreamnt  +downstreamnt
atggctagaggaggttctgcaggggcacaaattgccagcagcaccagagcccctcccctg
gtgatacgccggccctctgtaggctcgttgtcacagaggaagaggcaacagtacgccaag
agcaagaagcagggcggctccaccaacagcagccgcccagggccctgttctgcctcacct
caacaaccccatcgcagagcctgcatcagcctggtggagtgggaaccctttgatatcttt
atactgctctctatttttgccaattgtgtggccttagctgtttacatccccttccctgag
gacgactccaactccaccaaccacgacctggaaacagtagaatatgccttcctgatcatc
tttacgatagagacctttctgaagatcatagcgtatggtttagtcatgcatcagaactcc
tacgtaaggaacggctggaacatgctagattttgtcattgttatagtagggttgttcagt
gtagttctggaggtgataaccaaagagggtgatgcgggggctcaggggggtaaaccagga
ggctttgacgtcaaggccctccgagcattccgtgtgctccgccccctccgtcttgtctca
ggagtacccagtttacaggtagtgttgaacgccatcattaaagccatggttcctctgctc
cacatcgctctgctagtcctcttcgtcatcatcatctatgccatcatcggcttggaactc
ttcatcggcaagatgcacgccacctgctacctggcgggcaccggcattctggcagaggag
gagcctgttccgtgtgcaatgtcaggccatgggcgccagtgcatgatgaatgggactgtg
tgtagagagggatggcatggccccaacggtggcatcaccaactttgacaacttcctgttt
gccatgcttactgttttccagtgtatcaccatggagggctggactgatgttctctactgg
atgaatgatgccatgggctttgagctaccctgggtctacttcgtcagtctggtcatcttc
ggctccttcttcgttctcaacctggttctgggagtgttgagcggagagttttccaaggag
agagagaaggccaaggctcgtggagacttccagaagctgagagagaagcagcagctggag
gaggatctgaagggctacctggactggatcactcaggccgaggacatcgaccctgagaat
gacgaggagggggacgaggagggggtcaaacgcaaccgcgtgacactggctgacctaacg
gagaagaagaaagggaagtttggctggttcagccagtccacagagacacaggcaagcaag
cccgccagcgagacagagtctgtgaacactgacaaccccaacggagaggacgataaggct
aactgctgtggaccactctgtcaaaaaatgatcaaatcaaagtacagtcggcgatggcgg
cgctggaaccggttctgccgcaggaagtgtcgtgttgccgtgaagtcagtgtctttctat
tggctggtgatcatcctggtgtttctcaacacgctcaccatctcctcagagcactacaac
cagcctaactggctcacggaagtccaggatgtggccaacaaggttctgctggctctgttt
acgtgtgagatgctggtgaagatgtatagtctgggcctgcaggcctacttcgtgtctctg
ttcaaccgcttcgactgcttcgtggtgtgtggcggcatcgtggagaccatcctggtggag
ctggccatcatgtctcccctgggcatctctgtgttccgttgtgtccgtctgctacgcatc
ttcaaggtcacacgccactgggcatctctcagtaacctggtggcatcgctgctcaactcc
atgaagtccatcgcctccctcctgctcctgctcttcctcttcatcatcatcttctctctg
ttgggcatgcagctcttcggaggcaagttcaacttcgacgagacgataactaagaggagc
accttcgacaacttcccccaggcactactcacagtgtttcagatcctgacaggcgaggat
tggaatgctgtgatgtatgacggcatcatggcgtacggtggacccttctcctcaggcatg
gtcgtctgcatctacttcataatcctctttgtctgtggaaactacatcctgctgaaygtc
ttcttggccatcgccgttgacaacctggcagatgcagagagcctgaacacagcccagaag
gaggaagaggaggagaaggagaggaagaaaagtgccaggtaacttggtgatgatgacaat
gataatgataatctgccagaggttccagttgggccacgcccccaaaggctgtcagacctc
agcatcaaggagaagactccgcccatccctgagggcagtgcattcttcatcttcagcaac
actaacccggttcgggtggcctgccacaagctgatcaaccaccacatcttcaccaacctc
atcctggtcttcatcatgctgagctctgtgtctctggctgctgaggaccctatacgsaac
ttctctgcacgcaacatcatacttggttattttgactatgctttcacggcaatctttact
gttgagatcctattgaagatgacagcttttggggctttcctccataaaggagccttctgc
aggaactacttcaacctgctggacctactggtggttggagtctctctggtgtcctttggc
attcagtcatctgccatctctgtggtgaagatcttgcgtgtgttgagggtgttgcgaccc
ctgagggccatcaacagagccaagggcctcaagcatgtggtccagtgtgtatttgtggcc
atcaggaccattggcaacatcatgatcgtcaccacgctgttacagttcatgttcgcctgc
ataggagtgcagctattcaagggcaagttctatcgctgcacagacgaggccaagtccagc
ccagaggaatgcaaaggcacatacatcctgtataaggatggagacacagcattgcctgca
gttagggagaggatctggtacaacagtgacttcaactttgacaacgtcctcatggccatg
atggctctgttcaccgtctctacatttgaaggctggcctgctctgctctacaaggccatc
gactccaacagagagaatatgggtcccatctacaactaccgcgtggagatctccatcttc
ttcatcatctacatcatcatcatcgccttcttcatgatgaacatctttgttggttttgtc
atcgtcaccttccaggagcagggagagaaagagtacaagaactgtgagctggacaagaac
cagcgtcagtgtgtggagtatgctctgaaggctcgtccactgagaaggtacatccctaag
aacctctaccagtataagttctggtatgtggtcaactccacaggctttgagtacgtcatg
ttcgtcctcatcatcctcaacacactgtgtctggccatccagcactatggccagtctcac
ctgttcaactatgccatggacatcctcaacatggtcttcactggcgtcttcactgtggag
atgatctttaaactcatcgccttcaaacccaggtgacactatttcgccgatgcatggaac
acatttgatgccttaattgttgttggtagcgtcgttgacattgcaatcacagagatcaat
aacactgaggacagcgctcgcatctccatcacattcttccgtctgtttcgagtcatgcga
ttggtcaagctgctcagcagaggggagggcatccgaacgctcctgtggaccttcattaag
tccttccaggctcttccctatgttgcccttctgatagccatgttattcttcatctatgct
gttattggaatgcaggtgtttggaaagattgccttggtagaccacacacagattaaccga
aacaacaacttccagacctttcctcaagctgtcctgatgctcttcaggtgtgctacaggt
gaggcgtggcaggagatcatgctggcatgtctgccagggaagctgtgtgactcagagtca
gactacaaccctggagaggagaaaacatgtggcagcggattcgccattatctacttcatc
agcttctacatgctctgcgccttcctgatcatcaacttgtttgttgctgtcatcatggat
aactttgactatctgacgcgtgattggtccattctgggccctcaccacctggatgagttt
aaaaggatctggtctgagtacgaccctgaggccaagggcaggataaagcatctggatgtg
gtgaccttgctgagacgcatccagcctcctctaggctttggcaagctttgtccacacaga
gtggcctgcaagagactggttgccatgaacatgcccctgaacagtgatggcacggtcatg
ttcaatgccactctgtttgccttggtgaggaccgctctgaagatcaaaactgaaggcaac
ttggaacaggccaatgaggagttgcgagcggtcatcaagaagatctggaagaggaccagc
atgaagctgctggaccaagtggtgccccctgcaggcgatgacgaggtaaccgtggggaag
ttctatgccaccttcctgatacaggactacttcaggaaattcaagaaacgcaaagagcaa
ggcctggtgggaagacactcattctccagcctgaactccaccatcgccctccaggctggc
ctccgcacactgcatgatattgggcccgaaattcgccgagtcatatcgtgtgacctgcaa
gacgaaggccttgtagacatgaatgcagaagaagatgacgaggtgtctaggaggaacggc
gtgctgttcgccaaccacaccaatcacgttaacgcggaccaccggggttctgtcacccag
cggcccctccaggtcccacctccttcctgccacgcattcgtggagccctctcaggttggc
tctgaggaaggggctggtgacccccacccctacaaccactactaccccaaatcccccatg
gcctccaacgccaacctcaacaacgccaacatctccactgtgccctccctgaccaaaggg
gggcagaggtgctgcctccgccgtgagcactcgtctgctaatggggcaccctcctccagc
tcgcaccacaagagtgttgacttcgacaccctcaccacggtccagtctgcaaggtcagaa
tcagggggtgttctgtacccaaccatccgtagagagaagccagggggagcagacagtgat
gatgacaagggctcaggagaatacttcagtggcgaggagtatcaggaggacgacctcatg
ttgcacaaagacaggatgccccataaggagtttcaagaccttcaaactgacttggacaca
aatgcatcgaggggttaccatcaacctgatagtctctatgacgacgaccagcaacccatt
taccaagatggtgggcggtcgccaaagcgacggttgttcccctctacaccccaggcaccc
cacagaccctccttcaactttgagtgtttgcggagacatagcagtcaggatgatgacatc
cccttgaccccttccgttccccatcgaacagctctacccctgcatctgatgcagcaacag
gtgatggcagtggctggcctggactccagcagagtccagcgtctctctccatcacgctct
ctacgttcctgggccacgccccccacctcccccattagcagggaccactccccctactac
acccccctcatccaggtggactggcgtggtcccggcagtgtgagcagcacccctggctct
gtgagaagaagctcctggtacactgacgccctggaagcccctttgagcctcacctactcc
ccctcacagctccagatccccccagagtaccgcaggcagtaccaccagaagataggcagt
gcaacanngctagtagaggccgtgttgatttcagaaggactggggaaatacgccaaggac
cccaaatttgtggcagcgacgaagcatgagatcgcggacgcctgcgagatgaccattgat
gagatggagagtgccgccagcaacctgctgaatggcagtatgggttaatggagcgggggc
accggggccacgacaataggaccgtaatctcatgactacagtgatgaggagccggacacg
agtgtgaaatgtgaagaagatctgactgatgagattatatgcacagcaccctatagcagt
cagtcacataggctgacatggcactctatagtagtcagtcacataggctga

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